prot_H-elongata_contig65895.14173.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig65895.14173.1
Unique Nameprot_H-elongata_contig65895.14173.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length86
Homology
BLAST of mRNA_H-elongata_contig65895.14173.1 vs. uniprot
Match: A0A6H5K7R2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7R2_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 2.710e-17
Identity = 48/86 (55.81%), Postives = 55/86 (63.95%), Query Frame = 0
Query:    1 MNVLCSEINAAPCVIDPI-IEASTCSNGLAGVQQGDVCCSETC-GTCGGKGCSRRWG--GASSCCVGTISKSGVLCSELEAAPCVV 82
            +N LCS  N APCV+DP    ASTC NGLAGVQ G VCC+E C G CGG+GC    G  GA  CC  TI  +GV C E   APC++
Sbjct:  224 VNDLCSVTNEAPCVMDPPDFVASTCPNGLAGVQDGSVCCAEECNGVCGGEGCGSIVGTNGAEDCCSNTILATGVDCEEGVMAPCIM 309          
BLAST of mRNA_H-elongata_contig65895.14173.1 vs. uniprot
Match: A0A6H5JP22_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP22_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 1.270e-16
Identity = 38/67 (56.72%), Postives = 47/67 (70.15%), Query Frame = 0
Query:   17 PIIEASTCSNGLAGVQQGDVCCSETCGTCGGKGCSRRWGGASSCCVGTISKSGVLCSELEAAPCVVD 83
            P++EA TCSNGLAG ++   CCS  CGTCGG+GCS+   GA SCC   I  +G  CSE  AAPC++D
Sbjct:  393 PVMEAQTCSNGLAGYEKSGACCSVGCGTCGGEGCSQLGQGAESCCTSNIIAAGEPCSEKGAAPCIMD 459          
BLAST of mRNA_H-elongata_contig65895.14173.1 vs. uniprot
Match: D7FZV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZV1_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 3.250e-16
Identity = 33/57 (57.89%), Postives = 39/57 (68.42%), Query Frame = 0
Query:   24 CSNGLAGVQQGDVCCSETCGTCGGKGCSRRWGGASSCCVGTISKSGVLCSELEAAPC 80
            C NG+AG+  G  CC+E+CGTCGG GCS R GGA SCC   I ++GVLC    A PC
Sbjct:   23 CGNGVAGIVSGGSCCAESCGTCGGVGCSGREGGAMSCCTSAIERAGVLCDTTSAGPC 79          
BLAST of mRNA_H-elongata_contig65895.14173.1 vs. uniprot
Match: D7G5D5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D5_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 5.850e-15
Identity = 38/78 (48.72%), Postives = 48/78 (61.54%), Query Frame = 0
Query:    5 CSEINAAPCVIDPIIEASTCSNGLAGVQQGDVCCSETCGTCGGKGCSRRWGGASSCCVGTISKSGVLCSELEAAPCVV 82
            CS    APC+ +   E   C  G+ G+QQ DVCCS +CG+CGG GC+ R GG+ +CC G +  SG  CS    APCVV
Sbjct:  193 CSVTGEAPCMTN---EVPMCDGGIVGIQQSDVCCSLSCGSCGGTGCTSRDGGSEACCGGGVRASGRDCSVTGEAPCVV 267          
BLAST of mRNA_H-elongata_contig65895.14173.1 vs. uniprot
Match: A0A6H5JW06_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW06_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 6.930e-15
Identity = 37/70 (52.86%), Postives = 46/70 (65.71%), Query Frame = 0
Query:   18 IIEASTCSNGLAGVQQGDVCCSETCGTCGGKGCSRRWGG--ASSCCVGTISKSGVLCSELEAAPCVVDEE 85
            +  A TC NGLAGV  GD CC+  CGTCGG GCS R  G   + CC   I+++G+LC+E  AAPC+ D E
Sbjct:    4 VTTAQTCDNGLAGVSNGDYCCTLGCGTCGGPGCSTRAEGLDGNDCCTANIAQNGILCAESGAAPCIGDVE 73          
BLAST of mRNA_H-elongata_contig65895.14173.1 vs. uniprot
Match: D7G3T6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T6_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 1.420e-14
Identity = 38/78 (48.72%), Postives = 48/78 (61.54%), Query Frame = 0
Query:    5 CSEINAAPCVIDPIIEASTCSNGLAGVQQGDVCCSETCGTCGGKGCSRRWGGASSCCVGTISKSGVLCSELEAAPCVV 82
            CS    APC+ +   E   C  G+ G+QQ DVCCS +CG+CGG GC+ R GG+ +CC G +  SG  CS    APCVV
Sbjct:  154 CSVTGEAPCMTN---EVPMCDGGIVGIQQSDVCCSLSCGSCGGTGCTSRDGGSEACCGGGVRASGRDCSVTGEAPCVV 228          
BLAST of mRNA_H-elongata_contig65895.14173.1 vs. uniprot
Match: A0A6H5JWJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWJ0_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 2.640e-14
Identity = 39/88 (44.32%), Postives = 49/88 (55.68%), Query Frame = 0
Query:    7 EINAAPCVID-------------PIIEASTCSNGLAGVQQGDVCCSETCGTCGGKGCSRRWGGASSCCVGTISKSGVLCSELEAAPCV 81
            E   APCVID             P  E   C  G+ G+Q  +VCCS +CG+CGG GCS R GG+ +CC G ++ SG LCS    APC+
Sbjct:  109 ECGEAPCVIDASSSTTPAPATPAPTSEVPMCDGGIVGIQAKEVCCSASCGSCGGVGCSGRDGGSDACCGGGVTASGRLCSVTGEAPCI 196          
BLAST of mRNA_H-elongata_contig65895.14173.1 vs. uniprot
Match: A0A6H5KHK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHK8_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 3.800e-14
Identity = 32/64 (50.00%), Postives = 40/64 (62.50%), Query Frame = 0
Query:   20 EASTCSNGLAGVQQGDVCCSETCGTCGGKGCSRRWGGASSCCVGTISKSGVLCSELEAAPCVVD 83
            E   C  G+ G+Q  DVCCS +CG+CGG GC+ R GG+ SCC G +  SG  CS    APC+ D
Sbjct:   55 EVPMCDGGIVGIQASDVCCSASCGSCGGSGCTSRDGGSESCCGGGVRASGRYCSITGEAPCMTD 118          
BLAST of mRNA_H-elongata_contig65895.14173.1 vs. uniprot
Match: D7G4E0_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E0_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 1.300e-13
Identity = 38/91 (41.76%), Postives = 47/91 (51.65%), Query Frame = 0
Query:    5 CSEINAAPCVIDPI--------------IEASTCSNGLAGVQQGDVCCSETCGTCGGKGCSRRWGGASSCCVGTISKSGVLCSELEAAPCV 81
            CS    APC+  P               +E   C  G+ G+Q  DVCCS +CG+CGG GCS R GG+ SCC G +  SG  CS    APC+
Sbjct:  287 CSITGEAPCMTGPAPTPXXXXXXXXXXTVEVPMCDGGIVGIQSSDVCCSASCGSCGGSGCSGRDGGSESCCGGGVRGSGRYCSVTGEAPCM 377          
BLAST of mRNA_H-elongata_contig65895.14173.1 vs. uniprot
Match: A0A6H5K3F5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F5_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 1.440e-13
Identity = 30/64 (46.88%), Postives = 41/64 (64.06%), Query Frame = 0
Query:   19 IEASTCSNGLAGVQQGDVCCSETCGTCGGKGCSRRWGGASSCCVGTISKSGVLCSELEAAPCVV 82
            +E   C  G+ G+Q  DVCCS +CG+CGG GC+ R GGA++CC G +  S   CS    APC++
Sbjct:   32 VEVPMCDGGIVGIQASDVCCSASCGSCGGSGCTGRDGGANACCGGGVRASDRFCSVTGEAPCLL 95          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65895.14173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K7R2_9PHAE2.710e-1755.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JP22_9PHAE1.270e-1656.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZV1_ECTSI3.250e-1657.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5D5_ECTSI5.850e-1548.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JW06_9PHAE6.930e-1552.86WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G3T6_ECTSI1.420e-1448.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWJ0_9PHAE2.640e-1444.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHK8_9PHAE3.800e-1450.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4E0_ECTSI1.300e-1341.76N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A6H5K3F5_9PHAE1.440e-1346.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig65895contigH-elongata_contig65895:2536..3100 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig65895.14173.1mRNA_H-elongata_contig65895.14173.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig65895 2454..3250 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig65895.14173.1 ID=prot_H-elongata_contig65895.14173.1|Name=mRNA_H-elongata_contig65895.14173.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=86bp
MNVLCSEINAAPCVIDPIIEASTCSNGLAGVQQGDVCCSETCGTCGGKGC
SRRWGGASSCCVGTISKSGVLCSELEAAPCVVDEE*
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