prot_H-elongata_contig64164.14003.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig64164.14003.1
Unique Nameprot_H-elongata_contig64164.14003.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length37
Homology
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BLAST of mRNA_H-elongata_contig64164.14003.1 vs. uniprot
Match: A0A6H5K075_9PHAE (DUF4470 domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K075_9PHAE)

HSP 1 Score: 48.1 bits (113), Expect = 2.700e-5
Identity = 21/23 (91.30%), Postives = 22/23 (95.65%), Query Frame = 0 
Query:   15 DAQCADMLLLGCSDARHALFTLW 37
            DA+ ADMLLLGCSDARHALFTLW
Sbjct:    2 DARRADMLLLGCSDARHALFTLW 24
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig64164.14003.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K075_9PHAE2.700e-591.30DUF4470 domain-containing protein (Fragment) n=2 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027974Domain of unknown function DUF4470PFAMPF14737DUF4470coord: 1..37
e-value: 3.1E-6
score: 27.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig64164contigH-elongata_contig64164:369..479 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig64164.14003.1mRNA_H-elongata_contig64164.14003.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig64164 369..479 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig64164.14003.1 ID=prot_H-elongata_contig64164.14003.1|Name=mRNA_H-elongata_contig64164.14003.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=37bp
GCTPPENLLESVRKDAQCADMLLLGCSDARHALFTLW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027974DUF4470