prot_H-elongata_contig65797.14164.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig65797.14164.1
Unique Nameprot_H-elongata_contig65797.14164.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length152
Homology
BLAST of mRNA_H-elongata_contig65797.14164.1 vs. uniprot
Match: D7FT29_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT29_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 6.990e-56
Identity = 107/193 (55.44%), Postives = 122/193 (63.21%), Query Frame = 0
Query:    1 MGYFLLLDATDQSITVCWEREAGVSTEAVQMKR----ADDG--------DGAE-----------------------------WTTLSDSLATSALRKRKLPPGTAYVFRRRSRQEQVREWGPWSEASEPFTTLSEGVKQQPPPAVKLREAGALVMEWTSVPEASGYEVQMSASGTRWETIAPSFGSTLLRKKG 152
            M  FLLLDATDQ+IT+CWER   VS E VQMK     A+D         DG+E                             W TLS SL +SALRK+KL PGT YVFRRR+R+++  EWGPWS+ SEPF TLSEG  Q   PAVKLREAGALVMEW +VP ASGYE+QMS SG+ W T+  SFGSTLLRKKG
Sbjct:    1 MATFLLLDATDQAITLCWERGPDVSVEEVQMKMKTTPANDQQRQQQEVKDGSEVGNEVAPSSGSXXXXXXXXXXXXXXXXXDWVTLSKSLGSSALRKKKLAPGTEYVFRRRARKQEEEEWGPWSKTSEPFRTLSEGEMQPSAPAVKLREAGALVMEWPAVPSASGYEIQMSTSGSEWCTLTASFGSTLLRKKG 193          
BLAST of mRNA_H-elongata_contig65797.14164.1 vs. uniprot
Match: A0A835YMB1_9STRA (Thioredoxin-like-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMB1_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.190e-18
Identity = 58/153 (37.91%), Postives = 84/153 (54.90%), Query Frame = 0
Query:    5 LLLDATDQSITVCWEREAGVSTEAVQMKRADDGDGAEWTTLSDSLATSALRKRKLPPGTAYVFRRRSRQEQVREWGPWSEASEPFTTLSEGVKQ-QPPPAVKLREAGALVMEWTSVPEASGYEVQMS----ASGTRWETIAPSFGSTLLRKKG 152
            +LLDA   +++V W  E G +    Q++      G EWT LS +L ++ LRK+ L PG  Y FR R+  + + E G  SEASE FTTLSEG  + Q  P +   EA AL ++W +V     YE+QM+         W T+A +  + + +KKG
Sbjct:    5 VLLDAGADTLSVHWRAEKGAALYEAQLEDTSSSPG-EWTLLSSTLQSTRLRKKNLVPGRTYRFRVRA-IDSLGESGRLSEASEAFTTLSEGTNRIQESPQMVRSEAEALTVQWKAVDACEAYELQMALWVEGEALAWTTVAAAVKAPIAKKKG 155          
BLAST of mRNA_H-elongata_contig65797.14164.1 vs. uniprot
Match: A0A7S4K6K6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K6K6_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 1.920e-15
Identity = 57/157 (36.31%), Postives = 80/157 (50.96%), Query Frame = 0
Query:    5 LLLDATDQSITVCWEREAGVSTEAVQMKRADDGD-GAEWTTLSDSLATSALRKRKLPPGTAYVFRRRSRQEQVREWGPWSEASEPFTTLSEGVKQQPPPAVKLREAGALVMEW---TSVPEAS----GYEVQMSAS--GTRWETIAPSFGSTLLRKK 151
            +LLDATD S+TV W   AG     +Q +R  D + G ++ TLS++L ++  RKR LPP +A+ FR RS      EW    E+    T   + ++ + P A       A+V  W   T   EA     GYE+QM  +  G  W T+AP  G   +RKK
Sbjct:    6 VLLDATDDSLTVSWPSVAGADRYVLQYRRESDSEEGGDYETLSENLKSTQARKRNLPPESAFSFRARSSSGADGEWIGHEESFRLLTAAEQALRMEAPTATADGNQAAVV-RWKAPTGGAEAGTSVDGYELQMRENDGGRGWCTVAPRLGGIEVRKK 161          
BLAST of mRNA_H-elongata_contig65797.14164.1 vs. uniprot
Match: L1IDF0_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IDF0_GUITC)

HSP 1 Score: 71.6 bits (174), Expect = 7.000e-12
Identity = 43/152 (28.29%), Postives = 77/152 (50.66%), Query Frame = 0
Query:    1 MGYFLLLDATDQSITVCWEREAGVSTEAVQMKRADDGDGAEWTTLSDSLATSALRKRKLPPGTAYVFRRRSRQEQVREWGPWSEASEPFTTLSEGVKQQPPPAVKLREAGALVMEWTSVPEASGYEVQM-SASGTRWETIAPSFGSTLLRKK 151
            M + ++ D   +++T+ W +        VQ+K+ + GD   +TT+SDSL ++ +RK+ L P T Y  R R R     +W  + E     T   + VK+   P V  R+  ++ ++W + P+   Y V++ S     W TI+    + ++RKK
Sbjct:    1 MQWCVVHDVEAEAVTLSWSKVPNAVKYEVQIKQEEGGD---FTTISDSLTSTLVRKKNLKPNTEYFARVRHRD--ALDWSGFCEPVSFHTLAGQDVKRLEHPQVVSRDGESITLQWPTAPDCESYTVEIRSDKDPTWRTISDHLKNNIVRKK 147          
BLAST of mRNA_H-elongata_contig65797.14164.1 vs. uniprot
Match: A0A7S0E8P9_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E8P9_9CRYP)

HSP 1 Score: 63.2 bits (152), Expect = 6.750e-9
Identity = 43/125 (34.40%), Postives = 68/125 (54.40%), Query Frame = 0
Query:   29 VQMKRADDGDGAEWTTLSDSLATSALRKRKLPPGTAYVFRRRSRQEQVREWGPWSEASEPFTTLSEG-VKQQPPPAVKLREAGALVMEWTSVPEASGYEVQM-SASGTRWETIAPSFGSTLLRKK 151
            VQ+K+ D GD   +TT+SDSL ++ +RK+ L P T Y  R R R     +W  + E   PF TL+   V +   P +  ++A +L ++W +VP+   Y V+M S     W  I+    + ++RKK
Sbjct:    6 VQIKQEDGGD---FTTISDSLTSTLVRKKNLKPNTQYFARVRHRD--ALDWSNFCEPV-PFQTLTGAEVNRLENPKIVSKDAESLTVQWPTVPDCESYTVEMRSDKEPLWRPISDHLKNNIVRKK 124          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65797.14164.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FT29_ECTSI6.990e-5655.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YMB1_9STRA1.190e-1837.91Thioredoxin-like-domain-containing protein n=1 Tax... [more]
A0A7S4K6K6_9STRA1.920e-1536.31Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
L1IDF0_GUITC7.000e-1228.29Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
A0A7S0E8P9_9CRYP6.750e-934.40Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 4..98
e-value: 5.9E-8
score: 34.7
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 1..94
score: 10.785
IPR036116Fibronectin type III superfamilySUPERFAMILY49265Fibronectin type IIIcoord: 7..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig65797contigH-elongata_contig65797:218..1981 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig65797.14164.1mRNA_H-elongata_contig65797.14164.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig65797 218..1981 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig65797.14164.1 ID=prot_H-elongata_contig65797.14164.1|Name=mRNA_H-elongata_contig65797.14164.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=152bp
MGYFLLLDATDQSITVCWEREAGVSTEAVQMKRADDGDGAEWTTLSDSLA
TSALRKRKLPPGTAYVFRRRSRQEQVREWGPWSEASEPFTTLSEGVKQQP
PPAVKLREAGALVMEWTSVPEASGYEVQMSASGTRWETIAPSFGSTLLRK
KG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR003961FN3_dom
IPR036116FN3_sf