prot_H-elongata_contig6519.14110.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6519.14110.1
Unique Nameprot_H-elongata_contig6519.14110.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length632
Homology
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BLAST of mRNA_H-elongata_contig6519.14110.1 vs. uniprot
Match: D7G0V5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0V5_ECTSI)

HSP 1 Score: 466 bits (1198), Expect = 3.080e-148
Identity = 309/656 (47.10%), Postives = 388/656 (59.15%), Query Frame = 0 
Query:    1 LARLVDSLLRGRSSPSARHEAAAAMSDVRSFVRKWRTARRETGTPTTESQKTGPPSPDILLKLAQKGVHLHNNVRKLPQSKEGGSGDWKSTTIAYLRATAASLVSLGSTSSPKDCANLCRLFSKAGDMLVEAAEDDIRASALEMFDDAQAFFSRLPSSFY-------GKLSLAAEDLVMAMHKASTRRTEVLSRTTGNVDEMVTGYEDQLNMLSKVAPPGLSVSTATHAASVGEERFRKGDCRGASRLFRVSLRALGADLGEETTVVS----AGHA-ILRRTILFSLAHCYSKSGDHVLAIQCINNLGNGGQHSAEG---DPDAVEFFFAKCKVLCDAGDFPGAHGAAEALVEASSPP-------VTETSGATKLDLAAARMVSYRDKFSDRSLGLFSMIATRWAGSPKEFDAYIALLDGIGLAARLRSERCSAAATSADRTGDVVEPLGGHQKATEVATMV----VAKAEEIAEQCFLPECNAWNIAGCQVEAALEAFITFVEFFQGRREWKACTKWCDRAILLAENLMNSPVLATAPSEESSAADPSMLAGLLTLRGEAECRLGDFRSSAQSLDRALEVYPTYSRAREVAFWSASCDPTCDENLLSSRLSTLSGPLSGLDSRARCEYLTSCVALVAETSTTRRRQNESGEATIG 630
            +ARLVDSLLRGR+  SARHEAA A+SD+R+FV  WR                    PD                   P SK     D + +T    R    S  S GS  S         +   + D L++ A+      ALEMF+DA+ +FSRLP SFY       G  SL+AEDL+MA+HKAS+RR EVLSRTTGNVD+MV GYE QL +L+  +P GL +STA HAASVGEERF+KGDCRGASR+ R++L+A+G D+G   T  +    A H   LRRTILFSLAHC SKSGDH  AI+ I +L  GG   A+G   DP   +F FAKCKVL DAGD  GA+ AA+ALV  +  P       V +      LDLAAAR++S RD  SDRSL LF+ IA+R+AG+PK  DA +ALL G+ +AARLRSE   A   S D         G H+K +  A       V +AE+ A+          N+A  QV++ALE  +TF EFFQGR +W++C +WC RAI LA            P  + ++    +LA LLTLRGE ECR GDF SS+Q+LD+AL + PTY RAREVAFWSA+ DP  DE+ LS+RLS LSGP + L   AR EYL +CV LVA      +  ++ GE+  G
Sbjct:    1 MARLVDSLLRGRAQASARHEAATAVSDIRAFVHAWR--------------------PDA------------------PASK-----DEQDSTEPEGRGRTRSHGSGGSDPS---------MNRPSADTLLKLAQ------ALEMFEDAEGYFSRLPGSFYATGWQKFGMPSLSAEDLIMAVHKASSRRIEVLSRTTGNVDQMVEGYEWQLKILTARSPAGLRMSTAVHAASVGEERFKKGDCRGASRILRLALQAIGGDVGSGPTATASDPQAAHTGKLRRTILFSLAHCCSKSGDHNNAIKFIKHLEEGGGWCAKGGGTDPPP-KFLFAKCKVLTDAGDLTGAYTAAKALVALTPAPSGKPTAGVGDGEPEDGLDLAAARLISSRDDCSDRSLDLFAAIASRFAGTPKAVDARVALLSGLAMAARLRSEGGGAGWWSPD---------GQHEKGSAAAATAENEAVGRAEKTADDMIAEISGCNNVATYQVDSALEVLVTFTEFFQGRDKWESCARWCGRAINLATGDSKGSTPKRVPHADKASL---LLASLLTLRGEMECRTGDFASSSQTLDQALALCPTYGRAREVAFWSAARDPNRDESSLSARLSALSGPRARLTPGARREYLATCVGLVAGVRKATQDPDQRGESDAG 585
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6519.14110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G0V5_ECTSI3.080e-14847.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 226..562

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6519contigH-elongata_contig6519:4185..10384 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6519.14110.1mRNA_H-elongata_contig6519.14110.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6519 4185..10384 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6519.14110.1 ID=prot_H-elongata_contig6519.14110.1|Name=mRNA_H-elongata_contig6519.14110.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=632bp
LARLVDSLLRGRSSPSARHEAAAAMSDVRSFVRKWRTARRETGTPTTESQ
KTGPPSPDILLKLAQKGVHLHNNVRKLPQSKEGGSGDWKSTTIAYLRATA
ASLVSLGSTSSPKDCANLCRLFSKAGDMLVEAAEDDIRASALEMFDDAQA
FFSRLPSSFYGKLSLAAEDLVMAMHKASTRRTEVLSRTTGNVDEMVTGYE
DQLNMLSKVAPPGLSVSTATHAASVGEERFRKGDCRGASRLFRVSLRALG
ADLGEETTVVSAGHAILRRTILFSLAHCYSKSGDHVLAIQCINNLGNGGQ
HSAEGDPDAVEFFFAKCKVLCDAGDFPGAHGAAEALVEASSPPVTETSGA
TKLDLAAARMVSYRDKFSDRSLGLFSMIATRWAGSPKEFDAYIALLDGIG
LAARLRSERCSAAATSADRTGDVVEPLGGHQKATEVATMVVAKAEEIAEQ
CFLPECNAWNIAGCQVEAALEAFITFVEFFQGRREWKACTKWCDRAILLA
ENLMNSPVLATAPSEESSAADPSMLAGLLTLRGEAECRLGDFRSSAQSLD
RALEVYPTYSRAREVAFWSASCDPTCDENLLSSRLSTLSGPLSGLDSRAR
CEYLTSCVALVAETSTTRRRQNESGEATIGGS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf