prot_H-elongata_contig65862.14170.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig65862.14170.1
Unique Nameprot_H-elongata_contig65862.14170.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length102
Homology
BLAST of mRNA_H-elongata_contig65862.14170.1 vs. uniprot
Match: D8LFP4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP4_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 1.010e-6
Identity = 26/38 (68.42%), Postives = 32/38 (84.21%), Query Frame = 0
Query:    1 MMTSSRSSIDAKYVDMILVLHGNLDFIPEVIVELAASG 38
            MMTSSRS+ DAKYV+M+L LHGN+D +PE+I EL A G
Sbjct:  690 MMTSSRSTGDAKYVEMVLFLHGNVDLLPEIIPELPADG 727          
BLAST of mRNA_H-elongata_contig65862.14170.1 vs. uniprot
Match: A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 1.600e-5
Identity = 25/34 (73.53%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    1 MMTSSRSSIDAKYVDMILVLHGNLDFIPEVIVEL 34
            MMTSSRS++D+KYV+MIL LHGNLD IPE I +L
Sbjct:  421 MMTSSRSTMDSKYVEMILFLHGNLDLIPEDITKL 454          
BLAST of mRNA_H-elongata_contig65862.14170.1 vs. uniprot
Match: A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE)

HSP 1 Score: 51.2 bits (121), Expect = 3.090e-5
Identity = 24/34 (70.59%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    1 MMTSSRSSIDAKYVDMILVLHGNLDFIPEVIVEL 34
            MMTSSRS++D+KYV+MI+ LHGNLD IPE I +L
Sbjct:  648 MMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKL 681          
BLAST of mRNA_H-elongata_contig65862.14170.1 vs. uniprot
Match: A0A6H5L5L6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L6_9PHAE)

HSP 1 Score: 49.3 bits (116), Expect = 3.230e-5
Identity = 26/41 (63.41%), Postives = 29/41 (70.73%), Query Frame = 0
Query:    2 MTSSRSSIDAKYVDMILVLHGNLDFIPEVIVELAASGRSQR 42
            MTSSRS+ DAKYV+MIL LHGNLD IPE I     +  S R
Sbjct:   79 MTSSRSTTDAKYVEMILFLHGNLDLIPEDIPACQPTAPSAR 119          
BLAST of mRNA_H-elongata_contig65862.14170.1 vs. uniprot
Match: D8LBK4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI)

HSP 1 Score: 50.1 bits (118), Expect = 7.820e-5
Identity = 25/34 (73.53%), Postives = 28/34 (82.35%), Query Frame = 0
Query:    1 MMTSSRSSIDAKYVDMILVLHGNLDFIPEVIVEL 34
            MM SSRS+ DAKYV+M+L LHGNLD IPE I EL
Sbjct:  588 MMASSRSAGDAKYVEMVLFLHGNLDLIPEQIPEL 621          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65862.14170.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LFP4_ECTSI1.010e-668.42Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JNY1_9PHAE1.600e-573.53Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JZ82_9PHAE3.090e-570.59Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5L5L6_9PHAE3.230e-563.41Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
D8LBK4_ECTSI7.820e-573.53Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig65862contigH-elongata_contig65862:2115..2420 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig65862.14170.1mRNA_H-elongata_contig65862.14170.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig65862 927..2420 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig65862.14170.1 ID=prot_H-elongata_contig65862.14170.1|Name=mRNA_H-elongata_contig65862.14170.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=102bp
MMTSSRSSIDAKYVDMILVLHGNLDFIPEVIVELAASGRSQRCAKQDFRA
VVQPAAGASRASRCIWPSGPNRGVGGSCIGRGLLKPGSGATRKGAGAGFG
V*
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