prot_H-elongata_contig65576.14139.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig65576.14139.1
Unique Name	prot_H-elongata_contig65576.14139.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	156

Homology

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BLAST of mRNA_H-elongata_contig65576.14139.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE)

HSP 1 Score: 254 bits (648), Expect = 5.540e-77
Identity = 121/155 (78.06%), Postives = 136/155 (87.74%), Query Frame = 0

Query:    1 IDIWTDKGSGRKFLGLHVFYVTEKFERKDALLSVKRYSPAQGVLGDAKASEVLLEIMKSILHEFGLKPSNLASGTTDSGSDVNAVSVNGLWTFYGVLWTWCFCHLMVKAAEQAFGIHLDPAKSKNPEARELLRNVIKVVENLNKSSNLRAKFDDL 155
            IDIWTDKGSGRKFLGLHVFYV   FE KDALLS+KRY+P QG LGD +AS+VL +IMKS+L EFGLKPS+LASGTTDSGSDV AVS N LW  Y VLW WCFCHLMVKAAEQA+GIHLDPAKSKNP+AR++L+ V+KVVENLNKS N +AKF+DL
Sbjct:  261 IDIWTDKGSGRKFLGLHVFYVDANFELKDALLSIKRYAPDQGSLGDQRASDVLFQIMKSVLEEFGLKPSHLASGTTDSGSDVKAVSTNCLWPMYAVLWCWCFCHLMVKAAEQAYGIHLDPAKSKNPQARDILKKVVKVVENLNKSPNFKAKFEDL 415

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BLAST of mRNA_H-elongata_contig65576.14139.1 vs. uniprot
Match: A0A6H5KZ81_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ81_9PHAE)

HSP 1 Score: 233 bits (593), Expect = 1.260e-73
Identity = 118/157 (75.16%), Postives = 133/157 (84.71%), Query Frame = 0

Query:    1 IDIWTDKGSGRKFLGLHVFYVTEKFERKDALL--SVKRYSPAQGVLGDAKASEVLLEIMKSILHEFGLKPSNLASGTTDSGSDVNAVSVNGLWTFYGVLWTWCFCHLMVKAAEQAFGIHLDPAKSKNPEARELLRNVIKVVENLNKSSNLRAKFDDL 155
            IDIWT+KGSGRKFLG+H++YVT  FE K ALL   VKRYSP QG L +A+ASEVLLEI+KSIL E GL PS+LASGTTDSGSDV AVSVNGL   YGVLW WC CH+MVKAAEQAFG+H DP KSKNP AR++++ VIKVVENLNKSS LRAKF+DL
Sbjct:  115 IDIWTEKGSGRKFLGVHLYYVTASFEMKHALLCVGVKRYSPDQGALSEARASEVLLEIVKSILVEVGLSPSDLASGTTDSGSDVKAVSVNGLHPHYGVLWNWCACHMMVKAAEQAFGVHPDPTKSKNPGARDVIKVVIKVVENLNKSSYLRAKFEDL 271

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BLAST of mRNA_H-elongata_contig65576.14139.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 2.240e-68
Identity = 109/155 (70.32%), Postives = 128/155 (82.58%), Query Frame = 0

Query:    1 IDIWTDKGSGRKFLGLHVFYVTEKFERKDALLSVKRYSPAQGVLGDAKASEVLLEIMKSILHEFGLKPSNLASGTTDSGSDVNAVSVNGLWTFYGVLWTWCFCHLMVKAAEQAFGIHLDPAKSKNPEARELLRNVIKVVENLNKSSNLRAKFDDL 155
            IDIW DK SGRKFLG+HVFYVT  FE K  LLS+KRY P+Q  LG+AKA+EVLLEI+++ILHEFG +PS+LASGTTDSGSDV +VSVNGL   YGVLW WC+CHLM+KAAE AFG H DP KSKNPEA  +L+N+I +V  L+KS NL AKF+DL
Sbjct:   17 IDIWADKPSGRKFLGVHVFYVTANFELKQTLLSIKRYRPSQDALGEAKAAEVLLEILEAILHEFGRRPSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCHLMIKAAEDAFGTHPDPQKSKNPEAHNMLKNLIGIVGTLHKSLNLTAKFEDL 171

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BLAST of mRNA_H-elongata_contig65576.14139.1 vs. uniprot
Match: A0A6H5KS21_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS21_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 9.320e-60
Identity = 102/155 (65.81%), Postives = 120/155 (77.42%), Query Frame = 0

Query:    1 IDIWTDKGSGRKFLGLHVFYVTEKFERKDALLSVKRYSPAQGVLGDAKASEVLLEIMKSILHEFGLKPSNLASGTTDSGSDVNAVSVNGLWTFYGVLWTWCFCHLMVKAAEQAFGIHLDPAKSKNPEARELLRNVIKVVENLNKSSNLRAKFDDL 155
            IDIWTDK SGRKFLG+H+FYVT  FE K AL+S             AKA+EVLL+I++S+LHEFGL+ S+LASGTTDSGSDV +VSVNGL   YGVLW WC CHLMVKAAE AFG H DP KSKNPE R++L+NVI +V  L+KS NL AKF+D+
Sbjct:  187 IDIWTDKPSGRKFLGVHLFYVTANFELKQALIS-------------AKAAEVLLKILESVLHEFGLRASDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCCCHLMVKAAEDAFGTHPDPQKSKNPEGRKMLKNVIGMVGTLHKSPNLTAKFEDV 328

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BLAST of mRNA_H-elongata_contig65576.14139.1 vs. uniprot
Match: A0A6H5JZ66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ66_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 1.510e-58
Identity = 102/155 (65.81%), Postives = 120/155 (77.42%), Query Frame = 0

Query:    1 IDIWTDKGSGRKFLGLHVFYVTEKFERKDALLSVKRYSPAQGVLGDAKASEVLLEIMKSILHEFGLKPSNLASGTTDSGSDVNAVSVNGLWTFYGVLWTWCFCHLMVKAAEQAFGIHLDPAKSKNPEARELLRNVIKVVENLNKSSNLRAKFDDL 155
            IDIW DK SGRKFLG+HVFYVT  FE K  LLS          LG+ KA+EVLLEI+++IL+EFGL+PS+LASGTTDSGSDV +VSVNGL   YGVLW WC+CHLMVKAAE AFG   DP  SKNPEAR +L+N+I ++  L+KS NL AKF+DL
Sbjct:   17 IDIWADKPSGRKFLGVHVFYVTANFELKQTLLS--------DALGEVKAAEVLLEILEAILNEFGLRPSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCHLMVKAAEDAFGTRPDPQMSKNPEARNMLKNLIGIIGTLHKS-NLTAKFEDL 162

[Close]

BLAST of mRNA_H-elongata_contig65576.14139.1 vs. uniprot
Match: A0A6H5KEE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE6_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 3.880e-54
Identity = 89/122 (72.95%), Postives = 104/122 (85.25%), Query Frame = 0

Query:   34 VKRYSPAQGVLGDAKASEVLLEIMKSILHEFGLKPSNLASGTTDSGSDVNAVSVNGLWTFYGVLWTWCFCHLMVKAAEQAFGIHLDPAKSKNPEARELLRNVIKVVENLNKSSNLRAKFDDL 155
            +KRYSP+Q  LG+A ASEVLLEI KSIL EFGL+PS+LASGTTDSGSDV + SVNGL+  YGVLW WCFCHLMVKAAE  FG H+DP KSKNPEAR++L+NVI +V  LN+SSN +AKF+DL
Sbjct:   10 IKRYSPSQDALGEAAASEVLLEIFKSILREFGLRPSDLASGTTDSGSDVKSASVNGLYPQYGVLWNWCFCHLMVKAAEDGFGTHVDPQKSKNPEARDMLKNVISMVGTLNRSSNFKAKFEDL 131

[Close]

BLAST of mRNA_H-elongata_contig65576.14139.1 vs. uniprot
Match: A0A6H5K8W6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W6_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 1.970e-52
Identity = 95/125 (76.00%), Postives = 100/125 (80.00%), Query Frame = 0

Query:   31 LLSVKRYSPAQGVLGDAKASEVLLEIMKSILHEFGLKPSNLASGTTDSGSDVNAVSVNGLWTFYGVLWTWCFCHLMVKAAEQAFGIHLDPAKSKNPEARELLRNVIKVVENLNKSSNLRAKFDDL 155
            L   KRYSP QG LG AKASEVLL I KSILHEFGL PS LASGTTDSGSDV AVS+NGLW  +GVLW WCFCHLM KAAEQ F   LD  KSKNP AR+LL+ VIKVVE LNKSSNL AKF+DL
Sbjct:    2 LFKSKRYSPDQGALGQAKASEVLLVIFKSILHEFGLNPSYLASGTTDSGSDVKAVSINGLWKHFGVLWNWCFCHLM-KAAEQPFCTSLDTVKSKNPAARDLLKTVIKVVETLNKSSNLGAKFEDL 125

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BLAST of mRNA_H-elongata_contig65576.14139.1 vs. uniprot
Match: A0A6H5JWR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWR2_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 1.010e-51
Identity = 91/155 (58.71%), Postives = 108/155 (69.68%), Query Frame = 0

Query:    1 IDIWTDKGSGRKFLGLHVFYVTEKFERKDALLSVKRYSPAQGVLGDAKASEVLLEIMKSILHEFGLKPSNLASGTTDSGSDVNAVSVNGLWTFYGVLWTWCFCHLMVKAAEQAFGIHLDPAKSKNPEARELLRNVIKVVENLNKSSNLRAKFDDL 155
            IDIWT+K  G                             AQG LG+AKA+EVL EI K+ILHEFGL+PS++ASGTTDSGSDV +VS+NGL   YGVLW WCFCHLMVK AE  FG H+DP KSKNPEAR++L+NVI +V NL++SSNL+A FDDL
Sbjct:  103 IDIWTEKSIG-----------------------------AQGALGEAKAAEVLFEIFKAILHEFGLRPSDIASGTTDSGSDVKSVSINGLHPHYGVLWNWCFCHLMVKTAEDGFGTHVDPQKSKNPEARDMLKNVISIVGNLHRSSNLKANFDDL 228

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BLAST of mRNA_H-elongata_contig65576.14139.1 vs. uniprot
Match: A0A6H5K0V1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0V1_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 1.260e-49
Identity = 84/116 (72.41%), Postives = 98/116 (84.48%), Query Frame = 0

Query:   40 AQGVLGDAKASEVLLEIMKSILHEFGLKPSNLASGTTDSGSDVNAVSVNGLWTFYGVLWTWCFCHLMVKAAEQAFGIHLDPAKSKNPEARELLRNVIKVVENLNKSSNLRAKFDDL 155
            AQ  L +A ASEVLLEI+KSIL EFGL+PS+LASGTTDS SDV +VSVNGL+  YGVLW WCFCHLMVKAAE  FG H+DP KSKNPEAR++L+NVI +V  LN+SSN +AKF+DL
Sbjct:   87 AQDALREAAASEVLLEIVKSILREFGLRPSDLASGTTDSKSDVKSVSVNGLYPQYGVLWNWCFCHLMVKAAEDGFGTHVDPQKSKNPEARDMLKNVISMVGTLNRSSNFKAKFEDL 202

[Close]

BLAST of mRNA_H-elongata_contig65576.14139.1 vs. uniprot
Match: A0A6H5JWE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWE7_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 1.350e-49
Identity = 82/126 (65.08%), Postives = 100/126 (79.37%), Query Frame = 0

Query:   30 ALLSVKRYSPAQGVLGDAKASEVLLEIMKSILHEFGLKPSNLASGTTDSGSDVNAVSVNGLWTFYGVLWTWCFCHLMVKAAEQAFGIHLDPAKSKNPEARELLRNVIKVVENLNKSSNLRAKFDDL 155
            A   +KRY P+Q  LG+AKASEVLLEI+K+ILHEFGL PS+LA GTTDSGSDV +VSVNGL   +GVLW WCFCHLMVK AE  F  H+DP KSKNPEAR++L+ +I +V  L++S+N + K DDL
Sbjct:   14 AFAQIKRYEPSQDALGEAKASEVLLEIVKAILHEFGLYPSDLAPGTTDSGSDVKSVSVNGLHPQFGVLWNWCFCHLMVKVAEDGFVTHVDPQKSKNPEARDMLKKLINLVGTLHRSANFKVKIDDL 139

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig65576.14139.1 vs. uniprot

BLAST of mRNA_H-elongata_contig65576.14139.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JJJ9_9PHAE	5.540e-77	78.06	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KZ81_9PHAE	1.260e-73	75.16	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5JB08_9PHAE	2.240e-68	70.32	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KS21_9PHAE	9.320e-60	65.81	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5JZ66_9PHAE	1.510e-58	65.81	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KEE6_9PHAE	3.880e-54	72.95	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K8W6_9PHAE	1.970e-52	76.00	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JWR2_9PHAE	1.010e-51	58.71	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K0V1_9PHAE	1.260e-49	72.41	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JWE7_9PHAE	1.350e-49	65.08	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 1..150

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig65576	contig	H-elongata_contig65576:2336..3170 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig65576.14139.1	mRNA_H-elongata_contig65576.14139.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig65576 2336..3170 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig65576.14139.1 ID=prot_H-elongata_contig65576.14139.1|Name=mRNA_H-elongata_contig65576.14139.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=156bp
IDIWTDKGSGRKFLGLHVFYVTEKFERKDALLSVKRYSPAQGVLGDAKAS
EVLLEIMKSILHEFGLKPSNLASGTTDSGSDVNAVSVNGLWTFYGVLWTW
CFCHLMVKAAEQAFGIHLDPAKSKNPEARELLRNVIKVVENLNKSSNLRA
KFDDL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012337	RNaseH-like_sf