prot_H-elongata_contig65802.14165.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig65802.14165.1
Unique Nameprot_H-elongata_contig65802.14165.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length180
Homology
BLAST of mRNA_H-elongata_contig65802.14165.1 vs. uniprot
Match: D8LKP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKP1_ECTSI)

HSP 1 Score: 229 bits (584), Expect = 6.250e-69
Identity = 115/177 (64.97%), Postives = 138/177 (77.97%), Query Frame = 0
Query:    1 MINWHFVMQGILLVSHTFALYLFPFVFLLCTYWFVFFKLQVRCFIFIHCPLK----QGEYFPLEAMVYLMFLIQMCRVGKLLHRQCTSDVFLVDWEKGGRGKGQQAPRGGAPGQEG-VSVWRQLLVANEWNRLGTKRRVNPMTSLIWMTFILGAGRLRYSATPQPDLGNTEVGVCYP 172
            M+NW F+ QG+L+VSHTF L+LFPF FL+ +Y+FVFFKLQ   F+ +    +     GEYFPLE MV +MF+ Q+ RVG L++RQ TSDVFL+DWEK G  KGQQA RGGAP Q G VSVWRQLLVANEWNRLGT+RRVNP+ SL+WM F+LG GRLRY+ATPQPDL +TE G   P
Sbjct:  120 MVNWPFLFQGLLMVSHTFVLFLFPFTFLISSYFFVFFKLQQSVFLMLPADREGYGSTGEYFPLELMVTVMFMFQVLRVGSLVYRQITSDVFLIDWEKDGARKGQQAGRGGAPNQGGGVSVWRQLLVANEWNRLGTRRRVNPVFSLVWMAFVLGGGRLRYNATPQPDLTDTEEGELNP 296          
BLAST of mRNA_H-elongata_contig65802.14165.1 vs. uniprot
Match: A0A7S1TPB6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TPB6_9STRA)

HSP 1 Score: 117 bits (294), Expect = 2.380e-27
Identity = 65/175 (37.14%), Postives = 96/175 (54.86%), Query Frame = 0
Query:    3 NWHFVMQGILLVSHTFALYLFPFVFLLCTYWFVFFKLQVRCFIFIHCPLKQGEYFPLEAMV----YLMFLIQMCRVGKLLHRQCTSDVFLVDWEKGGRGKGQQAPRGGAPGQEGVSVWRQLLVANEWNRLGTKRRVNPMTSLIWMTFILGAGRLRYSATPQPDLGNTEVGVCYPL 173
            ++ F+M+ ++L  H+F +  FP +F LC Y F FFK+Q   ++ +     +    P+  +     +LMF  Q+ R+  L++ QC  +VF VDWEK         P+        VS WRQ+L+ANEWN L TKRR +   +LIW+ F+L    +   ATPQP L +T  GV  PL
Sbjct:  629 SFEFLMRVLVLAMHSFNVTFFPLMFCLCAYLFTFFKMQAEVYLMLPSESAEEGREPISTVFIIFFHLMFFFQLARIIVLVYDQCHVEVFFVDWEK---------PKNA---NHEVSAWRQILIANEWNALQTKRRTSVTATLIWLCFVLIGAGIENVATPQPSLTDTRPGVTNPL 791          
BLAST of mRNA_H-elongata_contig65802.14165.1 vs. uniprot
Match: A0A7S2RCM4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RCM4_9STRA)

HSP 1 Score: 108 bits (270), Expect = 3.980e-24
Identity = 64/172 (37.21%), Postives = 99/172 (57.56%), Query Frame = 0
Query:    3 NWHFVMQGILLVSHTFALYLFPFVFLLCTYWFVFFKLQVRCFIFIHCPLK------QGEYFPLEAMVYLMFLIQMCRVGKLLHRQCTSDVFLVDWEKGGRGKGQQAPRGGAPGQEGVSVWRQLLVANEWNRLGTKRRVNPMTSLIWMTFILGAGRLRYSATPQPDLGNTEVG 168
             W+F    + L+ H + L LFPF+FL CT WFVFFK+Q   ++ +  P K      + EY+  E ++  +F  Q   +  +++ QC +DVF VD E        +   GG+ GQ  VSVWR++ VANEW  L T+RR +   +L+++ F++    L+Y +TPQPD+ N + G
Sbjct:  667 TWYFWCSLVQLL-HCWNLMLFPFIFLYCTSWFVFFKMQDTAYLLL--PPKNEKYGNESEYYLAEVVIICLFWFQSAYLLHIIYLQCNADVFFVDMEN-------KKNSGGSSGQR-VSVWRRIFVANEWAELQTERRTSMTFTLVFLCFVMVGLDLQYLSTPQPDIYNLDRG 827          
BLAST of mRNA_H-elongata_contig65802.14165.1 vs. uniprot
Match: A0A835Z317_9STRA (Transmembrane protein 67-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z317_9STRA)

HSP 1 Score: 107 bits (266), Expect = 1.110e-23
Identity = 60/157 (38.22%), Postives = 90/157 (57.32%), Query Frame = 0
Query:   12 LLVSHTFALYLFPFVFLLCTYWFVFFKLQVRCFIFIHCPLKQ----GEYFPLEAMVYLMFLIQMCRVGKLLHRQCTSDVFLVDWEKGGRGKGQQAPRGGAPGQEGVSVWRQLLVANEWNRLGTKRRVNPMTSLIWMTFILGAGRLRYSATPQPDLGN 164
            L+ +H F   L P  F +C   F  FKLQ + +I +    ++    GEY PL+A+++ +F +Q+  V  +L+ QCT+ VF +DWE+GG+            G  G SVWRQLLVAN+WN L ++RR N   +L+ M F+L     +Y+A P P L +
Sbjct:  121 LIGAHAFVAVLLPLTFAICGALFALFKLQSQVYIVMPADREEYGRKGEYGPLKALLHTLFFLQLVHVLAVLYSQCTATVFFLDWERGGK-----------KGAGGGSVWRQLLVANKWNELQSRRRSNTPLTLLLMVFVLVGLGQQYNAAPWPSLAD 266          
BLAST of mRNA_H-elongata_contig65802.14165.1 vs. uniprot
Match: A0A0L0HPB1_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HPB1_SPIPD)

HSP 1 Score: 106 bits (264), Expect = 2.490e-23
Identity = 61/171 (35.67%), Postives = 96/171 (56.14%), Query Frame = 0
Query:    3 NWHFVMQGILLVSHTFALYLFPFVFLLCTYWFVFFKLQVRCFIFIHCPLKQGEYFPLEAMVYLMFLIQMCRVGKLLHRQCTSDVFLVDWEKGGRGKGQQAPRGGAPGQEGVSVWRQLLVANEWNRLGTKRRVNPMTSLIWMTFILGAGRLRYSATPQPDLGNTEVGVCYPL 173
            +++F+ + IL+++   A  LF F+  +  YWF F+K Q    + +  P    +     A+V    + Q   + K L+ QCT D+F +DWE+  RGK   A   G P    VSVWR + + NEWN++ T RRVN   SL+ M FI+   ++RY+ATPQP++ +   G+  P+
Sbjct:  533 DFNFLSRCILILAGCLAPLLFWFLLAVSAYWFFFYKNQTVMKVLL--PWSDSDLHKFNAIVVATLVCQSAYIIKQLYEQCTIDIFFIDWERS-RGKVMAAGGEGKPRLAAVSVWRSIFMMNEWNKMQTYRRVNIGFSLLAMYFIVEGLKVRYAATPQPNIHDLTPGLVSPI 700          
BLAST of mRNA_H-elongata_contig65802.14165.1 vs. uniprot
Match: F0XYJ9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYJ9_AURAN)

HSP 1 Score: 95.1 bits (235), Expect = 1.990e-19
Identity = 58/151 (38.41%), Postives = 82/151 (54.30%), Query Frame = 0
Query:   23 FPFVFLLCTYWFVFFKLQVRCFIFIHCPL----KQGEYFPLEAMVYLMFLIQMCRVGKLLHRQCTSDVFLVDWEKGGRGK-GQQAPRGGAPGQEGVSVWRQLLVANEWNRLGTKRRVNPMTSLIWMTFILGAGRLRYSATPQPDLGNTEVG 168
            FPFVF+LC+Y+FVFFKLQ   +  +        K  EY+P+   +  M+  Q   V +++ R C  ++F VDWE   +   G+ AP         VSVWR + VANE++ + T RR +    L  + F L A  L  +ATPQPDLG+   G
Sbjct:  664 FPFVFILCSYYFVFFKLQEAAYTLLPAENRHDGKDFEYYPVRTAIISMWAFQTAVVLQIVVRMCQMEIFFVDWEPPRKPDVGKAAP---------VSVWRTIFVANEFSEMMTARRTSTHFVLFCLGFFLVAMGLENNATPQPDLGDLTAG 805          
BLAST of mRNA_H-elongata_contig65802.14165.1 vs. uniprot
Match: A0A7S2WSC8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WSC8_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 3.120e-19
Identity = 49/143 (34.27%), Postives = 81/143 (56.64%), Query Frame = 0
Query:    7 VMQGILLVSHTFALYLFPFVFLLCTYWFVFFKLQVRCFIFIHCPLKQ----GEYFPLEAMVYLMFLIQMCRVGKLLHRQCTSDVFLVDWEKGGRGKGQQAPRGGAPGQEGVSVWRQLLVANEWNRLGTKRRVNPMTSLIWMTF 145
            V++ +  + HT +++ FPF+  +C+++FVFFKLQ   +I +    +      EYF   A + ++F  Q   +  L++RQC  D+F +DWEK    KG+ A          VS+WR ++V NEWNRL + R+ +   +L W+ F
Sbjct:  136 VIKSMSFLCHTISIFGFPFILAICSFFFVFFKLQEDVYIMLPSDSEYYGIGNEYFFFSASIQIIFWSQTVYISHLIYRQCQVDIFFIDWEKS---KGRYAD---------VSLWRMIMVVNEWNRLQSARKTSIEFNLFWIAF 266          
BLAST of mRNA_H-elongata_contig65802.14165.1 vs. uniprot
Match: A0A507CGP8_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CGP8_9FUNG)

HSP 1 Score: 94.4 bits (233), Expect = 3.560e-19
Identity = 55/141 (39.01%), Postives = 78/141 (55.32%), Query Frame = 0
Query:   32 YWFVFFKLQVRCFIFIHCPLKQGEYFPLEAMVYLMFLIQMCRVGKLLHRQCTSDVFLVDWEKGGRGK----------GQQAPRGGAPGQEGVSVWRQLLVANEWNRLGTKRRVNPMTSLIWMTFILGAGRLRYSATPQPDL 162
            Y+ +FFK Q    +F+  P   G+     A +  +F +Q+  V   +++QCT DVF +DWEK  RG           G  A R  AP    VSVWR + +AN+WN L T RRVN    ++W+ F++   R+RY ATPQPD+
Sbjct:  595 YFILFFKGQAGLGVFL--PYSVGDMITFNAALAAIFTLQLMYVIMTVYQQCTIDVFFIDWEKP-RGHTRESAATLLDGSHASRAKAP----VSVWRSVFIANQWNALQTYRRVNLEFCVVWVYFLVEGCRIRYVATPQPDI 728          
BLAST of mRNA_H-elongata_contig65802.14165.1 vs. uniprot
Match: A0A507CNZ5_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CNZ5_9FUNG)

HSP 1 Score: 94.4 bits (233), Expect = 3.680e-19
Identity = 55/141 (39.01%), Postives = 78/141 (55.32%), Query Frame = 0
Query:   32 YWFVFFKLQVRCFIFIHCPLKQGEYFPLEAMVYLMFLIQMCRVGKLLHRQCTSDVFLVDWEKGGRGK----------GQQAPRGGAPGQEGVSVWRQLLVANEWNRLGTKRRVNPMTSLIWMTFILGAGRLRYSATPQPDL 162
            Y+ +FFK Q    +F+  P   G+     A +  +F +Q+  V   +++QCT DVF +DWEK  RG           G  A R  AP    VSVWR + +AN+WN L T RRVN    ++W+ F++   R+RY ATPQPD+
Sbjct:  595 YFILFFKGQAGLGVFL--PYSVGDMITFNAALAAIFTLQLMYVIMTVYQQCTIDVFFIDWEKP-RGHTRESAATLLDGSHASRAKAP----VSVWRSVFIANQWNALQTYRRVNLEFCVVWVYFLVEGCRIRYVATPQPDI 728          
BLAST of mRNA_H-elongata_contig65802.14165.1 vs. uniprot
Match: A0A0H5QQ30_9EUKA (Uncharacterized protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QQ30_9EUKA)

HSP 1 Score: 89.7 bits (221), Expect = 1.350e-17
Identity = 59/159 (37.11%), Postives = 81/159 (50.94%), Query Frame = 0
Query:   26 VFLLCTYWFVFFKLQVRCFIFIHCPLKQGEYFPLEAMVYLMF--LIQMCRVGKLLHRQCTSDVFLVDWEKGGRGKGQQAPRGGAPGQEGVSVWRQLLVANEWNRLGTKRRVNPMTSLIWMTFILGAGRLRYSATPQPDL----GNTEVGVCYPLCFNLG 178
            VF++CTY+ +FFK Q   FI +     Q EY     ++++ F     +CRV   L +Q + D+F +DWEK     G +    GA     VSVWR+L VANEWN L T R VN    LI + F+L    L Y AT QP L    G+  + +      + G
Sbjct:  267 VFIMCTYFLLFFKCQSTAFILLPLEDSQEEYVFTTVVIFVFFGKCFSICRV---LWQQISVDLFFMDWEKPKLVSGNET---GA--SSSVSVWRKLFVANEWNELATARNVNVDLLLIVLLFLLRGINLEYLATSQPSLSLTPGSASINILLRFAVSSG 417          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65802.14165.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKP1_ECTSI6.250e-6964.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1TPB6_9STRA2.380e-2737.14Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S2RCM4_9STRA3.980e-2437.21Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835Z317_9STRA1.110e-2338.22Transmembrane protein 67-domain-containing protein... [more]
A0A0L0HPB1_SPIPD2.490e-2335.67Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
F0XYJ9_AURAN1.990e-1938.41Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2WSC8_9STRA3.120e-1934.27Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A507CGP8_9FUNG3.560e-1939.01Uncharacterized protein n=1 Tax=Synchytrium endobi... [more]
A0A507CNZ5_9FUNG3.680e-1939.01Uncharacterized protein n=1 Tax=Synchytrium endobi... [more]
A0A0H5QQ30_9EUKA1.350e-1737.11Uncharacterized protein n=1 Tax=Spongospora subter... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019170MeckelinPFAMPF09773Meckelincoord: 1..162
e-value: 9.2E-31
score: 106.8
IPR019170MeckelinPANTHERPTHR21274UNCHARACTERIZEDcoord: 2..163
NoneNo IPR availablePANTHERPTHR21274:SF0MECKEL-GRUBER SYNDROME (MKS) HOMOLOGcoord: 2..163
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..55
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 56..74
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..36
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 75..179
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig65802contigH-elongata_contig65802:151..1121 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig65802.14165.1mRNA_H-elongata_contig65802.14165.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig65802 151..1121 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig65802.14165.1 ID=prot_H-elongata_contig65802.14165.1|Name=mRNA_H-elongata_contig65802.14165.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=180bp
MINWHFVMQGILLVSHTFALYLFPFVFLLCTYWFVFFKLQVRCFIFIHCP
LKQGEYFPLEAMVYLMFLIQMCRVGKLLHRQCTSDVFLVDWEKGGRGKGQ
QAPRGGAPGQEGVSVWRQLLVANEWNRLGTKRRVNPMTSLIWMTFILGAG
RLRYSATPQPDLGNTEVGVCYPLCFNLGY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019170Meckelin