prot_H-elongata_contig63938.13977.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig63938.13977.1
Unique Nameprot_H-elongata_contig63938.13977.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length117
Homology
BLAST of mRNA_H-elongata_contig63938.13977.1 vs. uniprot
Match: D7FYJ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYJ4_ECTSI)

HSP 1 Score: 171 bits (432), Expect = 6.960e-53
Identity = 88/112 (78.57%), Postives = 102/112 (91.07%), Query Frame = 0
Query:    5 EDQQKINEFGRLNARLLEIREEKAHVKDVLDKLDDATTELMSGEGDSVMLMLGDGFIVCEEEYATEFCERKQEERQSKSDEIAAEEKDILERQAVLKKALYARFGSSIQLEA 116
            EDQQKINEFGRLN RLLEIR++K+H+KD+LDKLDDATTELM+GEGDSVMLMLGD F+ CEEE+AT++CER+QE+RQSK D++  EEK IL RQ VLKK LYARFGSSIQLEA
Sbjct:    9 EDQQKINEFGRLNTRLLEIRDDKSHIKDILDKLDDATTELMTGEGDSVMLMLGDSFMECEEEFATDYCERQQEKRQSKLDDLVDEEKTILLRQGVLKKELYARFGSSIQLEA 120          
BLAST of mRNA_H-elongata_contig63938.13977.1 vs. uniprot
Match: A0A6H5KTT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTT7_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 4.830e-35
Identity = 62/76 (81.58%), Postives = 71/76 (93.42%), Query Frame = 0
Query:    2 VRLEDQQKINEFGRLNARLLEIREEKAHVKDVLDKLDDATTELMSGEGDSVMLMLGDGFIVCEEEYATEFCERKQE 77
            V  EDQQKINEFGRLN RLLEIRE+K+HVKD+LDKLDDATTELM+GEGDSVMLMLGD F+ CEEE+AT++CER+QE
Sbjct:    2 VSYEDQQKINEFGRLNTRLLEIREDKSHVKDILDKLDDATTELMTGEGDSVMLMLGDSFMECEEEFATDYCERQQE 77          
BLAST of mRNA_H-elongata_contig63938.13977.1 vs. uniprot
Match: B5YND4_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YND4_THAPS)

HSP 1 Score: 124 bits (312), Expect = 1.950e-34
Identity = 67/115 (58.26%), Postives = 85/115 (73.91%), Query Frame = 0
Query:    1 QVRLEDQQKINEFGRLNARLLEIREEKAHVKDVLDKLDDATTELMSGEGDSVMLMLGDGFIVCEEEYATEFCERKQEERQSKSDEIAAEEKDILERQAVLKKALYARFGSSIQLE 115
            +VR EDQ KINEFG+LNARL E+R E A +K +L+K+DDA+TELM G GD VML LG+      E+ ATEFCE + E+ Q+  D++  EE DI+E+QA LKK LY RFG+SI LE
Sbjct:   18 EVRREDQDKINEFGQLNARLYEVRSEIARLKKLLEKIDDASTELMMGNGDKVMLRLGEAMFEATEDEATEFCEAEMEKHQAVLDDLDKEEADIVEKQAALKKVLYGRFGNSINLE 132          
BLAST of mRNA_H-elongata_contig63938.13977.1 vs. uniprot
Match: A0A835Z9N6_9STRA (Prefoldin subunit 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9N6_9STRA)

HSP 1 Score: 123 bits (309), Expect = 7.040e-34
Identity = 74/132 (56.06%), Postives = 90/132 (68.18%), Query Frame = 0
Query:    1 QVRLEDQQKINEFGRLNARLLEIREEKAHVKDVLDKLDDATTELMSGEGDSVMLMLGDGFIVCEEEYATEFCERKQ----------------EERQSKSDEIAAEEKDILERQAVLKKALYARFGSSIQLEA 116
            +VR EDQQ+INEFGRLN RL E+R +   +K  LD LDDATTELM+G+G  V L LGD F+V EEE+ATE+CE+KQ                E  Q+K D ++ EE  IL+RQA LKK LYARFG+SI LEA
Sbjct:   11 EVRWEDQQQINEFGRLNTRLNELRGDTKALKGELDNLDDATTELMTGDGGKVNLQLGDAFVVVEEEFATEYCEKKQSIAPAESXXXXXXXXXEGVQAKLDALSREEDSILKRQAELKKILYARFGASINLEA 142          
BLAST of mRNA_H-elongata_contig63938.13977.1 vs. uniprot
Match: A0A7S3YAJ8_HETAK (Prefoldin subunit 4 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAJ8_HETAK)

HSP 1 Score: 122 bits (306), Expect = 1.290e-33
Identity = 67/116 (57.76%), Postives = 83/116 (71.55%), Query Frame = 0
Query:    1 QVRLEDQQKINEFGRLNARLLEIREEKAHVKDVLDKLDDATTELMSGEGDSVMLMLGDGFIVCEEEYATEFCERKQEERQSKSDEIAAEEKDILERQAVLKKALYARFGSSIQLEA 116
            +VR EDQ +INEFG+LN RL EIRE+   +KD  D+LDDA TELM+G+GD V + +G+ FI C EEYATE+CE++QE+ Q   D    EE  ILERQ  LK  LY RFG +I LEA
Sbjct:   12 EVRREDQLQINEFGQLNNRLNEIREDCKALKDKFDRLDDANTELMTGDGDDVKIFMGESFIQCSEEYATEYCEKEQEKLQGMLDTFKEEETAILERQKELKVVLYGRFGDAINLEA 127          
BLAST of mRNA_H-elongata_contig63938.13977.1 vs. uniprot
Match: A0A7S0B128_9STRA (Prefoldin subunit 4 n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0B128_9STRA)

HSP 1 Score: 120 bits (301), Expect = 9.380e-33
Identity = 67/115 (58.26%), Postives = 82/115 (71.30%), Query Frame = 0
Query:    1 QVRLEDQQKINEFGRLNARLLEIREEKAHVKDVLDKLDDATTELMSGEGDSVMLMLGDGFIVCEEEYATEFCERKQEERQSKSDEIAAEEKDILERQAVLKKALYARFGSSIQLE 115
            +VR EDQ+ IN+FGRLNARL E+R E+  +K  L+++DDA+TELM G GD VMLMLGD F    EE ATEFCE + E+ Q+  D +  EE +ILE Q  LKK LY RFG SI LE
Sbjct:   19 EVRREDQENINKFGRLNARLYEVRGERDAIKKKLERIDDASTELMMGSGDKVMLMLGDAFFESSEEDATEFCEAEVEKFQAVVDNLEEEESEILEEQEKLKKILYTRFGKSINLE 133          
BLAST of mRNA_H-elongata_contig63938.13977.1 vs. uniprot
Match: A0A7S2V806_9STRA (Prefoldin subunit 4 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V806_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.120e-32
Identity = 68/114 (59.65%), Postives = 86/114 (75.44%), Query Frame = 0
Query:    2 VRLEDQQKINEFGRLNARLLEIREEKAHVKDVLDKLDDATTELMSGEGDSVMLMLGDGFIVCEEEYATEFCERKQEERQSKSDEIAAEEKDILERQAVLKKALYARFGSSIQLE 115
            VR EDQQKINEFGRLN RL E++ E    K+ LDKLDDA+TELM+ +G  V L+LG+ FI C E+YATE+ +++QE+ Q   D+++ EE  ILERQ  LK+ LYARFGSSI LE
Sbjct:   14 VRWEDQQKINEFGRLNTRLHELQVELKLHKENLDKLDDASTELMTEDGSGVKLLLGEVFIECNEDYATEYLDKEQEKTQVLVDQLSEEEHTILERQKELKEVLYARFGSSINLE 127          
BLAST of mRNA_H-elongata_contig63938.13977.1 vs. uniprot
Match: A0A6U1YJT7_TRICV (Prefoldin subunit 4 n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A6U1YJT7_TRICV)

HSP 1 Score: 116 bits (291), Expect = 2.450e-31
Identity = 64/115 (55.65%), Postives = 79/115 (68.70%), Query Frame = 0
Query:    1 QVRLEDQQKINEFGRLNARLLEIREEKAHVKDVLDKLDDATTELMSGEGDSVMLMLGDGFIVCEEEYATEFCERKQEERQSKSDEIAAEEKDILERQAVLKKALYARFGSSIQLE 115
            +VR  DQ+ IN FGRLNARL E+R  +  +K  L+++DDA+TELM G GDSV+L+LGD F  C EE ATE CE + +  Q   DE+  EE  ILE Q  LK+ LYARFG SI LE
Sbjct:   11 EVRRVDQENINTFGRLNARLYEVRASRDDLKKKLEQIDDASTELMMGSGDSVLLLLGDAFFECTEEEATEHCEAEADRLQGTVDELEEEESAILEEQGTLKRVLYARFGQSINLE 125          
BLAST of mRNA_H-elongata_contig63938.13977.1 vs. uniprot
Match: W7TPN2_9STRA (Prefoldin subunit 4 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPN2_9STRA)

HSP 1 Score: 117 bits (292), Expect = 2.910e-31
Identity = 66/115 (57.39%), Postives = 83/115 (72.17%), Query Frame = 0
Query:    1 QVRLEDQQKINEFGRLNARLLEIREEKAHVKDVLDKLDDATTELMSGEGDSVMLMLGDGFIVCEEEYATEFCERKQEERQSKSDEIAAEEKDILERQAVLKKALYARFGSSIQLE 115
            +VR EDQ+ INEFGRLN + LE+ E+ A++K+ L+KLDDA TELM G G  V L LG+ F+   E+YATE CERKQE+ Q+K +E+  E+  I  RQ  LKK LY RFGSSI LE
Sbjct:   29 EVRKEDQEMINEFGRLNNQYLELDEDLAYLKEQLEKLDDAVTELMVGVGGPVRLSLGEAFMDVSEDYATEHCERKQEQLQAKVEELGREKGKIATRQMELKKVLYGRFGSSINLE 143          
BLAST of mRNA_H-elongata_contig63938.13977.1 vs. uniprot
Match: A0A1E7F096_9STRA (Prefoldin subunit 4 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F096_9STRA)

HSP 1 Score: 114 bits (285), Expect = 2.050e-30
Identity = 66/117 (56.41%), Postives = 84/117 (71.79%), Query Frame = 0
Query:    1 QVRLEDQQKINEFGRLNARLLEIREEKAHVKDVLDKLDDATTELMSG-EGDSVMLMLGDGFIVCEEEYATEFCERKQEERQSKSDEIAAEEKDILERQAVLKKALYARFGSSIQLEA 116
            +VR EDQ  IN+F RLNARL E+R+E+  +K  L++LDDA+TELM G EGD+VML++G+ F    EE ATE+CE + E    + + +  EE  ILERQA LKK LY RFG SIQLEA
Sbjct:   12 EVRREDQDNINKFARLNARLHELRDERKIIKQSLERLDDASTELMMGSEGDNVMLLIGESFFDTSEEDATEYCESEVERMSGELEILDGEESTILERQAELKKLLYGRFGKSIQLEA 128          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63938.13977.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYJ4_ECTSI6.960e-5378.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KTT7_9PHAE4.830e-3581.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B5YND4_THAPS1.950e-3458.26Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
A0A835Z9N6_9STRA7.040e-3456.06Prefoldin subunit 4 n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S3YAJ8_HETAK1.290e-3357.76Prefoldin subunit 4 n=1 Tax=Heterosigma akashiwo T... [more]
A0A7S0B128_9STRA9.380e-3358.26Prefoldin subunit 4 n=1 Tax=Minutocellus polymorph... [more]
A0A7S2V806_9STRA1.120e-3259.65Prefoldin subunit 4 n=1 Tax=Fibrocapsa japonica Ta... [more]
A0A6U1YJT7_TRICV2.450e-3155.65Prefoldin subunit 4 n=1 Tax=Trieres chinensis TaxI... [more]
W7TPN2_9STRA2.910e-3157.39Prefoldin subunit 4 n=2 Tax=Monodopsidaceae TaxID=... [more]
A0A1E7F096_9STRA2.050e-3056.41Prefoldin subunit 4 n=1 Tax=Fragilariopsis cylindr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 23..43
NoneNo IPR availableCOILSCoilCoilcoord: 72..92
IPR002777Prefoldin beta-likePFAMPF01920Prefoldin_2coord: 7..110
e-value: 4.6E-12
score: 45.8
IPR016661Prefoldin, subunit 4PANTHERPTHR21100FAMILY NOT NAMEDcoord: 1..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig63938contigH-elongata_contig63938:967..2688 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig63938.13977.1mRNA_H-elongata_contig63938.13977.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig63938 967..2688 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig63938.13977.1 ID=prot_H-elongata_contig63938.13977.1|Name=mRNA_H-elongata_contig63938.13977.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=117bp
QVRLEDQQKINEFGRLNARLLEIREEKAHVKDVLDKLDDATTELMSGEGD
SVMLMLGDGFIVCEEEYATEFCERKQEERQSKSDEIAAEEKDILERQAVL
KKALYARFGSSIQLEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002777PFD_beta-like
IPR016661PFDN4