prot_H-elongata_contig64101.13999.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig64101.13999.1
Unique Nameprot_H-elongata_contig64101.13999.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length195
Homology
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BLAST of mRNA_H-elongata_contig64101.13999.1 vs. uniprot
Match: A0A6H5L183_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L183_9PHAE)

HSP 1 Score: 164 bits (416), Expect = 8.070e-46
Identity = 89/198 (44.95%), Postives = 113/198 (57.07%), Query Frame = 0 
Query:    5 GEPKSGTTWTERIITELALHLCGSESNKWCLMGGLAVFPRKPDPAYIWEMLYADTG----ELFLHFDGRIKHSIPGFR--VEKQCVPKGNYHPRGFARKYPCDERDEPSREQLLGCLPLETSQCASLYPSRYPDVRRMAVVFRDPRDVVISSHRYRTETVVVAKQRVEHDLLEFIDHYFEVGADQLSP-YVFHPRDLI 195
            GEPKSGTTW  R++  LA+ LCGSE+N WC +GG+ VFP  P P+Y +E+L   T      LFLHF GRIKH IPG    +  +C   G  H  GF    PCD  + P+RE+L  CL   T +C +   S  P VRR  V+FRDPRDVVIS ++ RT+            L EF+   FEV    L   Y++H  DL+
Sbjct:  117 GEPKSGTTWLGRMVPSLAIELCGSENNPWCQLGGVEVFPHPPAPSYEFELLNISTPTGRPRLFLHFQGRIKHIIPGMDLGIPLKCRNGGRLHKEGFMDLQPCDSGESPTRERLESCLWNTTKRCVNYMTSTDPAVRRSIVLFRDPRDVVISEYKMRTQVFHRDPWIASLSLEEFVQFKFEVLVSWLHQRYMWHTGDLM 314
[Close]
BLAST of mRNA_H-elongata_contig64101.13999.1 vs. uniprot
Match: A0A6H5JLX3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JLX3_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 3.910e-28
Identity = 66/147 (44.90%), Postives = 83/147 (56.46%), Query Frame = 0 
Query:   18 ITELALHLCGSESNKWCLMGGLAVFPRKPDPAYIWEMLYADTGE-----LFLHFDGRIKHSIPGFRVE---KQCVPKGNYHPRGFARKYPCDERDEPSREQLLGCLPLETSQCASLYPSRYPDVRRMAVVFRDPRDVVISSHRYRTE 156
            + +LAL LCGS +N WC MGGLAV+P +P P Y +E+L   TGE     LFLH+ G  KH IPG   +   + C   G  H   F    PC      +REQL GCL   +S+C    PS   + RR AV+ RDPRDVV+S  R R +
Sbjct:    1 MPQLALELCGSSTNTWCEMGGLAVYPSEPSPWYEFELLKRGTGEGSGPTLFLHYKGSNKHVIPGMSWKGHPEGCNQGGRRHRNFFEDYPPCISGPASTREQLTGCLWNTSSRCMGFVPS---ESRRTAVMLRDPRDVVLSEFRMRRD 144
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig64101.13999.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L183_9PHAE8.070e-4644.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JLX3_9PHAE3.910e-2844.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 5..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig64101contigH-elongata_contig64101:106..2050 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig64101.13999.1mRNA_H-elongata_contig64101.13999.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig64101 76..2050 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig64101.13999.1 ID=prot_H-elongata_contig64101.13999.1|Name=mRNA_H-elongata_contig64101.13999.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=195bp
MDSTGEPKSGTTWTERIITELALHLCGSESNKWCLMGGLAVFPRKPDPAY
IWEMLYADTGELFLHFDGRIKHSIPGFRVEKQCVPKGNYHPRGFARKYPC
DERDEPSREQLLGCLPLETSQCASLYPSRYPDVRRMAVVFRDPRDVVISS
HRYRTETVVVAKQRVEHDLLEFIDHYFEVGADQLSPYVFHPRDLI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase