prot_H-elongata_contig65144.14105.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig65144.14105.1
Unique Nameprot_H-elongata_contig65144.14105.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length193
Homology
BLAST of mRNA_H-elongata_contig65144.14105.1 vs. uniprot
Match: D7G0I5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0I5_ECTSI)

HSP 1 Score: 218 bits (554), Expect = 1.770e-68
Identity = 125/194 (64.43%), Postives = 152/194 (78.35%), Query Frame = 0
Query:    1 PSTCVLTGHRQEEEEPDKSAVAHGTAPKMSTTKAAKAEAEKEARIAAEIESRLQLSETAEQRRMRDRNRVEEADNELTNDLFGGDGNR-KGAAGGIASLSLKNMQDHMKLAIELCEKMESSKPAHVTGFFKEMITKLSSNMTTDGMTDVVNHLVVFRDEKRQAEERIAAAKANVLNIQAKQRANKKKSAKQKKA 193
            P+   ++   +EE++ D  AVA G APKMS  KAA         IAAE+E+RLQL ETAEQRR+R+RNRVEEADN+LT DLFGG G R +GA GG++ L+LKNMQDH+KLAIEL E+M+SSKPAH+T F KE++TKLS  MT DG+TD+VNH  +FRDEKRQAEERIA+AKAN  N+ A QRANKKKS K+KKA
Sbjct:   18 PTAVPVSWEDEEEDQEDAGAVAPGLAPKMSAAKAAXXXXXXXXXIAAELETRLQLGETAEQRRLRERNRVEEADNDLTEDLFGGGGARGQGAGGGLSGLALKNMQDHVKLAIELAERMDSSKPAHMTAFLKELVTKLSPKMTADGLTDLVNHTTMFRDEKRQAEERIASAKANKTNVIANQRANKKKSIKKKKA 211          
BLAST of mRNA_H-elongata_contig65144.14105.1 vs. uniprot
Match: A0A836CNA4_9STRA (Eukaryotic translation initiation factor 3 subunit J n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNA4_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.200e-16
Identity = 52/130 (40.00%), Postives = 78/130 (60.00%), Query Frame = 0
Query:   44 RIAAEIESRLQLSETAEQRRMRDRNRVEEADNELTNDLFGGDGNRKGAAG----GIASLSLKNMQDHMKLAIELCEKME----SSKPAHVTGFFKEMITKLSSNMTTDGMTDVVNHLVVFRDEKRQAEER 165
            RIAA  E+  Q +ETAE+RR+R+R RVEE+D+ LT DLFGG G  + A      G+  + LK  QDH+KLA++L EK+     S    ++    KE+IT++   ++ +    +  HL  F+D K  AE++
Sbjct:   58 RIAAAHEAAQQEAETAEERRLRERRRVEESDHALTEDLFGGGGTAEAAEAPAQAGVEGIPLKTTQDHVKLALDLGEKLSKDGSSGSSGNILALLKELITRVEGKLSLEETNQLALHLNKFKDAKMVAEQK 187          
BLAST of mRNA_H-elongata_contig65144.14105.1 vs. uniprot
Match: A0A7S2C417_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C417_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.660e-14
Identity = 48/132 (36.36%), Postives = 81/132 (61.36%), Query Frame = 0
Query:   23 HGTAPKMSTTKAAKAEAEKEARIAAEIESRLQLSETAEQRRMRDRNRVEEADNELTNDLFGGDGNRKGAAG---GIASLSLKNMQDHMKLAIELCEKMES--SKPAHVTGFFKEMITKLSSNMTTDGMTDVV 149
            HG APK+S  K AK + +K A+   ++ES LQ  ET ++RR+R+R  +E AD+ELT+DLFGG    +       G+   SLK+++DH+ LA ++ E++E+  SK  ++    KE + K   ++T   + +++
Sbjct:   40 HGEAPKLSAEKQAKLKNQKNAKKRNDLESALQEEETDDERRLRERLEIENADHELTDDLFGGGAKSETVVKIVQGVEGYSLKSLKDHLTLAHDVIERVENNKSKQNYIHAMLKEFVKKFDDHLTPGDLGEII 171          
BLAST of mRNA_H-elongata_contig65144.14105.1 vs. uniprot
Match: A0A1Z5JPF2_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPF2_FISSO)

HSP 1 Score: 72.0 bits (175), Expect = 7.740e-12
Identity = 43/112 (38.39%), Postives = 68/112 (60.71%), Query Frame = 0
Query:   58 TAEQRRMRDRNRVEEADNELTNDLFGGDGNRKGAAGGIAS---LSLKNMQDHMKLAIELCEKMESSKPAH-VTGFFKEMITKLSSNMTTDGMTDVVNHLVVFRDEKRQAEER 165
            T ++RR  +R R+E ADNELT+DLFG D  +  A G  A+   + LK+++DH+K A ++ E M+     H  + FFKE +T     +  D +T+++  L V ++EK QA +R
Sbjct:   95 TPDERRQLERQRIEAADNELTDDLFGADNTKNKATGAAAAGDVVVLKDLKDHLKHARKVAEAMKKHGNVHFASAFFKECVTSSKDVLDDDAVTELIKTLNVIKNEKVQAAKR 206          
BLAST of mRNA_H-elongata_contig65144.14105.1 vs. uniprot
Match: B7G7B8_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7B8_PHATC)

HSP 1 Score: 65.5 bits (158), Expect = 2.010e-9
Identity = 45/119 (37.82%), Postives = 72/119 (60.50%), Query Frame = 0
Query:   60 EQRRMRDRNRVEEADNELTNDLFGGDGNR--KGAAGGIASLS-----LKNMQDHMKLAIELCEKMESSKPAHVTG-FFKEMITKLSSNMTTDGMTDVVNHLVVFRDEKRQAEERIAAAK 170
            E RRM+ R +VEEADN LT+DLFGG   +  KGA GG A+ +     +K+++DH+K A ++ E M+     H+   FFKE++ +    +  D +T+++    V ++EK QA +R+   K
Sbjct:   99 ELRRMKQR-QVEEADNALTDDLFGGVDAKAGKGATGGAAAAAGDKVIMKDVKDHLKHARKVAECMQGHGKIHLAAAFFKELLQQSKDVLDDDAITEIIKTCNVIKNEKVQAAKRVTKVK 216          
BLAST of mRNA_H-elongata_contig65144.14105.1 vs. uniprot
Match: A0A6V1PD14_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PD14_HETAK)

HSP 1 Score: 63.2 bits (152), Expect = 1.330e-8
Identity = 38/130 (29.23%), Postives = 71/130 (54.62%), Query Frame = 0
Query:   53 LQLSETAEQRRMRDRNRVEEADNELTNDLFGGDGNR--------------------KGAAGGIASLSLKNMQDHMKLAIELCEKMESSKPAHVTGFFKEMITKLSSNMTTDGMTDVVNHLVVFRDEKRQA 162
            +Q +ET E+RR+R+R  +EEAD+ELT +L  G G                      K    G+ +L++ +++D M  A +L +++  +   HV  FFKEM+   + ++TTD +++++    V +++K +A
Sbjct:   83 IQANETDEERRIRERREIEEADHELTEELLSGAGAXXXXXXXXXXXXXXXXXXPATKKQEAGLGALAMDSLEDFMTTAAKLAQRLNGAPNHHVLAFFKEMLRGSTESLTTDDVSELIALANVIKNDKVKA 212          
BLAST of mRNA_H-elongata_contig65144.14105.1 vs. uniprot
Match: A0A6T7HVD2_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7HVD2_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 4.010e-6
Identity = 44/142 (30.99%), Postives = 82/142 (57.75%), Query Frame = 0
Query:   43 ARIAAEIESRLQLSETAEQRRMRDRNRVEEADNELTNDLFGGDGNRKGAAGGIASLS----------LKNMQDHMKLAIELCEKMESSKPAHVTG-FFKEMITKLSSNMTTDGMTDVVNHLVVFRDEKRQAEERIAAAKANV 173
            AR A E+E+ ++ + T E+RR+  + R+E+AD+ LT+DLFGG  +R G  G + + S          LK+++DH+K A ++ + +++    H+   F KE+I + S  +    +T++++   V ++EK      +AA+K  V
Sbjct:   84 ARKAIELEADMEANMTIEERRLLAKQRIEDADHALTDDLFGGV-DRSGPVGVVDAGSKAMGAGDTVVLKDLKDHLKHARKVGQCLKAHGKIHLAAAFLKEVIQESSDALDDGAITEIISICNVIKNEK------VAASKKKV 218          
BLAST of mRNA_H-elongata_contig65144.14105.1 vs. uniprot
Match: A0A6U5PFI3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A6U5PFI3_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 3.440e-5
Identity = 38/128 (29.69%), Postives = 73/128 (57.03%), Query Frame = 0
Query:   43 ARIAAEIESRLQLSETAEQRRMRDRNRVEEADNELTNDLFGGDGNRKGAAGGIA----SLSLKNMQDHMKLAIELCEKMESSKPAHV-TGFFKEMITKLSSNMTTDGMTDVVNHLVVFRDEKRQAEER 165
            AR A E+E+ ++ + T ++ +   R ++E+ADN LT+DLFG   NR  A G       ++ +K+++DH+K A ++ + + + K  H+ T F KE I +    +    +++++    V ++EK Q  +R
Sbjct:   85 ARKAMELEAEMEANMTPDELKKLKRKQIEDADNALTDDLFGTVDNRSKATGTSQGAGDTVVMKDLKDHLKHAKKVGQCIRTHKNVHLATAFLKEAIQECKDVLDDAAISELIKTCNVIKNEKVQNSKR 212          
BLAST of mRNA_H-elongata_contig65144.14105.1 vs. uniprot
Match: A0A7R9WM26_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WM26_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 6.170e-5
Identity = 35/105 (33.33%), Postives = 60/105 (57.14%), Query Frame = 0
Query:   66 DRNRVEEADNELTNDLFGGDGNRKGAA----GGIASLSLKNMQDHMKLAIELCEKMES-SKPAHVTGFFKEMITKLSSNMTTDGMTDVVNHLVVFRDEKRQAEER 165
            +R RVE+ADN L ++LFGG G +KGAA    G    L+L  ++DH+K A  +   ++   K    T F +E+I      +  + +++++    V ++EK QA++R
Sbjct:  100 ERKRVEDADNALADELFGGAGAKKGAAATTKGAGDQLALMTLKDHLKHAKVVSAALKKHGKTLLATTFLREVIQGSKDTLDVNAISELITACNVIKNEKIQADKR 204          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65144.14105.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7G0I5_ECTSI1.770e-6864.43Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CNA4_9STRA1.200e-1640.00Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2C417_9STRA1.660e-1436.36Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1Z5JPF2_FISSO7.740e-1238.39Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
B7G7B8_PHATC2.010e-937.82Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A6V1PD14_HETAK1.330e-829.23Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6T7HVD2_9STRA4.010e-630.99Hypothetical protein n=2 Tax=Attheya septentrional... [more]
A0A6U5PFI3_9STRA3.440e-529.69Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7R9WM26_9STRA6.170e-533.33Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 152..179
NoneNo IPR availableCOILSCoilCoilcoord: 56..76
IPR013906Eukaryotic translation initiation factor 3 subunit JPFAMPF08597eIF3_subunitcoord: 12..192
e-value: 1.9E-20
score: 73.9
IPR013906Eukaryotic translation initiation factor 3 subunit JPANTHERPTHR21681EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Jcoord: 12..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig65144contigH-elongata_contig65144:1223..3308 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig65144.14105.1mRNA_H-elongata_contig65144.14105.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig65144 1223..3308 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig65144.14105.1 ID=prot_H-elongata_contig65144.14105.1|Name=mRNA_H-elongata_contig65144.14105.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=193bp
PSTCVLTGHRQEEEEPDKSAVAHGTAPKMSTTKAAKAEAEKEARIAAEIE
SRLQLSETAEQRRMRDRNRVEEADNELTNDLFGGDGNRKGAAGGIASLSL
KNMQDHMKLAIELCEKMESSKPAHVTGFFKEMITKLSSNMTTDGMTDVVN
HLVVFRDEKRQAEERIAAAKANVLNIQAKQRANKKKSAKQKKA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013906eIF3j