prot_H-elongata_contig65106.14100.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig65106.14100.1
Unique Nameprot_H-elongata_contig65106.14100.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length125
Homology
[Close]
BLAST of mRNA_H-elongata_contig65106.14100.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 215 bits (548), Expect = 2.130e-70
Identity = 114/124 (91.94%), Postives = 119/124 (95.97%), Query Frame = 0 
Query:    1 MSGKGKGGRGDSKKSTSRSSKAGLQFPVGRIGRFLKNGKYAQRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVKK 124
            MSGKGKGGRG  KKST+RS+KAGLQFPVGR+GRFLK GKYA R+GAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK VKK
Sbjct:    1 MSGKGKGGRG--KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK 122
[Close]
BLAST of mRNA_H-elongata_contig65106.14100.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 213 bits (543), Expect = 7.270e-69
Identity = 113/123 (91.87%), Postives = 118/123 (95.93%), Query Frame = 0 
Query:    1 MSGKGKGGRGDSKKSTSRSSKAGLQFPVGRIGRFLKNGKYAQRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVK 123
            MSGKGKGGRG  KKST+RS+KAGLQFPVGR+GRFLK GKYA R+GAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK VK
Sbjct:   46 MSGKGKGGRG--KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 166
[Close]
BLAST of mRNA_H-elongata_contig65106.14100.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 208 bits (529), Expect = 2.570e-67
Identity = 111/120 (92.50%), Postives = 115/120 (95.83%), Query Frame = 0 
Query:    1 MSGKGKGGRGDSKKSTSRSSKAGLQFPVGRIGRFLKNGKYAQRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 120
            MSGKGKGGRG  KKSTS+SSKAGLQFPV RIGR+LK GKYA R+GAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRG--KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 118
[Close]
BLAST of mRNA_H-elongata_contig65106.14100.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 208 bits (529), Expect = 1.320e-66
Identity = 111/120 (92.50%), Postives = 115/120 (95.83%), Query Frame = 0 
Query:    1 MSGKGKGGRGDSKKSTSRSSKAGLQFPVGRIGRFLKNGKYAQRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 120
            MSGKGKGGRG  KKSTS+SSKAGLQFPV RIGR+LK GKYA R+GAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:   52 MSGKGKGGRG--KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 169
[Close]
BLAST of mRNA_H-elongata_contig65106.14100.1 vs. uniprot
Match: D8LLP0_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP0_ECTSI)

HSP 1 Score: 202 bits (513), Expect = 4.200e-65
Identity = 106/120 (88.33%), Postives = 113/120 (94.17%), Query Frame = 0 
Query:    1 MSGKGKGGRGDSKKSTSRSSKAGLQFPVGRIGRFLKNGKYAQRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 120
            MSGKGKGGRG  KK TSRS+KAGLQFPVGRIGRF+K GKY+ R+G GAPVY+AAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELN+LLG+ TIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRG--KKITSRSAKAGLQFPVGRIGRFIKQGKYSSRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNRLLGDATIASGGVLPNIHAVLLPKK 118
[Close]
BLAST of mRNA_H-elongata_contig65106.14100.1 vs. uniprot
Match: A0A836CG77_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG77_9STRA)

HSP 1 Score: 202 bits (513), Expect = 5.810e-65
Identity = 106/121 (87.60%), Postives = 116/121 (95.87%), Query Frame = 0 
Query:    1 MSGKGKGGRG-DSKKSTSRSSKAGLQFPVGRIGRFLKNGKYAQRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 120
            M+GKGKGGRG ++KKSTS+SSKAGLQFPV R+GRFLK G+YA+R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHIQLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPKK
Sbjct:    1 MAGKGKGGRGAEAKKSTSKSSKAGLQFPVARLGRFLKVGRYAERVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHAVLLPKK 121
[Close]
BLAST of mRNA_H-elongata_contig65106.14100.1 vs. uniprot
Match: B7FZS7_PHATC (Histone H2A n=2 Tax=Naviculales TaxID=38748 RepID=B7FZS7_PHATC)

HSP 1 Score: 200 bits (509), Expect = 3.170e-64
Identity = 102/121 (84.30%), Postives = 113/121 (93.39%), Query Frame = 0 
Query:    3 GKGKGGRGDSKKSTSRSSKAGLQFPVGRIGRFLKNGKYAQRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVK 123
            GKGKGGRGD K++TS SSKAGLQFPVGRIGR+L+ GKYA R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHI LAV+NDEELNKLLG VTIA+GGVLPNIHA+LLPKK +K
Sbjct:   10 GKGKGGRGDKKQTTSSSSKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGNVTIAAGGVLPNIHAILLPKKTIK 130
[Close]
BLAST of mRNA_H-elongata_contig65106.14100.1 vs. uniprot
Match: A0A835ZLE9_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE9_9STRA)

HSP 1 Score: 197 bits (501), Expect = 5.600e-63
Identity = 101/122 (82.79%), Postives = 115/122 (94.26%), Query Frame = 0 
Query:    3 GKGKGGRGDSKKSTSRSSKAGLQFPVGRIGRFLKNGKYAQRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVKK 124
            GKGKGGRGD KK+ S+S+KAGLQFPVGR+GRFLK G+YA+R+GAGAPVY+AAV+EYL AEVLEL+GNAARDNKK+RI+PRHIQLAVRNDEELNKLLG+VTIA+GGVLPNIHAVLLPKK   K
Sbjct:    5 GKGKGGRGD-KKAVSKSAKAGLQFPVGRVGRFLKQGRYAKRVGAGAPVYMAAVMEYLCAEVLELSGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGKVTIAAGGVLPNIHAVLLPKKTRSK 125
[Close]
BLAST of mRNA_H-elongata_contig65106.14100.1 vs. uniprot
Match: A0A835ZBB6_9STRA (Histone H2A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBB6_9STRA)

HSP 1 Score: 196 bits (499), Expect = 8.710e-63
Identity = 103/125 (82.40%), Postives = 114/125 (91.20%), Query Frame = 0 
Query:    1 MSGKGKGGRG-DSKKSTSRSSKAGLQFPVGRIGRFLKNGKYAQRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVVKK 124
            M+GKGKGGRG + KK TS+S+KAGLQFPV R+GR+LK G+YA R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHIQLAVRNDEELN+LLG VTIASGGVLPNIHAVLLPKK   K
Sbjct:    1 MAGKGKGGRGAEGKKITSQSAKAGLQFPVARMGRYLKQGRYADRVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNRLLGNVTIASGGVLPNIHAVLLPKKTAAK 125
[Close]
BLAST of mRNA_H-elongata_contig65106.14100.1 vs. uniprot
Match: A0A448ZH28_9STRA (Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 RepID=A0A448ZH28_9STRA)

HSP 1 Score: 196 bits (498), Expect = 8.950e-63
Identity = 103/120 (85.83%), Postives = 113/120 (94.17%), Query Frame = 0 
Query:    1 MSGKGKGGRGDSKKSTSRSSKAGLQFPVGRIGRFLKNGKYAQRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 120
            MSGKGKGGRG+ KKST+ S+KAGLQFPVGRIGR+L+ GKYA R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHI LAV+NDEELNKLLG VTIASGGVLPNIHA+LLPKK
Sbjct:    1 MSGKGKGGRGE-KKSTTASAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAILLPKK 119
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig65106.14100.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWI9_ECTSI2.130e-7091.94Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
D7G193_ECTSI7.270e-6991.87Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5KG79_9PHAE2.570e-6792.50Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FVQ5_ECTSI1.320e-6692.50Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D8LLP0_ECTSI4.200e-6588.33Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A836CG77_9STRA5.810e-6587.60Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
B7FZS7_PHATC3.170e-6484.30Histone H2A n=2 Tax=Naviculales TaxID=38748 RepID=... [more]
A0A835ZLE9_9STRA5.600e-6382.79Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A835ZBB6_9STRA8.710e-6382.40Histone H2A n=1 Tax=Tribonema minus TaxID=303371 R... [more]
A0A448ZH28_9STRA8.950e-6385.83Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 Re... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 58..71
score: 90.54
coord: 14..36
score: 71.55
coord: 43..58
score: 87.5
coord: 100..118
score: 76.04
coord: 72..86
score: 74.98
IPR002119Histone H2ASMARTSM00414h2a4coord: 3..123
e-value: 1.9E-80
score: 283.2
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 11..89
e-value: 1.7E-16
score: 60.7
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 92..124
e-value: 1.7E-18
score: 66.1
IPR009072Histone-foldGENE3D1.10.20.10coord: 1..124
e-value: 4.0E-63
score: 213.1
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 5..123
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 1..122
NoneNo IPR availablePANTHERPTHR23430:SF233HISTONE H2A.6-RELATEDcoord: 1..122
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 22..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig65106contigH-elongata_contig65106:466..840 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig65106.14100.1mRNA_H-elongata_contig65106.14100.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig65106 466..2060 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig65106.14100.1 ID=prot_H-elongata_contig65106.14100.1|Name=mRNA_H-elongata_contig65106.14100.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=125bp
MSGKGKGGRGDSKKSTSRSSKAGLQFPVGRIGRFLKNGKYAQRIGAGAPV
YLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGE
VTIASGGVLPNIHAVLLPKKVVKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR007125Histone_H2A/H2B/H3
IPR032454Histone_H2A_C
IPR009072Histone-fold
IPR032458Histone_H2A_CS