prot_H-elongata_contig64985.14086.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig64985.14086.1
Unique Nameprot_H-elongata_contig64985.14086.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length217
Homology
BLAST of mRNA_H-elongata_contig64985.14086.1 vs. uniprot
Match: D8LI28_ECTSI (Peptidylprolyl isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI28_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 1.190e-60
Identity = 111/153 (72.55%), Postives = 127/153 (83.01%), Query Frame = 0
Query:   64 AEAATVDRTRLGTPILTESILLDLLPISGTGADVLRTIQNDIEKATILRTIYRRGTYSQTGGLVEQLTVPPSVWDRVQFVAERALEYLVERRSDLEPVFREMDTAETQIRRAEYSEQIFSVTKEALIRMAAGAKARQTPAVLSAQEDALLGLG 216
            AEAA VDRTRLGTPILTES+LLDLLPI G  A+VLR IQ++IEKATILRT+YRR  YS TG +VEQL VPP+VWDRV  V+E ALE L E+R D+EPVFREMD+AE QIRRAEY E +F+  KEAL RMAAGA++R  P VL+AQEDALL LG
Sbjct:   28 AEAAVVDRTRLGTPILTESVLLDLLPIDGVRANVLRAIQDEIEKATILRTLYRRVNYSTTGSVVEQLPVPPAVWDRVLAVSEGALEILEEQRGDIEPVFREMDSAEAQIRRAEYFESVFASAKEALTRMAAGARSRLPPTVLAAQEDALLALG 180          
BLAST of mRNA_H-elongata_contig64985.14086.1 vs. uniprot
Match: A0A6H5KQ41_9PHAE (Peptidylprolyl isomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ41_9PHAE)

HSP 1 Score: 204 bits (518), Expect = 7.890e-59
Identity = 111/153 (72.55%), Postives = 126/153 (82.35%), Query Frame = 0
Query:   64 AEAATVDRTRLGTPILTESILLDLLPISGTGADVLRTIQNDIEKATILRTIYRRGTYSQTGGLVEQLTVPPSVWDRVQFVAERALEYLVERRSDLEPVFREMDTAETQIRRAEYSEQIFSVTKEALIRMAAGAKARQTPAVLSAQEDALLGLG 216
            AEAA VDRTRLGTPILTES+LLDLLPI G  A+VLR IQ +IEKATILRT+YRR  YS TG +VEQL VPP+VWDRV  V+E ALE L E+R  +EPVFREMD+AE QIRRAEY E +F+  KEAL RMAAGA++R  PAVL+AQEDALL LG
Sbjct:  180 AEAAVVDRTRLGTPILTESVLLDLLPIDGVRANVLRAIQEEIEKATILRTLYRRVNYSTTGSVVEQLPVPPAVWDRVLAVSEGALEILEEQRGAIEPVFREMDSAEAQIRRAEYFESVFAAAKEALTRMAAGARSRLPPAVLTAQEDALLALG 332          
BLAST of mRNA_H-elongata_contig64985.14086.1 vs. uniprot
Match: A0A836CJU1_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJU1_9STRA)

HSP 1 Score: 142 bits (359), Expect = 1.550e-36
Identity = 84/152 (55.26%), Postives = 101/152 (66.45%), Query Frame = 0
Query:   64 AEAATVDRTRLGTPILTESILLDLLPISGTGADVLRTIQNDIEKATILRTIYRRGTYSQTGGLVEQLTVPPSVWDRVQFVAERALEYLVERRSDLEPVFREMDTAETQIRRAEYSEQIFSVTKEALIRMAAGAKARQTPAVLSAQEDALLGL 215
            A AA + R +LG+PILTES+LLDLLPI G GAD LR +Q +IEKATILRTIY RG      G V   T+P SVWD++  V   AL  L ERR +L+P FRE+DTAE QIRRAE  E+    T+  L+ +   A+AR   AVL AQ  ALL L
Sbjct:   51 ASAAPLARVKLGSPILTESVLLDLLPIKGAGADALRMVQGEIEKATILRTIYTRGQDYDAAGNV---TIPGSVWDQISKVGNTALAILEERRRELQPTFREVDTAEVQIRRAERGEEELDETRRQLMALTHAAEARNVSAVLDAQSGALLHL 199          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig64985.14086.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LI28_ECTSI1.190e-6072.55Peptidylprolyl isomerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KQ41_9PHAE7.890e-5972.55Peptidylprolyl isomerase n=1 Tax=Ectocarpus sp. CC... [more]
A0A836CJU1_9STRA1.550e-3655.26Peptidylprolyl isomerase n=1 Tax=Tribonema minus T... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig64985contigH-elongata_contig64985:955..3393 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig64985.14086.1mRNA_H-elongata_contig64985.14086.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig64985 955..3393 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig64985.14086.1 ID=prot_H-elongata_contig64985.14086.1|Name=mRNA_H-elongata_contig64985.14086.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=217bp
KDRHPSLSATSPRFGGGKARREGNCGTAAGEGVDRGGFVRTVVSGLVAAP
VVRYAAIQEGNFVAEAATVDRTRLGTPILTESILLDLLPISGTGADVLRT
IQNDIEKATILRTIYRRGTYSQTGGLVEQLTVPPSVWDRVQFVAERALEY
LVERRSDLEPVFREMDTAETQIRRAEYSEQIFSVTKEALIRMAAGAKARQ
TPAVLSAQEDALLGLG*
back to top