prot_H-elongata_contig65782.14160.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig65782.14160.1
Unique Nameprot_H-elongata_contig65782.14160.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length91
Homology
[Close]
BLAST of mRNA_H-elongata_contig65782.14160.1 vs. uniprot
Match: A0A6H5JSE0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JSE0_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 1.980e-38
Identity = 72/91 (79.12%), Postives = 81/91 (89.01%), Query Frame = 0 
Query:    1 MAFFQGGLEIFRQQEKGMRRRQVLLDRINRRYDADNALWAYVRSRLEAELMGALPPPGAPPGARAPINPRASCPVYVAELTTEILSADSQE 91
            +AFFQGG  I  + EK MRRRQV+LD +N+R+D DNALWAYVRSRLEAEL GALPPPGAPPGARAP+NPRA+CPVYVAELTTE+LSA SQE
Sbjct:  349 LAFFQGGGSICGEMEKSMRRRQVVLDGMNKRHDRDNALWAYVRSRLEAELQGALPPPGAPPGARAPVNPRAACPVYVAELTTEVLSAASQE 439
[Close]
BLAST of mRNA_H-elongata_contig65782.14160.1 vs. uniprot
Match: A0A7S2GJK9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GJK9_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 6.930e-6
Identity = 26/68 (38.24%), Postives = 40/68 (58.82%), Query Frame = 0 
Query:    3 FFQGGLEIFRQQEKGMRRRQVLLDRINRRYDADNALWAYVRSRLEAELMGALPPPGAPPGARAPINPR 70
            +F  G  +    +K   + +  L     +Y  +   W  +R+RLEAEL+G+ PPPGAP GA++PI+PR
Sbjct:  108 YFHSGDALISSVQKSTEKTKKALTLALSQYVEEGGAWDRMRNRLEAELLGSQPPPGAPEGAQSPISPR 175
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65782.14160.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JSE0_9PHAE1.980e-3879.12Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2GJK9_9STRA6.930e-638.24Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig65782contigH-elongata_contig65782:57..3154 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig65782.14160.1mRNA_H-elongata_contig65782.14160.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig65782 51..3154 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig65782.14160.1 ID=prot_H-elongata_contig65782.14160.1|Name=mRNA_H-elongata_contig65782.14160.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=91bp
MAFFQGGLEIFRQQEKGMRRRQVLLDRINRRYDADNALWAYVRSRLEAEL
MGALPPPGAPPGARAPINPRASCPVYVAELTTEILSADSQE
back to top