prot_H-elongata_contig64359.14023.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig64359.14023.1
Unique Nameprot_H-elongata_contig64359.14023.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length226
Homology
BLAST of mRNA_H-elongata_contig64359.14023.1 vs. uniprot
Match: D8LLA6_ECTSI (Phenylalanine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLA6_ECTSI)

HSP 1 Score: 338 bits (868), Expect = 6.820e-112
Identity = 172/227 (75.77%), Postives = 188/227 (82.82%), Query Frame = 0
Query:    1 MRVLECVPGGTEGISKNKLEGALGADLVKIGLGQCMKNRWVSKGEGGSIVRGDNPG-GSIPDTVRELLRKVAAGEALSEQQTKDLKRRKLITQVTRKSFMVTRGPSYAARRVRRQAELTKEMLATESWKDSSFKEYNFKALGVPCGGGNLHPLLKARGGITSRGGLGLPFVRAEFRKILMFMGFEEMPTNRWVESSFWNFDSLFQPQSHPARDAHDTFFIKDPESAL 226
            MRVLECVP G++GISK  LE ALGAD+VKIGLGQCMKN+WV+KGEGG +VRG N G G++ D  +ELL+KV  GE L +QQ KDLKRRKL+TQVTRKSF VTRG SYA RRV+RQAELTKEMLA+ SWKD++FKEYNFK LG PCGGGNLHPLLK               VR EFRKILMFMGFEEMPTNRWVESSFWNFDSLFQPQSHPARDAHDTFFIKDP SAL
Sbjct:   82 MRVLECVPVGSDGISKAGLEAALGADVVKIGLGQCMKNKWVAKGEGGVLVRGANGGDGAVEDAAKELLKKVEGGETLGDQQAKDLKRRKLVTQVTRKSFKVTRGGSYAVRRVKRQAELTKEMLASGSWKDAAFKEYNFKTLGAPCGGGNLHPLLK---------------VRTEFRKILMFMGFEEMPTNRWVESSFWNFDSLFQPQSHPARDAHDTFFIKDPASAL 293          
BLAST of mRNA_H-elongata_contig64359.14023.1 vs. uniprot
Match: A0A835YKG3_9STRA (Phenylalanine--tRNA ligase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKG3_9STRA)

HSP 1 Score: 251 bits (641), Expect = 8.890e-78
Identity = 133/229 (58.08%), Postives = 161/229 (70.31%), Query Frame = 0
Query:    2 RVLECVPGGTEGISKNKLEGALGADLVKIGLGQCMKNRWVSKGEGGSIVRGDNPGGSIPDTVRELLRKV-AAG---EALSEQQTKDLKRRKLITQVTRKSFMVTRGPSYAARRVRRQAELTKEMLATESWKDSSFKEYNFKALGVPCGGGNLHPLLKARGGITSRGGLGLPFVRAEFRKILMFMGFEEMPTNRWVESSFWNFDSLFQPQSHPARDAHDTFFIKDPESAL 226
            +V + VP G  GISK  LE  LGA LVKIG+G CMK  W+ KG  G++V+G +    + DT ++ LR + AAG   E+LS +  K+LKRRK++TQ+ RKSF VTRG  YA  R ++ A+LT+EML +  WK +SFKEYNF  LG P GGG LHPLLK               VRAEFR +LM MGFEEMPTNRWVESSFWNFD+LFQPQSHPARDAHDTFF+KDP  A+
Sbjct:   81 QVWKAVPAGDAGISKADLEAQLGAPLVKIGMGACMKVGWLKKGPQGALVKGSD---DVRDTTQDKLRALEAAGGALESLSAEDAKELKRRKMVTQIMRKSFKVTRGAQYALERKKKTADLTREMLESGEWKTTSFKEYNFNTLGAPTGGGYLHPLLK---------------VRAEFRNVLMQMGFEEMPTNRWVESSFWNFDALFQPQSHPARDAHDTFFVKDPAQAV 291          
BLAST of mRNA_H-elongata_contig64359.14023.1 vs. uniprot
Match: B8C1R3_THAPS (Phenylalanine--tRNA ligase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1R3_THAPS)

HSP 1 Score: 228 bits (580), Expect = 1.210e-68
Identity = 120/224 (53.57%), Postives = 149/224 (66.52%), Query Frame = 0
Query:    7 VPGGTEGISKNKLEGALGADLVKIGLGQCMKNRWVSKGEGGSIVRGDNPGGSIPDTVRELLRKVAAG----EALSEQQTKDLKRRKLITQVTRKSFMVTRGPSYAARRVRRQAELTKEMLATESWKDSSFKEYNFKALGVPCGGGNLHPLLKARGGITSRGGLGLPFVRAEFRKILMFMGFEEMPTNRWVESSFWNFDSLFQPQSHPARDAHDTFFIKDPESAL 226
            +  G +G+S   L+  +G D+ KIG+G C+KN+W  K + G +V        + D V+ LL K+  G    + L ++    LKRRKLIT VTRKS+ + RGPSYA +RV++ A+LTKE+L +  WKD+ FKEYNF  LG   GGG LHPLLK               VRAEFRKILM MGF EMPTN+WVESSFWNFDSLFQPQSHPARDAHDTFFIK+P   +
Sbjct:   83 IAAGEDGLSMTDLQNGVGKDVCKIGMGNCLKNKWARKEKDGRLVAQVE---GVEDEVKVLLGKLKEGGGGADVLDDKAIAILKRRKLITLVTRKSYTIIRGPSYAPQRVKKAADLTKELLDSGKWKDTPFKEYNFATLGESVGGGYLHPLLK---------------VRAEFRKILMEMGFHEMPTNKWVESSFWNFDSLFQPQSHPARDAHDTFFIKEPAQTV 288          
BLAST of mRNA_H-elongata_contig64359.14023.1 vs. uniprot
Match: A0A7S1UU01_9STRA (Phenylalanine--tRNA ligase (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UU01_9STRA)

HSP 1 Score: 220 bits (561), Expect = 3.640e-66
Identity = 115/216 (53.24%), Postives = 148/216 (68.52%), Query Frame = 0
Query:   14 ISKNKLEGALGADLVKIGLGQCMKNRWVSKGEGGSIV---RGDNPGGSIPDTVRELLRKVAAGEALSEQQTKDLKRRKLITQVTRKSFMVTRGPSYAARRVRRQAELTKEMLATESWKDSSFKEYNFKALGVPCGGGNLHPLLKARGGITSRGGLGLPFVRAEFRKILMFMGFEEMPTNRWVESSFWNFDSLFQPQSHPARDAHDTFFIKDPESAL 226
            +S   L+  +G D+ KIG+G CMK++W+ K +GG +V     D+   S+  ++++L+    + + L E+    LKRRKL++  TRKS  VT+G SYA +RV++ A+LTKEML + SWK ++FK YNF ALG   GGG LHPLLK               VRAEFRKILM MGF EMPTN+WVESSFWNFDSLFQPQSHPARDAHDTFFIK+P   +
Sbjct:   70 LSMPDLQAKVGKDVAKIGMGNCMKSKWIKK-DGGDLVPLKTMDDVTDSVQQSLKKLIESEGSVDTLDEKTLASLKRRKLVSLATRKSLKVTKGSSYAPKRVKKAADLTKEMLESGSWKTTTFKPYNFAALGEKVGGGYLHPLLK---------------VRAEFRKILMEMGFHEMPTNKWVESSFWNFDSLFQPQSHPARDAHDTFFIKEPAETV 269          
BLAST of mRNA_H-elongata_contig64359.14023.1 vs. uniprot
Match: A0A7S4ERJ0_9STRA (Phenylalanine--tRNA ligase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ERJ0_9STRA)

HSP 1 Score: 218 bits (556), Expect = 4.380e-65
Identity = 118/215 (54.88%), Postives = 151/215 (70.23%), Query Frame = 0
Query:   14 ISKNKLEGALGADLVKIGLGQCMKNRWVSKGEGGSIV--RGDNPGGSIPDTVRELLRKVAAGEALSEQQTKDLKRRKLITQVTRKSFMVTRGPSYAARRVRRQAELTKEMLATESWKDSSFKEYNFKALGVPCGGGNLHPLLKARGGITSRGGLGLPFVRAEFRKILMFMGFEEMPTNRWVESSFWNFDSLFQPQSHPARDAHDTFFIKDPESAL 226
            +S   L+  +G D+ KIG+G CMK++W+ K +GG +V  + D+    I D+V++LL  +   +A+ ++  KDLKRRKLI+ VT KS  VTRGP YA +RV++ A+LTKEML + SW+ + +K YNF  LG   GGG LHPLLK               VRAEFRKILM MGF+EMPTN+WVESSFWNFDSLFQPQSHPARDAHDTFFIK+P   +
Sbjct:   91 LSMGDLQAKVGKDVAKIGMGNCMKSKWIKK-DGGDLVALKKDD---EIEDSVQKLLLDL---KAIDDKIAKDLKRRKLISLVTLKSHKVTRGPQYAPKRVKKAADLTKEMLDSGSWETTEYKPYNFLVLGEKVGGGYLHPLLK---------------VRAEFRKILMEMGFQEMPTNKWVESSFWNFDSLFQPQSHPARDAHDTFFIKNPAETV 283          
BLAST of mRNA_H-elongata_contig64359.14023.1 vs. uniprot
Match: A0A448YUG9_9STRA (Phenylalanine--tRNA ligase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YUG9_9STRA)

HSP 1 Score: 225 bits (573), Expect = 8.450e-65
Identity = 121/215 (56.28%), Postives = 152/215 (70.70%), Query Frame = 0
Query:   14 ISKNKLEGALGADLVKIGLGQCMKNRWVSKGEGGSIV--RGDNPGGSIPDTVRELLRKVAAGEALSEQQTKDLKRRKLITQVTRKSFMVTRGPSYAARRVRRQAELTKEMLATESWKDSSFKEYNFKALGVPCGGGNLHPLLKARGGITSRGGLGLPFVRAEFRKILMFMGFEEMPTNRWVESSFWNFDSLFQPQSHPARDAHDTFFIKDPESAL 226
            +S   L+  +G D+ KIG+G CMK++W+ K EGG +V  + D+    + DTV++LL  +   +A+ ++  KDLKRRKLIT VT+KS  VTRGP YA +RV++ A+LTKEML + SW+ + FK YNF  LG   GGG LHPLLK               VRAEFRKILM MGF+EMPTN+WVESSFWNFDSLFQPQSHPARDAHDTFFIK+P   +
Sbjct:   91 LSMGDLQAKVGKDVAKIGMGNCMKSKWIKK-EGGDLVALKKDD---EVEDTVQKLLLDL---KAIDDKTAKDLKRRKLITLVTQKSHKVTRGPQYAPQRVKKAADLTKEMLDSGSWETTEFKPYNFLVLGEKVGGGYLHPLLK---------------VRAEFRKILMEMGFQEMPTNKWVESSFWNFDSLFQPQSHPARDAHDTFFIKNPAETV 283          
BLAST of mRNA_H-elongata_contig64359.14023.1 vs. uniprot
Match: A0A6A4YUU2_9STRA (Phenylalanine--tRNA ligase n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6A4YUU2_9STRA)

HSP 1 Score: 215 bits (548), Expect = 3.220e-64
Identity = 113/230 (49.13%), Postives = 152/230 (66.09%), Query Frame = 0
Query:    1 MRVLECVPGGTEGISKNKLEGALGADLVKIGLGQCMKNRWVSKGEGGSIVRGDNPGGSIPDTVRELLRKVAAGEA----LSEQQTKDLKRRKLITQVTRKSFMVTRGPSYAARRVRRQAELTKEMLATESWKDSSFKEYNFKALGVPCGGGNLHPLLKARGGITSRGGLGLPFVRAEFRKILMFMGFEEMPTNRWVESSFWNFDSLFQPQSHPARDAHDTFFIKDPESAL 226
            +++   +P  T+G  K  LEGA+GA L K+  G CMKN+W+   +   ++  +    S+ DT  E L++VAA +     +S+  +KDLKRRKLI+   RKSF + +GP++A +R R+ A L K+ML +E WK   FK YNF  +G+  GGG+LHPL+K               VRAEFR++LM MGF+EMPTNRWVESSFWNFD+LFQPQSHPARDAHDTFF+  P  A+
Sbjct:   82 VQLFHAIPA-TDGADKATLEGAVGAALFKVAQGACMKNKWIRMDKATGLIYRNVA--SVEDTATEQLKQVAAVQGNVDHVSDNVSKDLKRRKLISLQVRKSFRIGKGPNFAVQRKRQAAGLNKDMLDSEEWKTEKFKPYNFNTMGLAVGGGHLHPLMK---------------VRAEFRRVLMDMGFDEMPTNRWVESSFWNFDALFQPQSHPARDAHDTFFLTTPAKAV 293          
BLAST of mRNA_H-elongata_contig64359.14023.1 vs. uniprot
Match: A0A7S0SRK0_9STRA (Phenylalanine--tRNA ligase n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SRK0_9STRA)

HSP 1 Score: 215 bits (548), Expect = 6.160e-64
Identity = 114/217 (52.53%), Postives = 145/217 (66.82%), Query Frame = 0
Query:   13 GISKNKLEGALGADLVKIGLGQCMKNRWVSKGEGGSIVRGDNPGGSIPDTVRELLRKVAAGEALSEQQTKDLKRRKLITQVTRKSFMVTRGPSYAARRVRRQAELTKEMLATES-------WKDSSFKEYNFKALGVPCGGGNLHPLLKARGGITSRGGLGLPFVRAEFRKILMFMGFEEMPTNRWVESSFWNFDSLFQPQSHPARDAHDTFFIKDP 222
            GI+ N+L+ +L  ++VKIGLG CMKN+W+ K +G  I+R       I D  R+L+  + A + LSE   K+LK RKLI Q+T+K F + +G  +   RVR+ A+LTK+M+  ++       W D SFK  N K++G P  GGN HPLLK               VRAEFR+ILM MGFEEMPTN+WVESSFWNFD+LFQPQSHPARDAHDTFFIKDP
Sbjct:   88 GITLNQLQSSLNDEIVKIGLGPCMKNKWIKK-QGDLIIRVSTA--IINDDTRDLVNSILANQTLSEDNYKNLKNRKLIRQITKKYFRIIKGNDFREVRVRKLADLTKDMIGNKTEMAAGSHWSDLSFKSVNLKSMGAPVQGGNYHPLLK---------------VRAEFRRILMEMGFEEMPTNKWVESSFWNFDALFQPQSHPARDAHDTFFIKDP 286          
BLAST of mRNA_H-elongata_contig64359.14023.1 vs. uniprot
Match: A0A7S4J9R1_9STRA (Phenylalanine--tRNA ligase n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J9R1_9STRA)

HSP 1 Score: 215 bits (547), Expect = 9.490e-64
Identity = 118/223 (52.91%), Postives = 147/223 (65.92%), Query Frame = 0
Query:    7 VPGGTEGISKNKLEGALGADLVKIGLGQCMKNRWVSKGEGGSIV---RGDNPGGSIPDTVRELLRKVAAGEALSEQQTKDLKRRKLITQVTRKSFMVTRGPSYAARRVRRQAELTKEMLATESWKDSSFKEYNFKALGVPCGGGNLHPLLKARGGITSRGGLGLPFVRAEFRKILMFMGFEEMPTNRWVESSFWNFDSLFQPQSHPARDAHDTFFIKDPESAL 226
            +  G  G+S   L+G +G  L KIG+G CMKN+W  K +GG++V   + D        +++ L       +AL  +    LK+RKL+T VT++S+ VTRG SYA  RV++ ++LTKEML T +WK + FK YNF ALG   GGG LHPLLK               VRAEFRKILM MGF EMPT++WVESSFWNFDSLFQPQSHPARDAHDTFFIK+P S L
Sbjct:   85 IEAGEGGMSVGDLQGKVGKALCKIGMGNCMKNKWAKK-DGGNLVAIKKLDEVTDETQASLKALSDAQGNPDALGNKVVNALKKRKLVTLVTKRSYKVTRGASYAPVRVKKASDLTKEMLDTGAWKTTPFKPYNFLALGENVGGGYLHPLLK---------------VRAEFRKILMEMGFHEMPTDKWVESSFWNFDSLFQPQSHPARDAHDTFFIKEPASTL 291          
BLAST of mRNA_H-elongata_contig64359.14023.1 vs. uniprot
Match: A0A7S1GIU5_CYCTE (Phenylalanine--tRNA ligase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GIU5_CYCTE)

HSP 1 Score: 216 bits (550), Expect = 1.510e-63
Identity = 116/230 (50.43%), Postives = 156/230 (67.83%), Query Frame = 0
Query:    1 MRVLECVPGGTEGISKNKLEGALGADLVKIGLGQCMKNRWVSKGEGGSIVRGDNPGGSIPDTVRELLRKVAAGE----ALSEQQTKDLKRRKLITQVTRKSFMVTRGPSYAARRVRRQAELTKEMLATESWKDSSFKEYNFKALGVPCGGGNLHPLLKARGGITSRGGLGLPFVRAEFRKILMFMGFEEMPTNRWVESSFWNFDSLFQPQSHPARDAHDTFFIKDPESAL 226
            ++ +E   GG+  +S  +L+ A+G ++ KIG+G CMK +W+ K +GG++V   +    + D+V+E L+ V A      A+++     LKRRKL++  TRKS  +++GP+YA  RV++ A+LTKEML + +WK + FK YNF  LG   GGG LHPLLK               VRAEFRKILM MGF+EMPTN+WVESSFWNFDSLFQPQSHPARDAHDTFFIK+P   +
Sbjct:  155 LKAIEKAEGGS--LSMPELQTAVGKNIAKIGMGNCMKQKWIKK-DGGNLVSVVSSN-DVQDSVQEGLQAVQAASGNVSAVNDTVIAGLKRRKLVSLATRKSLKISKGPNYALTRVKKAADLTKEMLESGAWKTTPFKSYNFLTLGEKVGGGYLHPLLK---------------VRAEFRKILMQMGFQEMPTNKWVESSFWNFDSLFQPQSHPARDAHDTFFIKEPRETI 365          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig64359.14023.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLA6_ECTSI6.820e-11275.77Phenylalanine--tRNA ligase n=2 Tax=Ectocarpus TaxI... [more]
A0A835YKG3_9STRA8.890e-7858.08Phenylalanine--tRNA ligase n=2 Tax=Tribonema minus... [more]
B8C1R3_THAPS1.210e-6853.57Phenylalanine--tRNA ligase n=1 Tax=Thalassiosira p... [more]
A0A7S1UU01_9STRA3.640e-6653.24Phenylalanine--tRNA ligase (Fragment) n=1 Tax=Gram... [more]
A0A7S4ERJ0_9STRA4.380e-6554.88Phenylalanine--tRNA ligase n=1 Tax=Pseudo-nitzschi... [more]
A0A448YUG9_9STRA8.450e-6556.28Phenylalanine--tRNA ligase n=1 Tax=Pseudo-nitzschi... [more]
A0A6A4YUU2_9STRA3.220e-6449.13Phenylalanine--tRNA ligase n=2 Tax=Aphanomyces Tax... [more]
A0A7S0SRK0_9STRA6.160e-6452.53Phenylalanine--tRNA ligase n=1 Tax=Chromulina nebu... [more]
A0A7S4J9R1_9STRA9.490e-6452.91Phenylalanine--tRNA ligase n=2 Tax=Odontella aurit... [more]
A0A7S1GIU5_CYCTE1.510e-6350.43Phenylalanine--tRNA ligase n=1 Tax=Cyclophora tenu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.2310coord: 64..133
e-value: 4.3E-13
score: 51.3
NoneNo IPR availableGENE3D3.30.930.10coord: 167..226
e-value: 2.9E-19
score: 71.3
NoneNo IPR availablePANTHERPTHR11538PHENYLALANYL-TRNA SYNTHETASEcoord: 16..222
NoneNo IPR availablePANTHERPTHR11538:SF40PHENYLALANINE--TRNA LIGASE ALPHA SUBUNITcoord: 16..222
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 169..221
IPR040725PheRS, DNA binding domain 3PFAMPF18553PheRS_DBD3coord: 2..51
e-value: 3.9E-10
score: 39.9
IPR002319Phenylalanyl-tRNA synthetasePFAMPF01409tRNA-synt_2dcoord: 170..224
e-value: 8.3E-15
score: 54.9
IPR040586PheRS DNA binding domain 2PFAMPF18554PheRS_DBD2coord: 61..91
e-value: 5.6E-6
score: 26.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig64359contigH-elongata_contig64359:92..3210 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig64359.14023.1mRNA_H-elongata_contig64359.14023.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig64359 92..3237 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig64359.14023.1 ID=prot_H-elongata_contig64359.14023.1|Name=mRNA_H-elongata_contig64359.14023.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=226bp
MRVLECVPGGTEGISKNKLEGALGADLVKIGLGQCMKNRWVSKGEGGSIV
RGDNPGGSIPDTVRELLRKVAAGEALSEQQTKDLKRRKLITQVTRKSFMV
TRGPSYAARRVRRQAELTKEMLATESWKDSSFKEYNFKALGVPCGGGNLH
PLLKARGGITSRGGLGLPFVRAEFRKILMFMGFEEMPTNRWVESSFWNFD
SLFQPQSHPARDAHDTFFIKDPESAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040725PheRS_DBD3
IPR002319Phenylalanyl-tRNA_Synthase
IPR040586PheRS_DBD2