prot_H-elongata_contig64967.14084.1 (polypeptide) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig64967.14084.1 vs. uniprot
Match: D7FRC3_ECTSI (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRC3_ECTSI) HSP 1 Score: 98.6 bits (244), Expect = 1.330e-23 Identity = 51/71 (71.83%), Postives = 54/71 (76.06%), Query Frame = 0
Query: 1 MSRDRDRGRYGREDSRERGREIGH-----PGKVSLLVRNLTFRTRTEDVRHIFKDFGDVRDVYLPLDFGTQ 66
MSRDR RG YGR+DSR R PGKVSLLVRNLTFRTR +DV+ IF DFGDVRDVYLPLDFGTQ
Sbjct: 1 MSRDRGRGGYGRDDSRGRDXXXXXXXXSGPGKVSLLVRNLTFRTRVDDVKRIFTDFGDVRDVYLPLDFGTQ 71
BLAST of mRNA_H-elongata_contig64967.14084.1 vs. uniprot
Match: A0A7S2V1C3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1C3_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 5.610e-12 Identity = 25/42 (59.52%), Postives = 36/42 (85.71%), Query Frame = 0
Query: 25 PGKVSLLVRNLTFRTRTEDVRHIFKDFGDVRDVYLPLDFGTQ 66
P VSLLVRN+++RTR ED+R+IF +GD+RDVYLP+D+ ++
Sbjct: 25 PDGVSLLVRNISYRTRAEDLRYIFSKYGDIRDVYLPMDYHSK 66
BLAST of mRNA_H-elongata_contig64967.14084.1 vs. uniprot
Match: A0A4D9CT26_9STRA (RRM domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CT26_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 3.620e-10 Identity = 23/42 (54.76%), Postives = 34/42 (80.95%), Query Frame = 0
Query: 25 PGKVSLLVRNLTFRTRTEDVRHIFKDFGDVRDVYLPLDFGTQ 66
P ++SLLVRNL F TR EDVR +F +G+V+DVY+P+++ T+
Sbjct: 41 PRRISLLVRNLGFDTRQEDVRRLFDKYGEVKDVYIPMNYHTK 82
BLAST of mRNA_H-elongata_contig64967.14084.1 vs. uniprot
Match: A0A7S2BL32_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BL32_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 1.910e-9 Identity = 23/50 (46.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query: 17 ERGREIGHPGKVSLLVRNLTFRTRTEDVRHIFKDFGDVRDVYLPLDFGTQ 66
+R R G G+VSLLVRN+++ R ED+ F+++G++RDVY+P+D+ +Q
Sbjct: 16 DRDRPAGEDGQVSLLVRNISYDCRKEDLADRFREYGEIRDVYVPVDYYSQ 65
BLAST of mRNA_H-elongata_contig64967.14084.1 vs. uniprot
Match: A0A061RGN7_9CHLO (FUS-interacting serine-arginine-rich protein 1 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RGN7_9CHLO) HSP 1 Score: 58.9 bits (141), Expect = 2.840e-9 Identity = 27/57 (47.37%), Postives = 39/57 (68.42%), Query Frame = 0
Query: 10 YGREDSRERGREIGHPGKVSLLVRNLTFRTRTEDVRHIFKDFGDVRDVYLPLDFGTQ 66
YGRE+ P + S+L+RNL+ TRTED+R++ + +G VRDVYLPLD+ T+
Sbjct: 6 YGREE----------PTRTSILLRNLSRSTRTEDIRYLSEKYGPVRDVYLPLDYYTK 52
BLAST of mRNA_H-elongata_contig64967.14084.1 vs. uniprot
Match: A0A7S3HCI8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HCI8_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 3.000e-9 Identity = 23/44 (52.27%), Postives = 32/44 (72.73%), Query Frame = 0
Query: 23 GHPGKVSLLVRNLTFRTRTEDVRHIFKDFGDVRDVYLPLDFGTQ 66
G SLLVRNL++R R +++R IF +GD+RDVY+P D+ TQ
Sbjct: 40 GPEATTSLLVRNLSYRVRADEIRRIFVRYGDIRDVYIPQDYHTQ 83
BLAST of mRNA_H-elongata_contig64967.14084.1 vs. uniprot
Match: S7V383_TOXGG (RNA recognition motif-containing protein n=15 Tax=Toxoplasma gondii TaxID=5811 RepID=S7V383_TOXGG) HSP 1 Score: 58.5 bits (140), Expect = 9.280e-9 Identity = 26/49 (53.06%), Postives = 38/49 (77.55%), Query Frame = 0
Query: 17 ERGREIGHPGKVSLLVRNLTFRTRTEDVRHIFKDFGDVRDVYLPLDFGT 65
+RGR+ ++SLLVRNL+FR+ ++VR F++FG +RDVYLPLD+ T
Sbjct: 6 DRGRQ-----RLSLLVRNLSFRSSPDEVRAAFEEFGPIRDVYLPLDYHT 49
BLAST of mRNA_H-elongata_contig64967.14084.1 vs. uniprot
Match: A0A061RID6_9CHLO (FUS-interacting serine-arginine-rich protein 1 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RID6_9CHLO) HSP 1 Score: 58.9 bits (141), Expect = 1.390e-8 Identity = 27/57 (47.37%), Postives = 39/57 (68.42%), Query Frame = 0
Query: 10 YGREDSRERGREIGHPGKVSLLVRNLTFRTRTEDVRHIFKDFGDVRDVYLPLDFGTQ 66
YGRE+ P + S+L+RNL+ TRTED+R++ + +G VRDVYLPLD+ T+
Sbjct: 6 YGREE----------PTRTSILLRNLSRSTRTEDIRYLSEKYGPVRDVYLPLDYYTK 52
BLAST of mRNA_H-elongata_contig64967.14084.1 vs. uniprot
Match: A0A0F7V4X2_TOXGV (RNA recognition motif-containing protein n=1 Tax=Toxoplasma gondii (strain ATCC 50861 / VEG) TaxID=432359 RepID=A0A0F7V4X2_TOXGV) HSP 1 Score: 58.5 bits (140), Expect = 2.110e-8 Identity = 26/49 (53.06%), Postives = 38/49 (77.55%), Query Frame = 0
Query: 17 ERGREIGHPGKVSLLVRNLTFRTRTEDVRHIFKDFGDVRDVYLPLDFGT 65
+RGR+ ++SLLVRNL+FR+ ++VR F++FG +RDVYLPLD+ T
Sbjct: 6 DRGRQ-----RLSLLVRNLSFRSSPDEVRAAFEEFGPIRDVYLPLDYHT 49
BLAST of mRNA_H-elongata_contig64967.14084.1 vs. uniprot
Match: F0VZD6_9STRA (Splicing factor putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0VZD6_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 4.920e-8 Identity = 21/39 (53.85%), Postives = 33/39 (84.62%), Query Frame = 0
Query: 28 VSLLVRNLTFRTRTEDVRHIFKDFGDVRDVYLPLDFGTQ 66
+SLL+RN++ R R++++R F++FGDVRDVY+P DF T+
Sbjct: 7 ISLLIRNISRRMRSDELRKTFEEFGDVRDVYIPRDFHTR 45 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig64967.14084.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig64967.14084.1 ID=prot_H-elongata_contig64967.14084.1|Name=mRNA_H-elongata_contig64967.14084.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=67bpback to top |