prot_H-elongata_contig640.13986.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig640.13986.1
Unique Nameprot_H-elongata_contig640.13986.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length605
Homology
BLAST of mRNA_H-elongata_contig640.13986.1 vs. uniprot
Match: D8LJU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJU4_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 2.740e-18
Identity = 103/296 (34.80%), Postives = 156/296 (52.70%), Query Frame = 0
Query:  311 PSCRDLMEWDGKRDTLALKEVMISERASERQRNLAKDRAKGQAVIELLTRLEREDRSRSNMVRTRCCILLDAARVLRDRILERDELLQTVEILKSFKSSEGHEGDHLPSRPPPGAHCSRDCEPSIQARSSSVKWDSKGKGVVRKGKXXXXXXAKVHGQRTHGVDFDGERVVFGA---------EGRSSLRGSSVRV--------EQIPSGDSDCDSDNDNARGSXXXXXXXXXXXXXXXXXXQGGVGGEA-GERLGLEMVGAEGVADARSITAHTMVKCWEALGERLAAARKVVRE 588
            PS  ++MEWD +RD L LKE+MI+ER  ER+R L +++AKGQAV++ LT+LERE+R RSN++R +  +L D AR+L +R+ E  EL   ++ +       G   ++        A  +        A + S+  ++K K    +        A  + QRT       +    GA         +G+   +G + R         E   SG  D  ++++  + + XXXXXXXXXXXXXX       G +A GE L   ++G+    D  ++TA +M++CW A+ ERLAAAR VVRE
Sbjct:  281 PSYGEVMEWDARRDALELKEIMIAERTRERRRGLMREQAKGQAVVQYLTKLEREERGRSNLLRAKGLMLADVARMLPERVKEMIELRNKIDKISQGLGGSGTNDNNGXXXXXXKAGTAESSVEGTAAGTGSLAGEAKNKSKASRASEGSTN-ATANTQRTSPSSSGFDMASAGATTPGSSACSDGKDKGKGKARRRNDDNGKGGESAKSGVVDSMAEDEGEQEASXXXXXXXXXXXXXXFAATPSCGDDASGEGL---LLGSN--PDVHALTAQSMLRCWNAVRERLAAARNVVRE 570          
BLAST of mRNA_H-elongata_contig640.13986.1 vs. uniprot
Match: A0A6H5KRP0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRP0_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 1.370e-14
Identity = 46/91 (50.55%), Postives = 67/91 (73.63%), Query Frame = 0
Query:  311 PSCRDLMEWDGKRDTLALKEVMISERASERQRNLAKDRAKGQAVIELLTRLEREDRSRSNMVRTRCCILLDAARVLRDRILERDELLQTVE 401
            PS  +LMEWD +RD L LKE+MI+ER  ER+R L +++AKGQAV++ L +LERE+R RSN++R +  +L D AR+L +R+ E  EL   ++
Sbjct:  576 PSYGELMEWDAQRDALELKEIMIAERTRERRRGLMREQAKGQAVVQYLAKLEREERGRSNLLRAKGLMLADLARMLPERVKEVIELRNKID 666          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig640.13986.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJU4_ECTSI2.740e-1834.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRP0_9PHAE1.370e-1450.55Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig640contigH-elongata_contig640:2441..7419 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig640.13986.1mRNA_H-elongata_contig640.13986.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig640 2441..7420 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig640.13986.1 ID=prot_H-elongata_contig640.13986.1|Name=mRNA_H-elongata_contig640.13986.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=605bp
EAFGDKNQKAPHRTALRRLSRTLLPPGYLSRNRWRGKVDKAATTDTLGSE
SVPPVAEPKGALYVALSSNSSESKSDPRDVMKRWPWLLTEEQILGDIKCM
MENLPKAVLVTSTSKRKKEERGKGNRSDEDAVQDCNPRLTPSEKQWLEIA
REKDKEDQDSVDIVEDVNKAENPTVDASYPNPDPADGVGVSVSDVSSINI
NTKGTSSDEVDKEWHSDGTAAATVAVAVATHVNRATETDLAATNAGSEAE
SSSESSSESSSESREDAGPAAGAGLGLGFEPESGEKESKKADPERGESKD
PGEDKPPLELPSCRDLMEWDGKRDTLALKEVMISERASERQRNLAKDRAK
GQAVIELLTRLEREDRSRSNMVRTRCCILLDAARVLRDRILERDELLQTV
EILKSFKSSEGHEGDHLPSRPPPGAHCSRDCEPSIQARSSSVKWDSKGKG
VVRKGKGKGKARAKVHGQRTHGVDFDGERVVFGAEGRSSLRGSSVRVEQI
PSGDSDCDSDNDNARGSDCDNGRGRDSDNGRGRYDQGGVGGEAGERLGLE
MVGAEGVADARSITAHTMVKCWEALGERLAAARKVVREAGVDTEDVTAAT
TAAIG
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