prot_H-elongata_contig64658.14059.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig64658.14059.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI) HSP 1 Score: 103 bits (257), Expect = 1.330e-21 Identity = 95/207 (45.89%), Postives = 103/207 (49.76%), Query Frame = 0
Query: 2 CGGSGCSS-----FGTTCCISDIEETCSETGEAPCYIDDDVETETS-----------SGS-TCSNGFDGVESSSGKYCCTDDCSACGGSGCSS-----FGTTCCISDIEETCSETGEAPCYIDDDDSPSPTSSTTP-TGS-TCSNGFDGVESSSGNYCCTDDCSACGGSXXXXXXXXXX-----ISDIEEACSETGEAPCYIDDDST 179
CGGSGCS G CC SDI CS TG APC +D D SGS TC DGV G YCC+ C CGGSGCS G CC SDI CS TG APC +D D SP+ +GS TC DGV G+YCC+ C CGG XXXXXXX SDI CS TG APC +D DST
Sbjct: 178 CGGSGCSDRGGGLTGADCCTSDISNLCSVTGAAPCIVDGDTSPTXXXXXXXXXXXXXSGSFTC----DGVLK--GDYCCSAGCVECGGSGCSDRGGGLTGADCCTSDISNLCSVTGAAPCIVDGDTSPTXXXXXXXXSGSFTC----DGVLK--GDYCCSAGCGECGGXXXXXXXXGLTGADCCTSDISNLCSVTGAAPCIVDGDST 372
BLAST of mRNA_H-elongata_contig64658.14059.1 vs. uniprot
Match: D8LML5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LML5_ECTSI) HSP 1 Score: 60.5 bits (145), Expect = 1.650e-7 Identity = 49/155 (31.61%), Postives = 71/155 (45.81%), Query Frame = 0
Query: 37 VETETSSGSTCSNGFDGVESSSGKYCCTDDCSACGGSGCSSFGTT------CCISDIEET---CSETGEAPCYIDDDDSPSPTSSTTPTGSTCSNGFDGVESSSGNYCCTDDCS-ACGGSXXXXXXXXXX-------ISDIEEACSETGEAPCYI 174
V T T +G+ CSNG +G++S+S CC ++C CGG GC+ T+ CC ++I E+ C + APC I T++ S C NG GV+ + CC C +CGG I + CS+T APC +
Sbjct: 20 VGTMTPAGAVCSNGLEGIQSTSLDACCVEECGLCGGVGCTPANTSSLTSADCCATEIIESGTLCEVSMAAPCII--------TTAAASNDSVCENGQTGVQDPDTDVCCPLVCGDSCGGEGCGSLAGVDATQCCSNLIIESGAVCSDTVSAPCVV 166
BLAST of mRNA_H-elongata_contig64658.14059.1 vs. uniprot
Match: A0A6H5K7R2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7R2_9PHAE) HSP 1 Score: 58.5 bits (140), Expect = 2.590e-6 Identity = 48/155 (30.97%), Postives = 69/155 (44.52%), Query Frame = 0
Query: 37 VETETSSGSTCSNGFDGVESSSGKYCCTDDCSACGGSGCSSFGTT------CCISDIEET---CSETGEAPCYIDDDDSPSPTSSTTPTGSTCSNGFDGVESSSGNYCCTDDCS-ACGGSXXXXXXXXXX-------ISDIEEACSETGEAPCYI 174
V T T +G+ CSNG +G++S+S CC + C CGG C+ T+ CC ++I E+ C + APC I T++ S C NG GV + CC +C +CGG I + CS+T APC +
Sbjct: 20 VGTMTPAGAVCSNGLEGIQSTSLDVCCVEGCEVCGGVDCTPANTSSLTSADCCATEIVESGTFCDVSMAAPCII--------TTAAAANDSVCENGQTGVPDPDTDVCCPLECGDSCGGEGCGSIPGVNATQCCSSLIIESGAVCSDTVSAPCVV 166
BLAST of mRNA_H-elongata_contig64658.14059.1 vs. uniprot
Match: D8LRN1_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LRN1_ECTSI) HSP 1 Score: 53.9 bits (128), Expect = 5.980e-5 Identity = 34/79 (43.04%), Postives = 48/79 (60.76%), Query Frame = 0
Query: 44 GSTCSNGFDGVESSSGKYCCTDDCSACGGSGCSSFGT-------TCCISDIEET---CSETGEAPCYIDDDDSPSPTSS 112
G TC+NG +G++ + G CC C C G GC++FG+ +CC + I+ + CSETG APC ID++ PSPT S
Sbjct: 22 GDTCTNGIEGIDGN-GVVCCPLGCGRCAGEGCTAFGSENGLGADSCCGNAIKASGRLCSETGSAPCIIDEE-GPSPTPS 98 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig64658.14059.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig64658.14059.1 ID=prot_H-elongata_contig64658.14059.1|Name=mRNA_H-elongata_contig64658.14059.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=242bpback to top |