prot_H-elongata_contig64406.14029.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig64406.14029.1
Unique Nameprot_H-elongata_contig64406.14029.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length189
Homology
BLAST of mRNA_H-elongata_contig64406.14029.1 vs. uniprot
Match: D7G462_ECTSI (Nicolin 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G462_ECTSI)

HSP 1 Score: 221 bits (563), Expect = 1.690e-70
Identity = 113/188 (60.11%), Postives = 134/188 (71.28%), Query Frame = 0
Query:    3 PRKVPVLVGPLVRGRQTKPTPTYFEISFLNKDSGESPPR-VDAIVFRNFYCSHITIKQRRQQ-QLERAPGIGKEGSVWATVLRDRPLMEDPHYEDDAQHWHVVAVEELDHEEYDADSAAPLRIYLHQPSPMWKTFGLRHVKCVIWS--GLSSTAPEEKPTSDRSVVTSEVDLAHLCRGISKQVQIFGD 186
            P  +P  +GPLVR RQT P PTYFE+SFL       P R +DAIVF+NFYCSHITIKQRRQ+     A   GK+G  W T+LRDRPLMEDPH+EDDAQ+WHVV  EE D EEYDA+S AP+RIYL+Q SPMWKTFGL HVK V WS  G S+   +++  +D +       L  LCRGIS+QV+IFGD
Sbjct:   14 PYPIPAFIGPLVRSRQTTPCPTYFEVSFLESKLPRKPARRLDAIVFKNFYCSHITIKQRRQRFDTATAADCGKDGDPWLTILRDRPLMEDPHHEDDAQYWHVVRSEEFDPEEYDAESTAPIRIYLYQSSPMWKTFGLHHVKAVGWSRAGSSNGGRDDEREADGN-------LGDLCRGISEQVKIFGD 194          
BLAST of mRNA_H-elongata_contig64406.14029.1 vs. uniprot
Match: A0A836CPK3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPK3_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 6.580e-22
Identity = 54/146 (36.99%), Postives = 80/146 (54.79%), Query Frame = 0
Query:    5 KVPVLVGPLVRGRQTKPTPTYFEISFLNKDSGESPPRVDAIVFRNFYCSHITIKQRRQQQLERAPGIGKEGSVWATVLRDRPLMEDPHYEDDAQHWHVVAVEELDHEEYDADSAAP---------LRIYLHQPSPMWKTFGLRHVK 141
            ++P+L+GPLV+ R  +P   YFE++ L     ++PP     VF+N+Y SH+T++ +R        G   +   W TVL   PLM DPHYE DAQHWHV+ + +   E  + +             +R+ LHQ SP+W+   LRH K
Sbjct:   14 ELPILLGPLVQTRSQRPCLLYFEVTLLQPK--QTPPGA-VFVFQNYYASHVTLRVQR--------GGASDAFDWETVLDRHPLMRDPHYEGDAQHWHVLPLPQRVVELANGNEGGGGEGDGGVRCVRVCLHQSSPLWERVELRHFK 148          
BLAST of mRNA_H-elongata_contig64406.14029.1 vs. uniprot
Match: A0A7S4DFE1_9EUKA (Hypothetical protein n=3 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DFE1_9EUKA)

HSP 1 Score: 93.6 bits (231), Expect = 1.420e-20
Identity = 53/138 (38.41%), Postives = 78/138 (56.52%), Query Frame = 0
Query:    5 KVPVLVGPLVRGRQTKPTPTYFEISFLNKDSGESPPRVDAIVFRNFYCSHITIKQRRQQQLERAPGIGKEGSVWATVLRDRPLMEDPHYEDDAQHWHVVAVEELDHEEYDADSAAPLRIYLHQPSPMWKTFGLRHVKC 142
            +VP  V P V   + +P+  Y ++SF       +P  +  + FRN+YC +ITIK+          G GK+  VW T+L    LM+DPH+EDDAQ  HV+   + +  ++D      LR YL+QPSP W++FGLR + C
Sbjct:    7 EVPFKVHPQVVKDEKRPSIIYQQVSFT------TPIELRFLCFRNYYCGYITIKRFM------VDGTGKK--VWQTILNRHQLMKDPHFEDDAQARHVIESSQFN-SKFDGGLIKALRFYLYQPSPSWRSFGLRQLTC 129          
BLAST of mRNA_H-elongata_contig64406.14029.1 vs. uniprot
Match: A0A0H5QY21_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QY21_9EUKA)

HSP 1 Score: 92.4 bits (228), Expect = 4.250e-20
Identity = 55/135 (40.74%), Postives = 68/135 (50.37%), Query Frame = 0
Query:   24 TYFEISF-LNKDSGESPPR---------------VDAIVFRNFYCSHITIKQRRQQQLERAPGIGKEGSVWATVLRDRPLMEDPHYEDDAQHWHVVAVEELDHEEYDADSAAPLRIYLHQPSPMWKTFGLRHVKC 142
            TY E+S+ +  DS  S PR               +D IVFRNFYC  +TI Q        A G       W T+LR   LM DPHYEDDAQ+ H ++ +E +           LR YL QPSP WK+FGLR + C
Sbjct:    7 TYQELSYTVTNDSAHSGPRPCLIYQEIQFSAPANIDHIVFRNFYCFALTITQST------ANGSSDGAPYWTTILRSYKLMTDPHYEDDAQYSHRISSDEFEEPFSREVPVYALRFYLEQPSPNWKSFGLRDLSC 135          
BLAST of mRNA_H-elongata_contig64406.14029.1 vs. uniprot
Match: A0A3P3Y8X5_PLABS (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y8X5_PLABS)

HSP 1 Score: 94.4 bits (233), Expect = 4.130e-19
Identity = 50/123 (40.65%), Postives = 69/123 (56.10%), Query Frame = 0
Query:   20 KPTPTYFEISFLNKDSGESPPRVDAIVFRNFYCSHITIKQRRQQQLERAPGIGKEGSVWATVLRDRPLMEDPHYEDDAQHWHVVAVEELDHEEYDADSAAPLRIYLHQPSPMWKTFGLRHVKC 142
            +P   Y EI+F      + P  ++ I FRN+YC+ I+IKQ     ++ A G   + S W  +L  R LM D HYEDDAQH+H +++ E             LR YL QPSP W++FGLR +KC
Sbjct:   62 RPCVIYQEIAF------DKPANIECIKFRNYYCASISIKQLTIPLVD-AFGTAAKESDWTAILSSRQLMTDAHYEDDAQHYHTISISEFGACFLKEIPVHALRFYLEQPSPNWRSFGLRDLKC 177          
BLAST of mRNA_H-elongata_contig64406.14029.1 vs. uniprot
Match: A0A7S3JF62_9SPIT (Hypothetical protein n=1 Tax=Euplotes harpa TaxID=151035 RepID=A0A7S3JF62_9SPIT)

HSP 1 Score: 84.0 bits (206), Expect = 2.130e-17
Identity = 45/121 (37.19%), Postives = 75/121 (61.98%), Query Frame = 0
Query:   20 KPTPTYFEISFLNKDSGESPPRVDAIVFRNFYCSHITIKQRRQQQLERAPGIGKEGSVWATVLRDRPLMEDPHYEDDAQHWHVVAVEELDHEEYDADSAAPLRIYLHQPSPMWKTFGLRHV 140
            KP+  Y++I+F  KDSG      + ++F+NFY + ITIKQ + +   +A    ++ + W T+L +  LM + H+E DAQ+WH++  E L +E++D    + LRI+L+ PSP W  F L+ +
Sbjct:   19 KPSRAYYDINFNAKDSG-----FNYMLFQNFYVASITIKQYKGENETKAEL--EKAANWKTILPNYKLMNNAHFEGDAQNWHIIGTE-LFNEKFDRSDLSVLRIFLNAPSPSWLDFYLKSI 131          
BLAST of mRNA_H-elongata_contig64406.14029.1 vs. uniprot
Match: A0A7S4A4M5_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A4M5_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 3.570e-16
Identity = 53/147 (36.05%), Postives = 80/147 (54.42%), Query Frame = 0
Query:   14 VRGRQTKPTPTYFEISF----LNKDSGESPPRVDAIVFRNFYCSHITIKQRRQQQLERAPGIGKEGSVWATVLRDRPLMEDPHYEDDAQHWHVVAVEELDHEEYDA---------DSAAP---LRIYLHQPSPMWKTFGLRHVKCVI 144
            ++ R  +P P Y +I+F    + K +G +P R+DAI FRN Y + I++ QR+ +          EG VW  VLR++ LM D H EDDAQ    +A  +  +  +D+         D   P   LR  L QPSP W+++ L+HVKC++
Sbjct:   80 LKARSDEPCPVYQDITFDAEAVIKAAGAAP-RLDAISFRNHYVASISVMQRQARP---------EGLVWVPVLREKHLMRDAHCEDDAQATTTLATSDFTN--FDSGLCGVAAGDDEGLPVGSLRFRLRQPSPTWRSYELKHVKCIM 214          
BLAST of mRNA_H-elongata_contig64406.14029.1 vs. uniprot
Match: A0A7S0TAL6_9STRA (Hypothetical protein n=1 Tax=Chrysocystis fragilis TaxID=1411660 RepID=A0A7S0TAL6_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 3.940e-13
Identity = 48/140 (34.29%), Postives = 68/140 (48.57%), Query Frame = 0
Query:   17 RQTKPTPTYFEISFLNKDSGESPPRVDAIVFRNFYCSHITIKQRRQQQLERAPGIGKEGSVWATVLRDRPLMEDPHYEDDAQHWHVVAVEELDHEEYDA-----------DSAAPL---RIYLHQPSPMWKTFGLRHVKC 142
            R  +P P Y ++ F+ K   +   R+D IVFRN Y + I + QR+ +          +G+ W  VL D  LM+ PH+EDDAQ WH +         +D+              APL   R  + QPS MW T  LRH++C
Sbjct:   33 RAERPCPIYQDVRFVPK---KEHARLDFIVFRNHYVASIAVYQRQAEG---------DGARWVEVLGDLCLMKRPHFEDDAQAWHTLYTSRF-RPAFDSHLCSGAAAASRSGEAPLGSLRFKIRQPSMMWSTIELRHLRC 159          
BLAST of mRNA_H-elongata_contig64406.14029.1 vs. uniprot
Match: A0A8J5XP54_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XP54_DIALT)

HSP 1 Score: 69.3 bits (168), Expect = 6.750e-11
Identity = 42/116 (36.21%), Postives = 57/116 (49.14%), Query Frame = 0
Query:   29 SFLNKDSGESPP-RVDAIVFRNFYCSHITIKQRRQQQLERAPGIGKEGSVWATVLRDRPLMEDPHYEDDAQHWHVVAVEELDHEEYDA-DSAAPLRIYLHQPSPMWKTFGLRHVKC 142
            S L ++   SPP R+ AI F+N+Y + + +  R +         G   S W   L    LM+DPH+EDDAQ +H   +        D  DSA  LR+   QPSP W  FG R + C
Sbjct:   28 SRLTQELYFSPPARLRAITFQNYYSAAVAVHVRGRALPPATDLSGASASTWHVALETTQLMDDPHFEDDAQRFHSFDLTSPQLAPVDVLDSAHALRLTYFQPSPAWADFGARRLAC 143          
BLAST of mRNA_H-elongata_contig64406.14029.1 vs. uniprot
Match: A0A665TWE0_ECHNA (Nicolin 1 n=3 Tax=Carangiformes TaxID=1489907 RepID=A0A665TWE0_ECHNA)

HSP 1 Score: 66.2 bits (160), Expect = 5.750e-10
Identity = 37/132 (28.03%), Postives = 65/132 (49.24%), Query Frame = 0
Query:   23 PTYFEISFLNKDSGES-------------PPRVDAIVFRNFYCSHITIKQRRQQQLERAPGIGKEGSVWATVLRDRPLMEDPHYEDDAQHWHVVAVEELDHEEYDADSAAPLRIYLHQPSPMWKTFGLRHVK 141
            P Y +I     D+  S                ++ I F+N+Y +++T++  R+   + AP      + W TVLRD PLM++PH E  +Q ++ +   ++   + + D  A +R+ L QPS  W  F L ++K
Sbjct:   18 PVYLQIGDTKTDASHSGICVVDVTLPFGKAANIEEITFKNYYTAYVTVRLLRRSPGQDAP------AKWCTVLRDLPLMDNPHTEGGSQDYYSIHRAQM---QVEPDHVASVRLILRQPSSAWLNFSLENIK 140          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig64406.14029.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D7G462_ECTSI1.690e-7060.11Nicolin 1 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A836CPK3_9STRA6.580e-2236.99Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4DFE1_9EUKA1.420e-2038.41Hypothetical protein n=3 Tax=Lotharella globosa Ta... [more]
A0A0H5QY21_9EUKA4.250e-2040.74Uncharacterized protein (Fragment) n=1 Tax=Spongos... [more]
A0A3P3Y8X5_PLABS4.130e-1940.65Uncharacterized protein n=2 Tax=Plasmodiophora bra... [more]
A0A7S3JF62_9SPIT2.130e-1737.19Hypothetical protein n=1 Tax=Euplotes harpa TaxID=... [more]
A0A7S4A4M5_9STRA3.570e-1636.05Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S0TAL6_9STRA3.940e-1334.29Hypothetical protein n=1 Tax=Chrysocystis fragilis... [more]
A0A8J5XP54_DIALT6.750e-1136.21Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A665TWE0_ECHNA5.750e-1028.03Nicolin 1 n=3 Tax=Carangiformes TaxID=1489907 RepI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040235Nicolin-1PANTHERPTHR31239FAMILY NOT NAMEDcoord: 38..171
NoneNo IPR availablePANTHERPTHR31239:SF2NICOLIN-1coord: 38..171
NoneNo IPR availablePRODOMPD868899coord: 14..141
e-value: 2.0E-10
score: 157.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig64406contigH-elongata_contig64406:841..3114 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig64406.14029.1mRNA_H-elongata_contig64406.14029.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig64406 841..3114 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig64406.14029.1 ID=prot_H-elongata_contig64406.14029.1|Name=mRNA_H-elongata_contig64406.14029.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=189bp
MIPRKVPVLVGPLVRGRQTKPTPTYFEISFLNKDSGESPPRVDAIVFRNF
YCSHITIKQRRQQQLERAPGIGKEGSVWATVLRDRPLMEDPHYEDDAQHW
HVVAVEELDHEEYDADSAAPLRIYLHQPSPMWKTFGLRHVKCVIWSGLSS
TAPEEKPTSDRSVVTSEVDLAHLCRGISKQVQIFGDTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040235Nicolin-1