prot_H-elongata_contig6407.13996.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig6407.13996.1
Unique Name	prot_H-elongata_contig6407.13996.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	212

Homology

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BLAST of mRNA_H-elongata_contig6407.13996.1 vs. uniprot
Match: A0A6H5JUU8_9PHAE (CULLIN_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUU8_9PHAE)

HSP 1 Score: 362 bits (928), Expect = 7.020e-120
Identity = 174/211 (82.46%), Postives = 193/211 (91.47%), Query Frame = 0

Query:    1 VHSGRKLEWLYHLGHGELVTHCFDKAYRIYSSTFQMGILHQYNDREEVIVSELARGINVANTEIVRHLFPLVKAGLLRLRGRDGSDIRPTSCEDIPAWARARLNFYFSHKRTRVKINIVDHSRQPLKESKPSIETIQDRKMSVQAAICRVMKVRKESAHRDLVVQVQEQLGHLFEVDSSFVKRNIEDLINKDYLHRLEGREPATQGYKYVA 211
            VHSGRKLEWLYHLGHGE+VTHCFDK YRIYSSTFQMG+LHQ+NDR E+ V ELARGINV++TEIVRHLFPL+KAGLLRL G DG+D++PTSC+DIP  ARARLN  FSHKRTRVKINIVDHSRQPLKE+KPS E IQDRKMSVQAAI RVMK+RKE++HRDLVVQVQEQL HLF+VD  FVKRNIEDLINKDYLHRLEG++P  +GYKYVA
Sbjct:  398 VHSGRKLEWLYHLGHGEMVTHCFDKTYRIYSSTFQMGLLHQFNDRTEIAVGELARGINVSDTEIVRHLFPLIKAGLLRLHGADGADLKPTSCDDIPPGARARLNASFSHKRTRVKINIVDHSRQPLKETKPSTEIIQDRKMSVQAAISRVMKIRKEASHRDLVVQVQEQLRHLFDVDPPFVKRNIEDLINKDYLHRLEGKQPGKEGYKYVA 608

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BLAST of mRNA_H-elongata_contig6407.13996.1 vs. uniprot
Match: D7FUY8_ECTSI (Similar to Cullin-1 (CUL-1) isoform 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUY8_ECTSI)

HSP 1 Score: 362 bits (928), Expect = 2.520e-117
Identity = 175/211 (82.94%), Postives = 193/211 (91.47%), Query Frame = 0

Query:    1 VHSGRKLEWLYHLGHGELVTHCFDKAYRIYSSTFQMGILHQYNDREEVIVSELARGINVANTEIVRHLFPLVKAGLLRLRGRDGSDIRPTSCEDIPAWARARLNFYFSHKRTRVKINIVDHSRQPLKESKPSIETIQDRKMSVQAAICRVMKVRKESAHRDLVVQVQEQLGHLFEVDSSFVKRNIEDLINKDYLHRLEGREPATQGYKYVA 211
            VHSGRKLEWLYHLGHGE+VTHCFDK YRIYSSTFQMG+LHQ+ND  E+ VSELARGINV++TEIVRHLFPL+KAGLLRL G DG+D++PTSC+DIP  ARARLN  FSHKRTRVKINIVDHSRQPLKE+KPS E IQDRKMSVQAAI RVMK+RKE++HRDLVVQV+EQL HLF+VD  FVKRNIEDLINKDYLHRLEGREP  +GYKYVA
Sbjct:  626 VHSGRKLEWLYHLGHGEMVTHCFDKTYRIYSSTFQMGLLHQFNDSTEIAVSELARGINVSDTEIVRHLFPLIKAGLLRLHGADGADLKPTSCDDIPPGARARLNASFSHKRTRVKINIVDHSRQPLKEAKPSTEIIQDRKMSVQAAISRVMKIRKEASHRDLVVQVREQLRHLFDVDPPFVKRNIEDLINKDYLHRLEGREPGKEGYKYVA 836

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BLAST of mRNA_H-elongata_contig6407.13996.1 vs. uniprot
Match: A0A835YSZ1_9STRA (Cullin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSZ1_9STRA)

HSP 1 Score: 242 bits (617), Expect = 1.620e-71
Identity = 119/207 (57.49%), Postives = 155/207 (74.88%), Query Frame = 0

Query:    1 VHSGRKLEWLYHLGHGELVTHCFDKAYRIYSSTFQMGILHQYNDREEVIVSELARGINVANTEIVRHLFPLVKAGLLRLRGRDGSDIRPT---SCEDIPAWARARLNFYFSHKRTRVKINIVDHSRQPLKESKPSIETIQDRKMSVQAAICRVMKVRKESAHRDLVVQVQEQLGHLFEVDSSFVKRNIEDLINKDYLHRLEGREPAT 204
            VHS RKLEWLYHLGHGE+   CFDK YR+YSSTFQMG+L+Q+N R+ + VS++A+GI ++ TE+ RHL+PL+KAGLL +R   G D+R     SC+DI       +N  F+ KR+R+KINIVDHSRQP+K   P +E I DRK SVQAA+CR+MK R+E AHRDL  +V+ QL HLF  D  F+K+ IE+LI+KDYL R+EG++  T
Sbjct:  651 VHSRRKLEWLYHLGHGEMSARCFDKPYRVYSSTFQMGVLYQFNARDAIGVSDIAKGIAISETELSRHLYPLIKAGLLVVRDAAGQDVRGAQMQSCDDIIPQHVIAINTAFTSKRSRIKINIVDHSRQPVKGDVPPVELISDRKASVQAAVCRIMKARRELAHRDLCTEVKAQLVHLFVPDVPFIKKCIEELIDKDYLGRVEGKDMYT 857

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BLAST of mRNA_H-elongata_contig6407.13996.1 vs. uniprot
Match: A0A6V1QSV4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QSV4_HETAK)

HSP 1 Score: 134 bits (337), Expect = 1.140e-32
Identity = 79/212 (37.26%), Postives = 118/212 (55.66%), Query Frame = 0

Query:    1 VHSGRKLEWLYHLGHGELVTHCFDKAYRIYSSTFQMGILHQYNDREEVIVSELARGINVANTEIVRHLFPLVKAGLLRLRGRDGSDIRPTSCEDIPAWARARLNFYFSHKRTRVKINIVDHSRQPLKESKPSI--ETIQDRKMSVQAAICRVMKVRKESAHRDLVVQVQEQLGHLFEVDSSFVKRNIEDLINKDYLHRLEGREPATQGYKYV 210
             ++GR L++L+HLGH E+ T C+   Y + +ST+ M +L ++N  + + +  L   + +   E  R LFP++K  LL ++G +     PT  E +      R+N  F  KRTR+K+     +++  ++    I  E I DRKM  QAAI R MK R+   H DL+ +V  Q+  L+  D  FVK+ IEDLI+KDYL R EG      GY YV
Sbjct:  659 TYTGRCLKYLFHLGHAEISTRCYGGRYTLVASTYAMLLLLEFNHSDALSLGALCATLQMEPKETARQLFPMLKLKLLSVQGLEN----PTDHEALKDSDVIRVNPRFHSKRTRIKLPSPPENKKVAQQQNLEIREELIADRKMVTQAAIVRTMKARRAMGHNDLLAEVTRQVAKLYTADVKFVKQQIEDLIDKDYLERREG---GGDGYAYV 863

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BLAST of mRNA_H-elongata_contig6407.13996.1 vs. uniprot
Match: A0A0S7I659_9TELE (CUL1 (Fragment) n=3 Tax=Euteleostomi TaxID=117571 RepID=A0A0S7I659_9TELE)

HSP 1 Score: 124 bits (310), Expect = 2.940e-31
Identity = 76/214 (35.51%), Postives = 116/214 (54.21%), Query Frame = 0

Query:    2 HSGRKLEWLYHLGHGELVTHCFDKAYRIYSSTFQMGILHQYNDREEVIVSELARGINVANTEIVRHLFPLVKAGLLRLRGRDGS----DIRPTSCEDIPAWARARLNFYFSHKRTRVKINIVDHSRQPLKESKPSIETIQDRKMSVQAAICRVMKVRKESAHRDLVVQVQEQLGHLFEVDSSFVKRNIEDLINKDYLHRLEGREPATQGYKYVA 211
            HSGRKL WLYHL  GELVT+CF   Y + +STFQM IL QYN  +   V +L     +    +V+ L  L+K+ LL L   + +    + +P +          +L   + +K+ RV IN+   + Q  ++        +DRK+ +QAAI R+MK+RK   H+ L+ +V  QL   F+     +K+ I+ LI K+YL R++G +     Y Y+A
Sbjct:   55 HSGRKLTWLYHLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDSYTVQQLTDSTQIKTDILVQVLQILLKSKLLVLEDENANVDEVEFKPDTV--------IKLFLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDT---YSYLA 257

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BLAST of mRNA_H-elongata_contig6407.13996.1 vs. uniprot
Match: A0A1A9ZY34_GLOPL (CULLIN_2 domain-containing protein n=1 Tax=Glossina pallidipes TaxID=7398 RepID=A0A1A9ZY34_GLOPL)

HSP 1 Score: 124 bits (310), Expect = 3.640e-31
Identity = 81/216 (37.50%), Postives = 121/216 (56.02%), Query Frame = 0

Query:    2 HSGRKLEWLYHLGHGELVTHCFDKAYRIYSSTFQMGILHQYNDREEVIVSELARGINVANTEIVRHLFPLVKAGLLRLRGRDGSDIRPTSCEDIPAWARARLNFYFSHKRTRVKINIVDHSRQPLK-ESKPSIETI-----QDRKMSVQAAICRVMKVRKESAHRDLVVQVQEQLGHLFEVDSSFVKRNIEDLINKDYLHRLEGREPATQGYKYVA 211
            HSGRKL WLYH+  GELVT+CF   Y + +STFQM +L Q+ND+    V++L     +    +V+ L  L+K  LL     D S + P S  ++          Y  +K  +++INI     QPLK E K   E +     +DRK+ +QAAI R+MK+R++  H  L+ +V  QL   F+     +K+ I+ LI+K+YL R+EG++     Y Y+A
Sbjct:   69 HSGRKLNWLYHMCKGELVTNCFRNKYTLQASTFQMAVLLQFNDQIRYTVTQLLENTQIQLENLVQVLQILLKDKLLTCIDDDNS-LTPNSVMEL----------YVEYKSKKLRINI----NQPLKTELKVEQEAVHKHIEEDRKLLIQAAIVRIMKMRRKLNHAQLITEVLNQLSSRFKPKVPVIKKCIDILIDKEYLERMEGQKDT---YSYLA 266

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BLAST of mRNA_H-elongata_contig6407.13996.1 vs. uniprot
Match: A0A8C8DSE1_9TELE (CULLIN_2 domain-containing protein n=2 Tax=Oryzias sinensis TaxID=183150 RepID=A0A8C8DSE1_9TELE)

HSP 1 Score: 125 bits (313), Expect = 4.600e-31
Identity = 76/214 (35.51%), Postives = 116/214 (54.21%), Query Frame = 0

Query:    2 HSGRKLEWLYHLGHGELVTHCFDKAYRIYSSTFQMGILHQYNDREEVIVSELARGINVANTEIVRHLFPLVKAGLLRLRGRDGS----DIRPTSCEDIPAWARARLNFYFSHKRTRVKINIVDHSRQPLKESKPSIETIQDRKMSVQAAICRVMKVRKESAHRDLVVQVQEQLGHLFEVDSSFVKRNIEDLINKDYLHRLEGREPATQGYKYVA 211
            HSGRKL WLYHL  GELVT+CF   Y + +STFQM IL QYN  +   V +L     +    +++ L  L+K+ LL L   + +    D +P +          +L   + +K+ RV IN+   + Q  ++        +DRK+ +QAAI R+MK+RK   H+ L+ +V  QL   F+     +K+ I+ LI K+YL R++G +     Y Y+A
Sbjct:  122 HSGRKLTWLYHLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDSYTVQQLTDSTQIKTDILIQVLQILLKSKLLVLEDENANVDEVDFKPDTV--------IKLFLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDT---YSYLA 324

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BLAST of mRNA_H-elongata_contig6407.13996.1 vs. uniprot
Match: A0A3N0XV75_ANAGA (Cullin-1 n=1 Tax=Anabarilius grahami TaxID=495550 RepID=A0A3N0XV75_ANAGA)

HSP 1 Score: 125 bits (313), Expect = 1.500e-30
Identity = 78/214 (36.45%), Postives = 115/214 (53.74%), Query Frame = 0

Query:    2 HSGRKLEWLYHLGHGELVTHCFDKAYRIYSSTFQMGILHQYNDREEVIVSELARGINVANTEIVRHLFPLVKAGLLRLRGR----DGSDIRPTSCEDIPAWARARLNFYFSHKRTRVKINIVDHSRQPLKESKPSIETIQDRKMSVQAAICRVMKVRKESAHRDLVVQVQEQLGHLFEVDSSFVKRNIEDLINKDYLHRLEGREPATQGYKYVA 211
            HSGRKL WLYHL  GELVT+CF   Y + +STFQM IL Q+N      V +LA    +    +V+ L  L+K+ LL L       D  D +P +          +L   + +K+ RV IN+   + Q  ++        +DRK+ +QAAI R+MK+RK   H+ L+ +V  QL   F+     +K+ I+ LI K+YL R++G +     Y Y+A
Sbjct:  188 HSGRKLTWLYHLSKGELVTNCFKNRYTLQASTFQMAILLQFNTENSYTVQQLADSTQIKTDILVQVLQILLKSKLLVLEDENANIDEMDFKPDTI--------IKLFLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDT---YSYLA 390

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BLAST of mRNA_H-elongata_contig6407.13996.1 vs. uniprot
Match: UPI0010A403BB (cullin-1 isoform X2 n=1 Tax=Denticeps clupeoides TaxID=299321 RepID=UPI0010A403BB)

HSP 1 Score: 127 bits (319), Expect = 2.780e-30
Identity = 78/210 (37.14%), Postives = 117/210 (55.71%), Query Frame = 0

Query:    2 HSGRKLEWLYHLGHGELVTHCFDKAYRIYSSTFQMGILHQYNDREEVIVSELARGINVANTEIVRHLFPLVKAGLLRLRGRDGSDIRPTSCEDIPAWARARLNFYFSHKRTRVKINIVDHSRQPLKESKPSIETIQDRKMSVQAAICRVMKVRKESAHRDLVVQVQEQLGHLFEVDSSFVKRNIEDLINKDYLHRLEGREPATQGYKYVA 211
            HSGRKL WLYHL  GELVT+CF   Y + +STFQM IL QYN  +   V +L    ++    +V+ L  L+K+ LL L   + +DI      D   +   +L   + +K+ RV IN+   + Q  ++        +DRK+ +QAAI R+MK+RK   H+ L+ +V  QL   F+     +K+ I+ LI K+YL R++G +     Y Y+A
Sbjct:  559 HSGRKLTWLYHLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDSYTVQQLTDSTHIKLDVLVQVLQILLKSKLLVLED-EAADIDEV---DFRPYTLIKLFLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDT---YSYLA 761

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BLAST of mRNA_H-elongata_contig6407.13996.1 vs. uniprot
Match: UPI001E1E129B (cullin-1-like isoform X1 n=3 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E129B)

HSP 1 Score: 127 bits (319), Expect = 2.810e-30
Identity = 77/210 (36.67%), Postives = 120/210 (57.14%), Query Frame = 0

Query:    2 HSGRKLEWLYHLGHGELVTHCFDKAYRIYSSTFQMGILHQYNDREEVIVSELARGINVANTEIVRHLFPLVKAGLLRLRGRDGSDIRPTSCEDIPAWARARLNFYFSHKRTRVKINIVDHSRQPLKESKPSIETIQDRKMSVQAAICRVMKVRKESAHRDLVVQVQEQLGHLFEVDSSFVKRNIEDLINKDYLHRLEGREPATQGYKYVA 211
            HSGRKL WLY +  GE+VT+CF   Y + +STFQM IL QYN  +   VS L     +    +V+ L  L+K+ LL +   D +D++PTS        +  L   + +K+ RV IN+   S   +++        +DRK+ +QAAI R+MK+RK+  H+ L+ +V  QL   F+   + +K+ I+ LI K+YL R++G++     Y Y+A
Sbjct:  577 HSGRKLGWLYQMSKGEIVTNCFKNRYTLQASTFQMAILLQYNTTDSHTVSSLLENTQIKMDTLVQVLQILLKSKLL-ITEDDENDLQPTS--------QLSLFLGYKNKKLRVNINVPMKSEVKVEQEATHKHIEEDRKLLIQAAIVRIMKMRKQLKHQQLLAEVLNQLSSRFKPRVNVIKKCIDILIEKEYLERVDGQKDT---YSYLA 774

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig6407.13996.1 vs. uniprot

BLAST of mRNA_H-elongata_contig6407.13996.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JUU8_9PHAE	7.020e-120	82.46	CULLIN_2 domain-containing protein n=1 Tax=Ectocar...	[more]
D7FUY8_ECTSI	2.520e-117	82.94	Similar to Cullin-1 (CUL-1) isoform 1 n=1 Tax=Ecto...	[more]
A0A835YSZ1_9STRA	1.620e-71	57.49	Cullin n=1 Tax=Tribonema minus TaxID=303371 RepID=...	[more]
A0A6V1QSV4_HETAK	1.140e-32	37.26	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A0S7I659_9TELE	2.940e-31	35.51	CUL1 (Fragment) n=3 Tax=Euteleostomi TaxID=117571 ...	[more]
A0A1A9ZY34_GLOPL	3.640e-31	37.50	CULLIN_2 domain-containing protein n=1 Tax=Glossin...	[more]
A0A8C8DSE1_9TELE	4.600e-31	35.51	CULLIN_2 domain-containing protein n=2 Tax=Oryzias...	[more]
A0A3N0XV75_ANAGA	1.500e-30	36.45	Cullin-1 n=1 Tax=Anabarilius grahami TaxID=495550 ...	[more]
UPI0010A403BB	2.780e-30	37.14	cullin-1 isoform X2 n=1 Tax=Denticeps clupeoides T...	[more]
UPI001E1E129B	2.810e-30	36.67	cullin-1-like isoform X1 n=3 Tax=Mercenaria mercen...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019559	Cullin protein, neddylation domain	SMART	SM00884	Cullin_Nedd8_2	coord: 135..202 e-value: 1.3E-19 score: 81.2
IPR019559	Cullin protein, neddylation domain	PFAM	PF10557	Cullin_Nedd8	coord: 138..198 e-value: 1.5E-19 score: 69.8
IPR001373	Cullin, N-terminal	PFAM	PF00888	Cullin	coord: 2..90 e-value: 4.7E-18 score: 65.2
None	No IPR available	GENE3D	1.10.10.2620		coord: 1..121 e-value: 1.3E-23 score: 85.4
None	No IPR available	PANTHER	PTHR11932	CULLIN	coord: 2..211
None	No IPR available	PANTHER	PTHR11932:SF81	CULLIN-1	coord: 2..211
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 133..211 e-value: 1.1E-21 score: 78.4
IPR016158	Cullin homology domain	PROSITE	PS50069	CULLIN_2	coord: 1..72 score: 14.021
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 128..200
IPR036317	Cullin homology domain superfamily	SUPERFAMILY	75632	Cullin homology domain	coord: 2..119

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig6407	contig	H-elongata_contig6407:240..2704 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig6407.13996.1	mRNA_H-elongata_contig6407.13996.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig6407 240..2704 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig6407.13996.1 ID=prot_H-elongata_contig6407.13996.1|Name=mRNA_H-elongata_contig6407.13996.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=212bp
VHSGRKLEWLYHLGHGELVTHCFDKAYRIYSSTFQMGILHQYNDREEVIV
SELARGINVANTEIVRHLFPLVKAGLLRLRGRDGSDIRPTSCEDIPAWAR
ARLNFYFSHKRTRVKINIVDHSRQPLKESKPSIETIQDRKMSVQAAICRV
MKVRKESAHRDLVVQVQEQLGHLFEVDSSFVKRNIEDLINKDYLHRLEGR
EPATQGYKYVA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019559	Cullin_neddylation_domain
IPR001373	Cullin_N
IPR036388	WH-like_DNA-bd_sf
IPR016158	Cullin_homology
IPR036390	WH_DNA-bd_sf
IPR036317	Cullin_homology_sf