prot_H-elongata_contig65524.14134.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig65524.14134.1
Unique Nameprot_H-elongata_contig65524.14134.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length87
Homology
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BLAST of mRNA_H-elongata_contig65524.14134.1 vs. uniprot
Match: A0A6H5JZ68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ68_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 1.690e-25
Identity = 56/87 (64.37%), Postives = 71/87 (81.61%), Query Frame = 0 
Query:    1 VSQLRQEVSLLRRDVDHIRSSMQQMHQEVGSAVLLLSRFIGLRWDTSEAVRLADERAASTSEAVNRLSKNVDVLEQRLAVSEESKPG 87
            V QLRQEV+ LRRDVD IRS+MQ MH+EVGSAVLLLSRF+GL+W+T E V L +++ A  SEAV+RL+ NV  L+QRL ++EE+K G
Sbjct:   12 VDQLRQEVATLRRDVDTIRSTMQDMHREVGSAVLLLSRFVGLQWNTDEVVGLVEDKTALASEAVDRLADNVGTLQQRLTIAEETKLG 98
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65524.14134.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JZ68_9PHAE1.690e-2564.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 57..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig65524contigH-elongata_contig65524:289..808 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig65524.14134.1mRNA_H-elongata_contig65524.14134.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig65524 289..808 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig65524.14134.1 ID=prot_H-elongata_contig65524.14134.1|Name=mRNA_H-elongata_contig65524.14134.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bp
VSQLRQEVSLLRRDVDHIRSSMQQMHQEVGSAVLLLSRFIGLRWDTSEAV
RLADERAASTSEAVNRLSKNVDVLEQRLAVSEESKPG
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