prot_H-elongata_contig6499.14088.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig6499.14088.1
Unique Name	prot_H-elongata_contig6499.14088.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	101

Homology

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BLAST of mRNA_H-elongata_contig6499.14088.1 vs. uniprot
Match: I1CG80_RHIO9 (Uncharacterized protein n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1CG80_RHIO9)

HSP 1 Score: 77.4 bits (189), Expect = 1.860e-14
Identity = 39/97 (40.21%), Postives = 58/97 (59.79%), Query Frame = 0

Query:    4 PITSRSYRYNPVIAHQVEAVIARYLVVGLMRRPQSPHASPVVVALKLSGKILSTSDFIRLKDDTIMPQIPIPRTDELLDTLGSASFFSSFDMMSEFH 100
            PI+ R YR +P+ A  +E  I +Y  +G++    SP A+PV++  K +G+     D+ +L   T     P+PR D+LLDTLG AS FS+ DM + FH
Sbjct:  277 PISHRPYRLSPIEAKYLEQEIDKYCKLGVISPSNSPWAAPVILVKKKNGEYRMVIDYRKLNAVTKKGSYPLPRIDDLLDTLGKASIFSALDMRAGFH 373

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BLAST of mRNA_H-elongata_contig6499.14088.1 vs. uniprot
Match: A0A6H5KKX5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKX5_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 4.860e-14
Identity = 39/97 (40.21%), Postives = 60/97 (61.86%), Query Frame = 0

Query:    4 PITSRSYRYNPVIAHQVEAVIARYLVVGLMRRPQSPHASPVVVALKLSGKILSTSDFIRLKDDTIMPQIPIPRTDELLDTLGSASFFSSFDMMSEFH 100
            P+ SR YR NP++  +V+AV+ +YL  GL++   SP ASP+VV  K  G +  T+++ RL     +   P+PR D++LD+L +   FS  D+ S FH
Sbjct:  321 PVASRPYRINPLMQKKVDAVLDQYLAPGLIQHFTSPLASPLVVIPKQDGYVRITANYKRLNALVDLDGQPLPRVDDILDSLYTGKVFSILDLNSAFH 417

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BLAST of mRNA_H-elongata_contig6499.14088.1 vs. uniprot
Match: I1C8J8_RHIO9 (Uncharacterized protein n=3 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1C8J8_RHIO9)

HSP 1 Score: 74.7 bits (182), Expect = 1.690e-13
Identity = 37/97 (38.14%), Postives = 56/97 (57.73%), Query Frame = 0

Query:    4 PITSRSYRYNPVIAHQVEAVIARYLVVGLMRRPQSPHASPVVVALKLSGKILSTSDFIRLKDDTIMPQIPIPRTDELLDTLGSASFFSSFDMMSEFH 100
            PI+ R YR +P+ A  ++  + +Y  +G++    SP A+PV++  K +G      D+ +L   T     P+PR D+LLDTLG A  FS+ DM S FH
Sbjct:  501 PISHRPYRISPLEAEHLQKELDKYCKLGVISPSNSPWAAPVILVKKKNGDYRMVIDYRKLNAKTKKDAYPLPRIDDLLDTLGKAKVFSALDMRSGFH 597

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BLAST of mRNA_H-elongata_contig6499.14088.1 vs. uniprot
Match: I1C7Q8_RHIO9 (Uncharacterized protein n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1C7Q8_RHIO9)

HSP 1 Score: 73.9 bits (180), Expect = 2.970e-13
Identity = 36/97 (37.11%), Postives = 57/97 (58.76%), Query Frame = 0

Query:    4 PITSRSYRYNPVIAHQVEAVIARYLVVGLMRRPQSPHASPVVVALKLSGKILSTSDFIRLKDDTIMPQIPIPRTDELLDTLGSASFFSSFDMMSEFH 100
            PI+ R YR +P+ A  ++  + +Y  +G++    SP A+PV++  K +G+     D+ +L   T     P+PR D+LLDTLG A  FS+ DM + FH
Sbjct:  154 PISHRPYRISPLEAEHLQKELEKYTKLGVISPSNSPWAAPVILVKKKNGEYRMVIDYRKLNAVTKKDAYPLPRIDDLLDTLGKAKVFSALDMRAGFH 250

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BLAST of mRNA_H-elongata_contig6499.14088.1 vs. uniprot
Match: I1CVT2_RHIO9 (Reverse transcriptase domain-containing protein n=2 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1CVT2_RHIO9)

HSP 1 Score: 73.9 bits (180), Expect = 3.160e-13
Identity = 36/97 (37.11%), Postives = 57/97 (58.76%), Query Frame = 0

Query:    4 PITSRSYRYNPVIAHQVEAVIARYLVVGLMRRPQSPHASPVVVALKLSGKILSTSDFIRLKDDTIMPQIPIPRTDELLDTLGSASFFSSFDMMSEFH 100
            PI+ R YR +P+ A  ++  + +Y  +G++    SP A+PV++  K +G+     D+ +L   T     P+PR D+LLDTLG A  FS+ DM + FH
Sbjct:  485 PISHRPYRISPLEAEHLQKELDKYCKLGVIEPSNSPWAAPVILVKKKNGEYRMVIDYRKLNAVTKKDAYPLPRIDDLLDTLGKAKVFSALDMRAGFH 581

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BLAST of mRNA_H-elongata_contig6499.14088.1 vs. uniprot
Match: I1CSI9_RHIO9 (Uncharacterized protein n=4 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1CSI9_RHIO9)

HSP 1 Score: 73.6 bits (179), Expect = 3.860e-13
Identity = 36/97 (37.11%), Postives = 56/97 (57.73%), Query Frame = 0

Query:    4 PITSRSYRYNPVIAHQVEAVIARYLVVGLMRRPQSPHASPVVVALKLSGKILSTSDFIRLKDDTIMPQIPIPRTDELLDTLGSASFFSSFDMMSEFH 100
            PI+ R YR +P+ A  ++  + +Y  +G++    SP A+PV++  K +G      D+ +L   T     P+PR D+LLDTLG A  FS+ DM + FH
Sbjct:   62 PISHRPYRISPIEAEYLQKELDKYCKLGVIAPSNSPWAAPVILVKKKNGDYRMVIDYRKLNAITKKDAYPLPRIDDLLDTLGKAKIFSALDMRAGFH 158

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BLAST of mRNA_H-elongata_contig6499.14088.1 vs. uniprot
Match: I1CVZ3_RHIO9 (Reverse transcriptase domain-containing protein n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1CVZ3_RHIO9)

HSP 1 Score: 73.6 bits (179), Expect = 4.140e-13
Identity = 36/97 (37.11%), Postives = 55/97 (56.70%), Query Frame = 0

Query:    4 PITSRSYRYNPVIAHQVEAVIARYLVVGLMRRPQSPHASPVVVALKLSGKILSTSDFIRLKDDTIMPQIPIPRTDELLDTLGSASFFSSFDMMSEFH 100
            PI  R YR +P+ A  ++  + +Y  +G++    SP A+PV++  K +G      D+ +L   T     P+PR D+LLDTLG A  FS+ DM + FH
Sbjct:  116 PIRHRPYRLSPIEADYLQKELDKYCKLGIISPSNSPWAAPVILVKKKNGDYRMVIDYRKLNTVTKKDSYPLPRIDDLLDTLGKAKIFSALDMRAGFH 212

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BLAST of mRNA_H-elongata_contig6499.14088.1 vs. uniprot
Match: I1BLD0_RHIO9 (RNA-directed DNA polymerase n=3 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1BLD0_RHIO9)

HSP 1 Score: 73.2 bits (178), Expect = 5.760e-13
Identity = 37/93 (39.78%), Postives = 55/93 (59.14%), Query Frame = 0

Query:    8 RSYRYNPVIAHQVEAVIARYLVVGLMRRPQSPHASPVVVALKLSGKILSTSDFIRLKDDTIMPQIPIPRTDELLDTLGSASFFSSFDMMSEFH 100
            R YR +P+ A  +E  I +Y  +G++    SP A+PV++  K +G+     D+ +L   T     P+PR D+LLDTLG AS FS+ DM + FH
Sbjct:  344 RPYRLSPIEAKYLEQEIDKYCKLGVISPSNSPWAAPVILVKKKNGEYRMVIDYRKLNAVTKKNSYPLPRIDDLLDTLGKASIFSALDMRAGFH 436

[Close]

BLAST of mRNA_H-elongata_contig6499.14088.1 vs. uniprot
Match: I1BWQ5_RHIO9 (Uncharacterized protein n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1BWQ5_RHIO9)

HSP 1 Score: 72.8 bits (177), Expect = 7.980e-13
Identity = 35/97 (36.08%), Postives = 56/97 (57.73%), Query Frame = 0

Query:    4 PITSRSYRYNPVIAHQVEAVIARYLVVGLMRRPQSPHASPVVVALKLSGKILSTSDFIRLKDDTIMPQIPIPRTDELLDTLGSASFFSSFDMMSEFH 100
            PI+ R YR +P+    ++  + +Y  +G++    SP A+PV++  K +G+     D+ +L   T     P+PR D+LLDTLG A  FS+ DM + FH
Sbjct:  430 PISHRPYRMSPIETEHLQKELDKYCKLGVIAPSNSPWAAPVILVKKKNGEYRMVIDYRKLNAVTKKDAYPLPRIDDLLDTLGKAKVFSALDMRAGFH 526

[Close]

BLAST of mRNA_H-elongata_contig6499.14088.1 vs. uniprot
Match: I1BUV0_RHIO9 (Uncharacterized protein n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1BUV0_RHIO9)

HSP 1 Score: 72.8 bits (177), Expect = 8.170e-13
Identity = 36/97 (37.11%), Postives = 56/97 (57.73%), Query Frame = 0

Query:    4 PITSRSYRYNPVIAHQVEAVIARYLVVGLMRRPQSPHASPVVVALKLSGKILSTSDFIRLKDDTIMPQIPIPRTDELLDTLGSASFFSSFDMMSEFH 100
            PI+   YR +PV +  ++  + +Y  +G++    SP A+PV++  K +G+     D+ +L   T     P+PR D+LLDTLG A  FS+ DM S FH
Sbjct:  926 PISHMPYRLSPVESEYLQKELNKYCKLGVISPSNSPWAAPVILVKKKNGEYRMVIDYRKLNAITKKDSYPLPRIDDLLDTLGKAKIFSALDMRSGFH 1022

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig6499.14088.1 vs. uniprot

BLAST of mRNA_H-elongata_contig6499.14088.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
I1CG80_RHIO9	1.860e-14	40.21	Uncharacterized protein n=1 Tax=Rhizopus delemar (...	[more]
A0A6H5KKX5_9PHAE	4.860e-14	40.21	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
I1C8J8_RHIO9	1.690e-13	38.14	Uncharacterized protein n=3 Tax=Rhizopus delemar (...	[more]
I1C7Q8_RHIO9	2.970e-13	37.11	Uncharacterized protein n=1 Tax=Rhizopus delemar (...	[more]
I1CVT2_RHIO9	3.160e-13	37.11	Reverse transcriptase domain-containing protein n=...	[more]
I1CSI9_RHIO9	3.860e-13	37.11	Uncharacterized protein n=4 Tax=Rhizopus delemar (...	[more]
I1CVZ3_RHIO9	4.140e-13	37.11	Reverse transcriptase domain-containing protein n=...	[more]
I1BLD0_RHIO9	5.760e-13	39.78	RNA-directed DNA polymerase n=3 Tax=Rhizopus delem...	[more]
I1BWQ5_RHIO9	7.980e-13	36.08	Uncharacterized protein n=1 Tax=Rhizopus delemar (...	[more]
I1BUV0_RHIO9	8.170e-13	37.11	Uncharacterized protein n=1 Tax=Rhizopus delemar (...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.70.270		coord: 72..99 e-value: 1.5E-15 score: 59.1
None	No IPR available	GENE3D	3.10.10.10		coord: 3..100 e-value: 1.5E-15 score: 59.1
None	No IPR available	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 3..100

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig6499	contig	H-elongata_contig6499:2007..2309 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig6499.14088.1	mRNA_H-elongata_contig6499.14088.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig6499 1690..2399 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig6499.14088.1 ID=prot_H-elongata_contig6499.14088.1|Name=mRNA_H-elongata_contig6499.14088.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=101bp
MNSPITSRSYRYNPVIAHQVEAVIARYLVVGLMRRPQSPHASPVVVALKL
SGKILSTSDFIRLKDDTIMPQIPIPRTDELLDTLGSASFFSSFDMMSEFH
*