prot_H-elongata_contig6565.14147.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6565.14147.1
Unique Nameprot_H-elongata_contig6565.14147.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length444
Homology
BLAST of mRNA_H-elongata_contig6565.14147.1 vs. uniprot
Match: A0A6H5JZI7_9PHAE (SCP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZI7_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 1.450e-45
Identity = 91/152 (59.87%), Postives = 108/152 (71.05%), Query Frame = 0
Query:  300 DMEMLLEMHNLARCEHNADPLTWSDTVAASAAEYAQVLADACGS-LVHSDSI----YGENLYMCYGSTSCYSPERAMEGLYEEEINSSSIDGYGGHATQILWKSTTELGCALAYC--GDRTY--LVCQYNPPGNYIGMYDENVEVA-AGNGC 441
            DM  L+++HN ARC HNADPLTWS TVA+SAAE+A+ L   C S L HS       YGENLYMC+GS SCYS ERAMEGLY +E+ S S+  YGGHATQILWKST ++GC +A C  G   Y  LVCQY+PPGNY G Y+E V +  +G  C
Sbjct:  240 DMTELVDLHNEARCVHNADPLTWSSTVASSAAEHAERLTAQCSSNLFHSTQEQRYGYGENLYMCWGSDSCYSHERAMEGLYYDEVQSDSVLQYGGHATQILWKSTEQVGCVVARCTNGGTPYMFLVCQYDPPGNYGGQYEEQVGLPDSGKSC 391          
BLAST of mRNA_H-elongata_contig6565.14147.1 vs. uniprot
Match: D8LJX3_ECTSI (Pathogenesis-related protein, class 1 n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJX3_ECTSI)

HSP 1 Score: 169 bits (429), Expect = 8.290e-44
Identity = 87/152 (57.24%), Postives = 108/152 (71.05%), Query Frame = 0
Query:  300 DMEMLLEMHNLARCEHNADPLTWSDTVAASAAEYAQVLADACGS-LVHSDSI----YGENLYMCYGSTSCYSPERAMEGLYEEEINSSSIDGYGGHATQILWKSTTELGCALAYCGDR----TYLVCQYNPPGNYIGMYDENVEVA-AGNGC 441
            DM  L+++HN ARC HNADPLTWS TVA+SAAE+A+ L   C S L HS       YGENLYMC+GS SCYS E+AMEGLY +E+   S+  YGGHATQILWK+T ++GC +A C +     T+LVCQY+PPGNY G Y+E V +  +G  C
Sbjct:  341 DMTELVDLHNEARCVHNADPLTWSSTVASSAAEHAERLTAQCSSSLFHSTQEQRYGYGENLYMCWGSDSCYSHEKAMEGLYYDEVQFDSVLQYGGHATQILWKATEQVGCVVARCTNGGTPYTFLVCQYDPPGNYGGQYEEQVGLPDSGKSC 492          
BLAST of mRNA_H-elongata_contig6565.14147.1 vs. uniprot
Match: A0A6H5JCL1_9PHAE (SCP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCL1_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 5.160e-37
Identity = 116/355 (32.68%), Postives = 164/355 (46.20%), Query Frame = 0
Query:   97 HIGCFQIDEE---IVAGYGASNFSYSSEMSTSQCYKKCSRRGATFMALANGFICWCGCGEEDEYSQGGVGMCDTPCWGDEDMMCGGEEAFDLYHIEEGEMAHSSM------ASTSSPMPPPMENKTNEMGTSTFSHMSTGDEFEPLPTRGPVSMMSSQEIPTPPSIETQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMEMLLEMHNLARCEHNADPLTWSDTVAASAAEYAQVLADAC-GSLVHSDSI----YGENLYMCYGSTSCYSPERAMEGLYEEEINSSSIDGYGGHATQILWKSTTELGCALAYCGD----RTYLVCQYNPPGNYIGMYDENV 433
            ++GCFQ DE+   +  G+ +  F+        +C+  C+  GATF+ L  GF C C  G+E++Y+  G G  +   W           AFDLY +  G+ + +S+      +ST  PMP           TS+  H        P+  R P  ++        PS   +                                                  ++  + C HNADPLTWS TVA+SAAE+A+ L   C  SL HS       YG NLY+ +GS SCYS ++A +GLY +E+ S S+  YGGHATQILWK+  ++GCA A C +      +LVCQY+PPGN  G Y+E V
Sbjct:   81 YVGCFQDDEQSTLLEFGFISGGFN------VERCFMHCTDEGATFLGLKYGFQCSCDFGQEEDYTLNGPG--ERLRW-----------AFDLYSLGGGDDSSTSVTSLPTASSTGFPMPTXXXXXXXXPSTSSLWH--------PV-LRCPRLLLLRDHSDVFPSFPPR-------------------------------------------------HLYTTSWCVHNADPLTWSSTVASSAAEHAEGLTAQCFSSLFHSTQEQRYGYGANLYIRWGSDSCYSHKKATKGLYYDEVQSDSVLQYGGHATQILWKAAEQVGCAGARCTNGGTPHAFLVCQYDPPGNSGGQYEEQV 358          
BLAST of mRNA_H-elongata_contig6565.14147.1 vs. uniprot
Match: A0A6H5KK50_9PHAE (SCP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK50_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 1.430e-36
Identity = 78/149 (52.35%), Postives = 97/149 (65.10%), Query Frame = 0
Query:  300 DMEMLLEMHNLARCEHNADPLTWSDTVAASAAEYAQVLADAC-GSLVHSDSI----YGENLYMCYGSTSCYSPERAMEGLYEEEINSSSIDGYGGHATQILWKSTTELGCALAYCGDR----TYLVCQYNPPGNYIGMYDENVEVAAGN 439
            DM  LL++HN ARC H ADPL WSD V +SAAE+A  L D C  SL HS +     YGENL+MC+G+ +CY+ E AME LY EE+   ++  Y GHATQILWKST ++GC LA C +     T+LVCQY+P GN  G  +   EV   N
Sbjct:   79 DMTGLLDLHNEARCVHGADPLGWSDPVTSSAAEHAARLTDQCTSSLFHSTTDQRYGYGENLFMCWGTDTCYNHEYAMEKLYVEEVQFGAVTDYIGHATQILWKSTKKVGCVLAQCTNGGTPYTFLVCQYDPAGNMGGDKEYIEEVGLPN 227          
BLAST of mRNA_H-elongata_contig6565.14147.1 vs. uniprot
Match: D8LJW7_ECTSI (Pathogenesis-related protein, class 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJW7_ECTSI)

HSP 1 Score: 139 bits (350), Expect = 4.840e-34
Identity = 75/145 (51.72%), Postives = 94/145 (64.83%), Query Frame = 0
Query:  300 DMEMLLEMHNLARCEHNADPLTWSDTVAASAAEYAQVLADAC-GSLVHSDSI----YGENLYMCYGSTSCYSPERAMEGLYEEEINSSSIDGYGGHATQILWKSTTELGCALAYCGDR----TYLVCQYNPPGNYIGMYDENVEV 435
            DM  LL++HN ARC H+ADPL WSD V +SAAE+A  L D C  SL HS       YGENL++C+G+ +CY+ + AME LY EE+    +  Y GHATQILWKST  +GC LA C +     T+LVCQY+P GN  G  +   EV
Sbjct:  166 DMAGLLDLHNEARCVHSADPLGWSDPVTSSAAEHAVRLTDQCTSSLFHSTREQRYGYGENLFVCWGTDTCYNHDYAMEHLYVEEVQFDDVTDYIGHATQILWKSTKNVGCVLAGCSNGGTPYTFLVCQYDPAGNMGGDDEYRQEV 310          
BLAST of mRNA_H-elongata_contig6565.14147.1 vs. uniprot
Match: A0A8E6Y896_MONPR (Pathogenesis-related protein 1 n=1 Tax=Moniliophthora perniciosa TaxID=153609 RepID=A0A8E6Y896_MONPR)

HSP 1 Score: 115 bits (287), Expect = 7.230e-27
Identity = 65/137 (47.45%), Postives = 84/137 (61.31%), Query Frame = 0
Query:  300 DMEMLLEMHNLARCEHNADPLTWSDTVAASAAEYAQVLADACGSLVHSDSIYGENLYMCYGSTSCYSPERAMEGLYEEEINSSSIDG-YGGHATQILWKSTTELGCALAYCGDRTYLVCQYNPPGNYIGMYDENVEV 435
            D++  L+ HN  R +HNA+PLTW++ VAA+A    Q  AD C ++ HS   YGENL    GS     P  A   L+ +E++    +     H TQ++WKSTTELGCA+A C   TY VC YNPPGN IG + ENVEV
Sbjct:   28 DIDQWLDAHNEVRAQHNAEPLTWNNQVAATA----QSWADQC-TMEHSGGQYGENLAWGGGSF----PIPAAVKLWADEVSEYDPNNPQYSHFTQVVWKSTTELGCAVADCSGTTYHVCSYNPPGNVIGQFPENVEV 155          
BLAST of mRNA_H-elongata_contig6565.14147.1 vs. uniprot
Match: A0A0W0G968_9AGAR (Pathogenesis-related protein 1 n=10 Tax=Moniliophthora TaxID=221102 RepID=A0A0W0G968_9AGAR)

HSP 1 Score: 110 bits (274), Expect = 5.060e-25
Identity = 62/137 (45.26%), Postives = 80/137 (58.39%), Query Frame = 0
Query:  300 DMEMLLEMHNLARCEHNADPLTWSDTVAASAAEYAQVLADACGSLVHSDSIYGENLYMCYGSTSCYSPERAMEGLYEEEINSSSIDG-YGGHATQILWKSTTELGCALAYCGDRTYLVCQYNPPGNYIGMYDENVEV 435
            D++  L  HN  R +HNA PLTW+D VAA+A  +    A+ C ++ HS   YGENL    GS     P  A   L+ +E++    +     H TQ++WKSTTELGC +A C   TY VC YNPPGN IG +  NVEV
Sbjct:   28 DVDQWLNAHNEVRVQHNAQPLTWNDQVAATAQNW----ANRC-TMQHSGGQYGENLAWGTGSF----PISAAVKLWADEVSEYDPNNPQYSHFTQVVWKSTTELGCGVADCSGTTYYVCNYNPPGNVIGQFPGNVEV 155          
BLAST of mRNA_H-elongata_contig6565.14147.1 vs. uniprot
Match: A0A6H5KE93_9PHAE (SCP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE93_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 7.250e-25
Identity = 64/140 (45.71%), Postives = 86/140 (61.43%), Query Frame = 0
Query:  301 MEMLLEMHNLARCEHNADPLTWSDTVAASAAEYAQVLADA--CGSL--VHSDSIYGENLYMCYGSTS----------CYSPERAMEGLYEEEINSSSIDGYGGHATQILWKSTTELGCALAYCGDR--TY--LVCQYNPP 422
            ++ LLE+HN ARC H   PL +++ VAA+A  YA VLA    CGS    HS  + GEN+++C  S+S          C+SPE AME  Y+ ++   S   YG +ATQ+LWKSTT++GCAL  C     TY  LVC+Y+PP
Sbjct:   84 LDRLLELHNAARCMHATGPLEFAEPVAATAKTYADVLASESMCGSAEAAHSTGL-GENVFVCAASSSFSGNGAPTSACFSPEIAMEAFYDSQVGGGSTSTYGPYATQVLWKSTTQIGCALRACEKEGLTYDILVCRYSPP 222          
BLAST of mRNA_H-elongata_contig6565.14147.1 vs. uniprot
Match: D8LQY8_ECTSI (SCP-domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY8_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 1.910e-23
Identity = 62/140 (44.29%), Postives = 84/140 (60.00%), Query Frame = 0
Query:  301 MEMLLEMHNLARCEHNADPLTWSDTVAASAAEYAQVLADA--CGSL--VHSDSIYGENLYMCYGSTS----------CYSPERAMEGLYEEEINSSSIDGYGGHATQILWKSTTELGCALAYC--GDRTY--LVCQYNPP 422
            ++ LLE+HN ARC H   PL +++ VAA+A  YA +LA    CGS    HS  + GEN+++C  S+S          C+SPE AME  Y+ ++       YG  ATQ+LWKSTT++GCAL  C     TY  LVC+Y+PP
Sbjct:  101 LDRLLELHNAARCMHATGPLEFAEPVAATAKTYADLLASESMCGSAETAHSTGL-GENVFVCAASSSLSGDGAPTAACFSPESAMEAFYDSQVGGGPTSTYGPRATQVLWKSTTQIGCALRACEKDGLTYDILVCRYSPP 239          
BLAST of mRNA_H-elongata_contig6565.14147.1 vs. uniprot
Match: A0A7H4K672_9HYPH (SCP-like extracellular n=1 Tax=Oricola sp. TaxID=1979950 RepID=A0A7H4K672_9HYPH)

HSP 1 Score: 100 bits (249), Expect = 9.360e-22
Identity = 58/137 (42.34%), Postives = 73/137 (53.28%), Query Frame = 0
Query:  301 MEMLLEMHNLARCEHNADPLTWSDTVAASAAEYAQVLADACGSLVHSDSIYGENLYMCYGSTSCYSPERAMEGLYEEEIN----SSSIDGYGGHATQILWKSTTELGCALAYCGDRTYLVCQYNPPGNYIGMYDENV 433
            M+ +L  HN  R  H    LTWS  +AA A    Q  A+ C   VHS S YGENL+M  G+   YSP + ++  Y E  N         G  GH TQI+WKS+++LGC  A C      VC Y PPGNY G + +NV
Sbjct:    1 MQQVLSAHNNHRDRHCVPALTWSPALAAQA----QAWANQCN-FVHSSSGYGENLWM--GTAGYYSPTQVVDSWYAEIANYQYSQPGFSGSTGHFTQIVWKSSSQLGCGRATCQGNDLWVCNYAPPGNYQGQFPQNV 130          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6565.14147.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZI7_9PHAE1.450e-4559.87SCP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LJX3_ECTSI8.290e-4457.24Pathogenesis-related protein, class 1 n=3 Tax=Ecto... [more]
A0A6H5JCL1_9PHAE5.160e-3732.68SCP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KK50_9PHAE1.430e-3652.35SCP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LJW7_ECTSI4.840e-3451.72Pathogenesis-related protein, class 1 n=1 Tax=Ecto... [more]
A0A8E6Y896_MONPR7.230e-2747.45Pathogenesis-related protein 1 n=1 Tax=Moniliophth... [more]
A0A0W0G968_9AGAR5.060e-2545.26Pathogenesis-related protein 1 n=10 Tax=Moniliopht... [more]
A0A6H5KE93_9PHAE7.250e-2545.71SCP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LQY8_ECTSI1.910e-2344.29SCP-domain containing protein n=1 Tax=Ectocarpus s... [more]
A0A7H4K672_9HYPH9.360e-2242.34SCP-like extracellular n=1 Tax=Oricola sp. TaxID=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001283Cysteine-rich secretory protein-relatedPRINTSPR00837V5TPXLIKEcoord: 320..338
score: 33.3
coord: 414..427
score: 53.31
coord: 388..404
score: 48.61
IPR001283Cysteine-rich secretory protein-relatedPANTHERPTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDcoord: 287..429
IPR002889Carbohydrate-binding WSCSMARTSM00321SLG_2coord: 94..189
e-value: 3.1E-9
score: 46.7
IPR002889Carbohydrate-binding WSCPFAMPF01822WSCcoord: 98..179
e-value: 4.8E-9
score: 36.3
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 94..189
score: 9.749
IPR014044CAP domainSMARTSM00198SCP_3coord: 299..427
e-value: 1.1E-24
score: 98.0
IPR014044CAP domainPFAMPF00188CAPcoord: 305..419
e-value: 7.1E-16
score: 59.2
IPR035940CAP superfamilyGENE3D3.40.33.10coord: 299..436
e-value: 1.6E-32
score: 114.8
IPR035940CAP superfamilySUPERFAMILY55797PR-1-likecoord: 299..432
NoneNo IPR availablePANTHERPTHR10334:SF398coord: 287..429
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..443
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.797
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01010CRISP_2coord: 414..425

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6565contigH-elongata_contig6565:1969..7104 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6565.14147.1mRNA_H-elongata_contig6565.14147.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6565 971..8344 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6565.14147.1 ID=prot_H-elongata_contig6565.14147.1|Name=mRNA_H-elongata_contig6565.14147.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=444bp
MMPKAASAVLLATTVVPTVLALNLRTGGPEELQQAVRRVEQRHTDRQLWG
RESGSGTSTRATGNDDRTDGGRGDGARNSTRTADDDDDIVADEAYTHIGC
FQIDEEIVAGYGASNFSYSSEMSTSQCYKKCSRRGATFMALANGFICWCG
CGEEDEYSQGGVGMCDTPCWGDEDMMCGGEEAFDLYHIEEGEMAHSSMAS
TSSPMPPPMENKTNEMGTSTFSHMSTGDEFEPLPTRGPVSMMSSQEIPTP
PSIETQTVTTSTTSTSTTPTPMVTPRTRAPATSVTSTSSKSSTSGSAPAD
MEMLLEMHNLARCEHNADPLTWSDTVAASAAEYAQVLADACGSLVHSDSI
YGENLYMCYGSTSCYSPERAMEGLYEEEINSSSIDGYGGHATQILWKSTT
ELGCALAYCGDRTYLVCQYNPPGNYIGMYDENVEVAAGNGCYS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001283CRISP-related
IPR002889WSC_carb-bd
IPR014044CAP_domain
IPR035940CAP_sf
IPR018244Allrgn_V5/Tpx1_CS