prot_H-elongata_contig65492.14131.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig65492.14131.1
Unique Nameprot_H-elongata_contig65492.14131.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length68
Homology
BLAST of mRNA_H-elongata_contig65492.14131.1 vs. uniprot
Match: D8LMY1_ECTSI (Protein-synthesizing GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMY1_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 5.950e-35
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0
Query:    1 MVNIGSTASGGKVLAVKQDLAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGNKIEIQ 64
            MVNIGSTASGGKVLAVKQDLAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGNKIEIQ
Sbjct:  381 MVNIGSTASGGKVLAVKQDLAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGNKIEIQ 444          
BLAST of mRNA_H-elongata_contig65492.14131.1 vs. uniprot
Match: A0A7S0F643_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7S0F643_9STRA)

HSP 1 Score: 118 bits (296), Expect = 4.180e-32
Identity = 53/66 (80.30%), Postives = 63/66 (95.45%), Query Frame = 0
Query:    1 MVNIGSTASGGKVLAVKQDLAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGNKIEIQGS 66
            MVNIGSTA+GG+V+AVK DLAK++LTQPVCT+EGEKIALSRRVDKHWRLIGWGQIR+G+KIE++  
Sbjct:  131 MVNIGSTATGGRVIAVKGDLAKVVLTQPVCTEEGEKIALSRRVDKHWRLIGWGQIRKGSKIEVKAE 196          
BLAST of mRNA_H-elongata_contig65492.14131.1 vs. uniprot
Match: A0A6S9GDD6_HETAK (Protein-synthesizing GTPase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GDD6_HETAK)

HSP 1 Score: 124 bits (311), Expect = 4.570e-32
Identity = 58/63 (92.06%), Postives = 63/63 (100.00%), Query Frame = 0
Query:    1 MVNIGSTASGGKVLAVKQDLAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGNKIEI 63
            MVNIGSTA+GGKVLAVK+DLAK+LLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRG+K+EI
Sbjct:  411 MVNIGSTATGGKVLAVKEDLAKVLLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGSKLEI 473          
BLAST of mRNA_H-elongata_contig65492.14131.1 vs. uniprot
Match: K3WE95_GLOUD (Protein-synthesizing GTPase n=29 Tax=Oomycota TaxID=4762 RepID=K3WE95_GLOUD)

HSP 1 Score: 123 bits (308), Expect = 1.070e-31
Identity = 58/67 (86.57%), Postives = 64/67 (95.52%), Query Frame = 0
Query:    1 MVNIGSTASGGKVLAVKQDLAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGNKIEIQGSK 67
            MVNIGSTA+GGKVLAVKQDLAKILLT PVCTQEGEKIA+SRR+DKHWRLIGWGQIRRG++IEI  S+
Sbjct:  397 MVNIGSTATGGKVLAVKQDLAKILLTAPVCTQEGEKIAISRRIDKHWRLIGWGQIRRGSRIEIAESE 463          
BLAST of mRNA_H-elongata_contig65492.14131.1 vs. uniprot
Match: A0A835YYS7_9STRA (Protein-synthesizing GTPase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYS7_9STRA)

HSP 1 Score: 123 bits (309), Expect = 1.090e-31
Identity = 59/66 (89.39%), Postives = 62/66 (93.94%), Query Frame = 0
Query:    1 MVNIGSTASGGKVLAVKQDLAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGNKIEIQGS 66
            MVNIGSTASGGKVLAVK DLAKILLTQPVCT+EGEKIALSRRVDKHWRLIGWGQIRRG+KI + G 
Sbjct:  430 MVNIGSTASGGKVLAVKGDLAKILLTQPVCTEEGEKIALSRRVDKHWRLIGWGQIRRGSKIAVAGD 495          
BLAST of mRNA_H-elongata_contig65492.14131.1 vs. uniprot
Match: F0Y3F3_AURAN (Protein-synthesizing GTPase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3F3_AURAN)

HSP 1 Score: 120 bits (301), Expect = 1.160e-30
Identity = 57/66 (86.36%), Postives = 61/66 (92.42%), Query Frame = 0
Query:    1 MVNIGSTASGGKVLAVKQDLAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGNKIEIQGS 66
            MVNIGSTA+GGKVLAVK DLAKILLTQPVCT EGEKIALSRRVDKHWRLIGWGQIRRG +++I  S
Sbjct:  405 MVNIGSTATGGKVLAVKADLAKILLTQPVCTMEGEKIALSRRVDKHWRLIGWGQIRRGARVDINAS 470          
BLAST of mRNA_H-elongata_contig65492.14131.1 vs. uniprot
Match: A0A7S0CFG0_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CFG0_9STRA)

HSP 1 Score: 112 bits (279), Expect = 2.450e-30
Identity = 53/63 (84.13%), Postives = 58/63 (92.06%), Query Frame = 0
Query:    1 MVNIGSTASGGKVLAVKQDLAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGNKIEI 63
            MVNIGSTA+GG+V AVK +LAK+ LTQPVCTQEGEKIALSRRVDKHWRLIGWGQIR+G  IEI
Sbjct:   65 MVNIGSTATGGRVKAVKDELAKVALTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRKGVVIEI 127          
BLAST of mRNA_H-elongata_contig65492.14131.1 vs. uniprot
Match: A0A2D4C5H9_PYTIN (Protein-synthesizing GTPase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5H9_PYTIN)

HSP 1 Score: 120 bits (302), Expect = 2.690e-30
Identity = 56/64 (87.50%), Postives = 62/64 (96.88%), Query Frame = 0
Query:    1 MVNIGSTASGGKVLAVKQDLAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGNKIEIQ 64
            MVNIGSTA+GGKVLAVKQDLAKILLT PVCTQEGEKIA+SRR+DKHWRLIGWG+IRRG ++EIQ
Sbjct:  396 MVNIGSTATGGKVLAVKQDLAKILLTAPVCTQEGEKIAISRRIDKHWRLIGWGEIRRGIRVEIQ 459          
BLAST of mRNA_H-elongata_contig65492.14131.1 vs. uniprot
Match: A0A7S4A8Q2_9STRA (Protein-synthesizing GTPase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A8Q2_9STRA)

HSP 1 Score: 119 bits (298), Expect = 2.840e-30
Identity = 56/66 (84.85%), Postives = 61/66 (92.42%), Query Frame = 0
Query:    1 MVNIGSTASGGKVLAVKQDLAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGNKIEIQGS 66
            MVNIGSTA+GGKVLAVK DLAKILLTQPVCT EGEKIALSRRVDKHWRLIGWGQIRRG ++E+  +
Sbjct:  394 MVNIGSTATGGKVLAVKADLAKILLTQPVCTTEGEKIALSRRVDKHWRLIGWGQIRRGARVEVAAA 459          
BLAST of mRNA_H-elongata_contig65492.14131.1 vs. uniprot
Match: A0A6U4HRZ6_9STRA (Protein-synthesizing GTPase n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4HRZ6_9STRA)

HSP 1 Score: 118 bits (296), Expect = 7.730e-30
Identity = 56/66 (84.85%), Postives = 62/66 (93.94%), Query Frame = 0
Query:    1 MVNIGSTASGGKVLAVKQDLAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGNKIEIQGS 66
            MVNIGSTA+GG+V+AVK++ AKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRG +IE Q S
Sbjct:  423 MVNIGSTATGGRVVAVKKEKAKILLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGTRIEDQNS 488          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65492.14131.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMY1_ECTSI5.950e-35100.00Protein-synthesizing GTPase n=2 Tax=Ectocarpus Tax... [more]
A0A7S0F643_9STRA4.180e-3280.30Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A6S9GDD6_HETAK4.570e-3292.06Protein-synthesizing GTPase n=1 Tax=Heterosigma ak... [more]
K3WE95_GLOUD1.070e-3186.57Protein-synthesizing GTPase n=29 Tax=Oomycota TaxI... [more]
A0A835YYS7_9STRA1.090e-3189.39Protein-synthesizing GTPase n=2 Tax=Tribonema minu... [more]
F0Y3F3_AURAN1.160e-3086.36Protein-synthesizing GTPase n=1 Tax=Aureococcus an... [more]
A0A7S0CFG0_9STRA2.450e-3084.13Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A2D4C5H9_PYTIN2.690e-3087.50Protein-synthesizing GTPase n=1 Tax=Pythium insidi... [more]
A0A7S4A8Q2_9STRA2.840e-3084.85Protein-synthesizing GTPase n=1 Tax=Pelagomonas ca... [more]
A0A6U4HRZ6_9STRA7.730e-3084.85Protein-synthesizing GTPase n=4 Tax=Phaeomonas par... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.30.10coord: 1..64
e-value: 6.7E-26
score: 92.6
NoneNo IPR availablePANTHERPTHR42854:SF6EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3, X-LINKEDcoord: 1..61
NoneNo IPR availablePANTHERPTHR42854FAMILY NOT NAMEDcoord: 1..61
IPR015256Translation initiation factor 2, gamma subunit, C-terminalPFAMPF09173eIF2_Ccoord: 1..55
e-value: 6.5E-26
score: 90.4
IPR009001Translation elongation factor EF1A/initiation factor IF2gamma, C-terminalSUPERFAMILY50465EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domaincoord: 1..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig65492contigH-elongata_contig65492:2078..3241 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig65492.14131.1mRNA_H-elongata_contig65492.14131.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig65492 2078..3241 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig65492.14131.1 ID=prot_H-elongata_contig65492.14131.1|Name=mRNA_H-elongata_contig65492.14131.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=68bp
MVNIGSTASGGKVLAVKQDLAKILLTQPVCTQEGEKIALSRRVDKHWRLI
GWGQIRRGNKIEIQGSK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015256TIF2_gsu_C
IPR009001Transl_elong_EF1A/Init_IF2_C