prot_H-elongata_contig6440.14027.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6440.14027.1
Unique Nameprot_H-elongata_contig6440.14027.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length203
Homology
BLAST of mRNA_H-elongata_contig6440.14027.1 vs. uniprot
Match: A0A6H5JDA2_9PHAE (Mitochondrial inner membrane protease subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDA2_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 1.130e-46
Identity = 93/196 (47.45%), Postives = 117/196 (59.69%), Query Frame = 0
Query:    1 LGRLPGRR--LDLRRNDVVVFRPPAASRILFAEL---SAGIDDRLVG--GNSRSSLRVKQTWIRWRQHQRITLHKSLDFTKRVVALSGDQVAVTKGLLYINGQATDIFAGNLSAQRSPRRIKNLRCFKGNNEHQHYSEASYSLTATVVPKDHVWVLGDHRDVSFDSHVWGPLPIQNVIGCIRGRYWPVHRAAWFQR 189
            LG+LPGR   L LRR D+V+F PP ASR ++AEL   ++G         G+ R    +  T     + +R  L+ SLDFTKRVVA++GD VAV +G+LY+N    D                         E Q  + ASYS   TVVPKDH+ VLGD+RD SFDSHVWGPLP++NVIGC R RYWPV+RAAW +R
Sbjct:   57 LGKLPGRPPGLGLRRGDIVIFSPPEASRNMYAELLRLASGATTATPNPVGDRRKGHILSLTRC---ERRRSPLNSSLDFTKRVVAVAGDHVAVRRGVLYVNESPAD-------------------------ERQRSARASYSFGPTVVPKDHIIVLGDNRDASFDSHVWGPLPVRNVIGCARARYWPVNRAAWLKR 224          
BLAST of mRNA_H-elongata_contig6440.14027.1 vs. uniprot
Match: I0YPI6_COCSC (LexA/Signal peptidase (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YPI6_COCSC)

HSP 1 Score: 85.5 bits (210), Expect = 1.180e-17
Identity = 45/112 (40.18%), Postives = 61/112 (54.46%), Query Frame = 0
Query:   72 FTKRVVALSGDQVAVTKGLLYINGQATDIFAGNLSAQRSPRRIKNLRCFKGNNEHQHYSEASYSLTATVVPKDHVWVLGDHRDVSFDSHVWGPLPIQNVIGCIRGRYWPVHR 183
            F KR+VA++GD V V  G L++NGQ                     RC     E   Y +  Y+L    VP DHV+V+GD+R+ SFDSH+WGPLP +N+I      YWP++R
Sbjct:   63 FIKRIVAVAGDTVEVKNGQLFVNGQP--------------------RC-----EKYIYEKPRYTLKPQTVPADHVFVMGDNRNNSFDSHIWGPLPQKNIIARAVFTYWPLNR 149          
BLAST of mRNA_H-elongata_contig6440.14027.1 vs. uniprot
Match: Q45NI0_MEDSA (Chloroplast thylakoidal processing peptidase (Fragment) n=1 Tax=Medicago sativa TaxID=3879 RepID=Q45NI0_MEDSA)

HSP 1 Score: 83.2 bits (204), Expect = 9.270e-17
Identity = 46/109 (42.20%), Postives = 56/109 (51.38%), Query Frame = 0
Query:   72 FTKRVVALSGDQVAVTKGLLYINGQATDIFAGNLSAQRSPRRIKNLRCFKGNNEHQHYSEASYSLTATVVPKDHVWVLGDHRDVSFDSHVWGPLPIQNVIGCIRGRYWP 180
            F KRVVA +GD V V  G L +NG A D                         E       +Y L   VVPK HV+V+GD+R+ SFDSH WGPLPI+N++G    RYWP
Sbjct:   47 FIKRVVAKAGDVVEVRDGKLLVNGVAED-------------------------EEFVLEPLAYELAPMVVPKGHVFVMGDNRNKSFDSHNWGPLPIENIVGRSMFRYWP 130          
BLAST of mRNA_H-elongata_contig6440.14027.1 vs. uniprot
Match: A0A8J9WNW0_9CHLO (Chloroplast processing peptidase n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WNW0_9CHLO)

HSP 1 Score: 86.7 bits (213), Expect = 1.240e-16
Identity = 46/112 (41.07%), Postives = 63/112 (56.25%), Query Frame = 0
Query:   72 FTKRVVALSGDQVAVTKGLLYINGQATDIFAGNLSAQRSPRRIKNLRCFKGNNEHQHYSEASYSLTATVVPKDHVWVLGDHRDVSFDSHVWGPLPIQNVIGCIRGRYWPVHR 183
            F KR+VA+ GD V V  G L++NG+                     RC K  NE     + +Y+L    VP +HV+V+GD+R+ SFDSH+WGPLP++NVIG     YWP+ R
Sbjct:  240 FIKRIVAVGGDTVEVKNGQLFVNGEP--------------------RCEKYINE-----KPAYTLPLVKVPPEHVFVMGDNRNNSFDSHIWGPLPVKNVIGRAVFTYWPLTR 326          
BLAST of mRNA_H-elongata_contig6440.14027.1 vs. uniprot
Match: A0A7S4DYH9_9EUKA (Mitochondrial inner membrane protease subunit n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DYH9_9EUKA)

HSP 1 Score: 84.3 bits (207), Expect = 4.890e-16
Identity = 48/125 (38.40%), Postives = 67/125 (53.60%), Query Frame = 0
Query:   72 FTKRVVALSGDQVAVTKGLLYINGQATDIFAGNLSAQRSPRRIKNLRCFKGNNEHQHYSEASYSLTATVVPKDHVWVLGDHRDVSFDSHVWGPLPIQNVIGCIRGRYWPVHRAAWFQRDSASSVQ 196
            F KR+VA  GD V V++G L +NG             R    IK+                SYSL    VPK +V+V+GD+RD S+DSH+WGPLP++N+IG    +YWP   +AW +   A S++
Sbjct:  196 FIKRIVATEGDTVEVSRGRLIVNGIV-----------REEPYIKDGAI------------KSYSLDKVTVPKGYVFVMGDNRDNSYDSHIWGPLPVKNIIGRASWKYWPP--SAWGEVTRADSLK 295          
BLAST of mRNA_H-elongata_contig6440.14027.1 vs. uniprot
Match: A0A438DS05_VITVI (Chloroplast processing peptidase n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438DS05_VITVI)

HSP 1 Score: 81.3 bits (199), Expect = 9.610e-16
Identity = 45/124 (36.29%), Postives = 64/124 (51.61%), Query Frame = 0
Query:   72 FTKRVVALSGDQVAVTKGLLYINGQATDIFAGNLSAQRSPRRIKNLRCFKGNNEHQHYSEASYSLTATVVPKDHVWVLGDHRDVSFDSHVWGPLPIQNVIGCIRGRYWPVHRAAWFQRDSASSV 195
            F KR+VA  GD V V +G L +NG                            NE+  +   SYS+T   VP++ V+V+GD+R+ S+DSHVWGPLP +N++G    RYWP +R      D+  +V
Sbjct:   53 FIKRIVAKEGDTVEVREGKLIVNGVVR-------------------------NENFIFEPPSYSMTPIHVPENAVFVMGDNRNNSYDSHVWGPLPAKNILGRSIFRYWPPNRIGGTVSDAGCAV 151          
BLAST of mRNA_H-elongata_contig6440.14027.1 vs. uniprot
Match: UPI0016800C66 (Signal peptidase I n=2 Tax=Cyanobium sp. FACHB-13342 TaxID=2692793 RepID=UPI0016800C66)

HSP 1 Score: 81.6 bits (200), Expect = 1.270e-15
Identity = 45/115 (39.13%), Postives = 59/115 (51.30%), Query Frame = 0
Query:   74 KRVVALSGDQVAVTKGLLYINGQATDIFAGNLSAQRSPRRIKNLRCFKGNNEHQHYSEASYSLTATVVPKDHVWVLGDHRDVSFDSHVWGPLPIQNVIGCIRGRYWPVHRAAWFQ 188
            KRVVA +GD++ V +G+L+ NG    I   + SA+                         YSL    VP DH+ VLGD+R+ S DSH+WGPLP   VIG    RYWP +R  W +
Sbjct:  107 KRVVAQAGDRIEVRQGVLWRNGSPAPI---DWSAE----------------------PMDYSLAPLTVPPDHLMVLGDNRNASLDSHLWGPLPRDAVIGTAVLRYWPANRMGWLR 196          
BLAST of mRNA_H-elongata_contig6440.14027.1 vs. uniprot
Match: A0A445DXM4_ARAHY (Peptidase_S26 domain-containing protein n=5 Tax=Arachis TaxID=3817 RepID=A0A445DXM4_ARAHY)

HSP 1 Score: 83.2 bits (204), Expect = 2.010e-15
Identity = 48/131 (36.64%), Postives = 72/131 (54.96%), Query Frame = 0
Query:   72 FTKRVVALSGDQVAVTKGLLYING-QATDIFAGNLSAQRSPRRIKNLRCFKGNNEHQHYSEA-SYSLTATVVPKDHVWVLGDHRDVSFDSHVWGPLPIQNVIGCIRGRYWPVHRAAWFQRDSASSVQARAD 200
            F KR++A  GD V V KG L +NG + ++ F     +      + +  C K       +SE  S  L    VP+++V+V+GD+R+ S+DSHVWGPLP +N+IG    RYWP +R A    +    V+ + D
Sbjct:  203 FIKRIIAKGGDIVEVRKGRLIVNGVERSEKFILEPPSYEMKPTVSSPFCIK-----TQFSETPSIPLCNVRVPENYVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWPPNRIAGTVSEDTCPVETKQD 328          
BLAST of mRNA_H-elongata_contig6440.14027.1 vs. uniprot
Match: A0A2P6V7F2_9CHLO (Chloroplast processing peptidase-like isoform X1 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V7F2_9CHLO)

HSP 1 Score: 82.8 bits (203), Expect = 2.130e-15
Identity = 46/126 (36.51%), Postives = 63/126 (50.00%), Query Frame = 0
Query:   72 FTKRVVALSGDQVAVTKGLLYINGQATDIFAGNLSAQRSPRRIKNLRCFKGNNEHQHYSEASYSLTATVVPKDHVWVLGDHRDVSFDSHVWGPLPIQNVIGCIRGRYWPVHRAAWFQRDSASSVQA 197
            F KR+VA++GD V V  G L +NGQ+                           E   Y    Y L    VP+ HV+V+GD+R+ S+DSH+WGPLP +N+IG    +YWP+ +  W      S VQA
Sbjct:  192 FIKRIVAVAGDTVEVRGGRLIVNGQSRT-------------------------EPYIYEMPKYELPLLTVPEGHVFVMGDNRNNSYDSHIWGPLPAENIIGRACWKYWPLTK--WGGLPDYSDVQA 290          
BLAST of mRNA_H-elongata_contig6440.14027.1 vs. uniprot
Match: A0A1D1ZWR9_AUXPR (Peptidase_S26 domain-containing protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D1ZWR9_AUXPR)

HSP 1 Score: 81.3 bits (199), Expect = 2.430e-15
Identity = 40/110 (36.36%), Postives = 61/110 (55.45%), Query Frame = 0
Query:   72 FTKRVVALSGDQVAVTKGLLYINGQATDIFAGNLSAQRSPRRIKNLRCFKGNNEHQHYSEASYSLTATVVPKDHVWVLGDHRDVSFDSHVWGPLPIQNVIGCIRGRYWPV 181
            F KRVVA++GD V V KG L++NG+                R++                 +Y + +  VP  HV+V+GD+R+ S+DSH+WGPLP++NV+G    +YWP+
Sbjct:  116 FVKRVVAVAGDTVEVKKGALFVNGEE---------------RVEEYLA----------ERPAYEMESLTVPPRHVFVMGDNRNNSYDSHLWGPLPLENVVGRAVWKYWPL 200          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6440.14027.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JDA2_9PHAE1.130e-4647.45Mitochondrial inner membrane protease subunit n=1 ... [more]
I0YPI6_COCSC1.180e-1740.18LexA/Signal peptidase (Fragment) n=1 Tax=Coccomyxa... [more]
Q45NI0_MEDSA9.270e-1742.20Chloroplast thylakoidal processing peptidase (Frag... [more]
A0A8J9WNW0_9CHLO1.240e-1641.07Chloroplast processing peptidase n=1 Tax=Coccomyxa... [more]
A0A7S4DYH9_9EUKA4.890e-1638.40Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A438DS05_VITVI9.610e-1636.29Chloroplast processing peptidase n=2 Tax=Vitis vin... [more]
UPI0016800C661.270e-1539.13Signal peptidase I n=2 Tax=Cyanobium sp. FACHB-133... [more]
A0A445DXM4_ARAHY2.010e-1536.64Peptidase_S26 domain-containing protein n=5 Tax=Ar... [more]
A0A2P6V7F2_9CHLO2.130e-1536.51Chloroplast processing peptidase-like isoform X1 n... [more]
A0A1D1ZWR9_AUXPR2.430e-1536.36Peptidase_S26 domain-containing protein n=2 Tax=Au... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 202..202
NoneNo IPR availableGENE3D2.10.109.10coord: 59..189
e-value: 1.7E-23
score: 84.9
NoneNo IPR availablePANTHERPTHR43390FAMILY NOT NAMEDcoord: 11..184
IPR000223Peptidase S26A, signal peptidase IPRINTSPR00727LEADERPTASEcoord: 141..160
score: 49.76
coord: 72..84
score: 47.44
IPR000223Peptidase S26A, signal peptidase ITIGRFAMTIGR02227TIGR02227coord: 11..181
e-value: 4.1E-20
score: 70.2
IPR019533Peptidase S26PFAMPF10502Peptidase_S26coord: 61..175
e-value: 1.8E-7
score: 31.0
IPR019758Peptidase S26A, signal peptidase I, conserved sitePROSITEPS00761SPASE_I_3coord: 146..159
IPR036286LexA/Signal peptidase-like superfamilySUPERFAMILY51306LexA/Signal peptidasecoord: 10..187

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6440contigH-elongata_contig6440:2824..3895 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6440.14027.1mRNA_H-elongata_contig6440.14027.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6440 2824..4167 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6440.14027.1 ID=prot_H-elongata_contig6440.14027.1|Name=mRNA_H-elongata_contig6440.14027.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=203bp
LGRLPGRRLDLRRNDVVVFRPPAASRILFAELSAGIDDRLVGGNSRSSLR
VKQTWIRWRQHQRITLHKSLDFTKRVVALSGDQVAVTKGLLYINGQATDI
FAGNLSAQRSPRRIKNLRCFKGNNEHQHYSEASYSLTATVVPKDHVWVLG
DHRDVSFDSHVWGPLPIQNVIGCIRGRYWPVHRAAWFQRDSASSVQARAD
CK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000223Pept_S26A_signal_pept_1
IPR019533Peptidase_S26
IPR019758Pept_S26A_signal_pept_1_CS
IPR036286LexA/Signal_pep-like_sf