prot_H-elongata_contig64621.14055.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig64621.14055.1
Unique Nameprot_H-elongata_contig64621.14055.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length34
Homology
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BLAST of mRNA_H-elongata_contig64621.14055.1 vs. uniprot
Match: D7FVC4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVC4_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 3.620e-9
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 0 
Query:    1 RHHYLKGLQGCSAGLLACVQKAFEDLYILLRSLL 34
            RHHYLKGL+GCSAGLLA VQ AFEDLY LLR+LL
Sbjct: 2482 RHHYLKGLEGCSAGLLARVQGAFEDLYGLLRTLL 2515
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BLAST of mRNA_H-elongata_contig64621.14055.1 vs. uniprot
Match: A0A6H5KD94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD94_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 2.370e-8
Identity = 28/34 (82.35%), Postives = 30/34 (88.24%), Query Frame = 0 
Query:    1 RHHYLKGLQGCSAGLLACVQKAFEDLYILLRSLL 34
            RHHYLKGL+GCSAGLLA VQ AFEDLY  LR+LL
Sbjct: 2264 RHHYLKGLEGCSAGLLARVQGAFEDLYGQLRTLL 2297
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig64621.14055.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FVC4_ECTSI3.620e-985.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KD94_9PHAE2.370e-882.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig64621contigH-elongata_contig64621:151..252 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig64621.14055.1mRNA_H-elongata_contig64621.14055.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig64621 151..252 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig64621.14055.1 ID=prot_H-elongata_contig64621.14055.1|Name=mRNA_H-elongata_contig64621.14055.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=34bp
RHHYLKGLQGCSAGLLACVQKAFEDLYILLRSLL
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