prot_H-elongata_contig6392.13976.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6392.13976.1
Unique Nameprot_H-elongata_contig6392.13976.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length224
Homology
BLAST of mRNA_H-elongata_contig6392.13976.1 vs. uniprot
Match: D8LF51_ECTSI (Eukaryotic translation initiation factor 3 k subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF51_ECTSI)

HSP 1 Score: 303 bits (777), Expect = 1.650e-102
Identity = 155/189 (82.01%), Postives = 170/189 (89.95%), Query Frame = 0
Query:   35 VKSGTYDFEANKALLKLYQFFPDLCKSESVALMLAKALMNVPSTDFMALVYIVSPPLHRREPVSSLKRAADSLETAKFVDFWQTCAEGDMPALIEKIPGYKKHIREFIVQTLASTFQSVKRESMEQSLDLDGVELDAFVAANSNVVSESPDRREFKFALNEFNQIQPKKFKESVEFEKILKTIDKLSSF 223
            VKSGTYDFEANKALLKLYQFFPDLC+ E VAL+LAKALMNVPSTDFMAL+YIV P LHR EPV SLKRAADSLETAKFVDFWQTCA+GDMPALIE +PG+KKH+R FIV TLA+TFQ   R++MEQ LDLDG EL +FV AN++VVS SPD  +FKFALNEFNQIQPKKFKESVEF+KILKTIDKLSSF
Sbjct:    7 VKSGTYDFEANKALLKLYQFFPDLCQPEKVALVLAKALMNVPSTDFMALMYIVPPNLHRCEPVHSLKRAADSLETAKFVDFWQTCADGDMPALIESVPGFKKHMRVFIVHTLATTFQDSTRQNMEQCLDLDGAELASFVEANADVVSASPDGSKFKFALNEFNQIQPKKFKESVEFDKILKTIDKLSSF 195          
BLAST of mRNA_H-elongata_contig6392.13976.1 vs. uniprot
Match: A0A835Z1S6_9STRA (Eukaryotic translation initiation factor 3 k subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1S6_9STRA)

HSP 1 Score: 223 bits (568), Expect = 2.540e-70
Identity = 120/221 (54.30%), Postives = 149/221 (67.42%), Query Frame = 0
Query:    1 MEFPASYEGMRPVVEHEYFDHRAVPQLEEYLDEQVKSGTYDFEANKALLKLYQFFPDLCKSESVALMLAKALMNVPSTDFMALVYIVSPPLHRREPVSSLKRAADSLETAKFVDFWQTCAEGDMPALIEKIPGYKKHIREFIVQTLASTFQSVKRESMEQSLDLDGVELDAFVAANSNVVSESPDRREFKFALNEFNQIQPKKFKESVEFEKILKTIDKLS 221
            M+ PA +  MRPVVEHEYFDHR VPQLE YL EQ  SGTYDFEANKALLKLYQFFPDL K++ VAL   KALM +P+ DF AL Y+        EP++SL RA D+LE A++  FW    E +  ALI+++PG+    R   +  LA+TFQSV   ++E+++ L G EL+AFV      V     R    FA NEFNQ+QPK+FKESVEFEK+LK +  LS
Sbjct:    5 MQLPARHAAMRPVVEHEYFDHRVVPQLEAYLAEQASSGTYDFEANKALLKLYQFFPDLVKADMVALAAGKALMALPAPDFAALSYLAPAAALAAEPLTSLARALDALEGARYGAFWAVTREPEAAALIQRLPGFADQARRVALSALAATFQSVPLSALEEAVALSGAELEAFVGGLGGEVKLGDGRA--AFARNEFNQMQPKRFKESVEFEKVLKAVGTLS 223          
BLAST of mRNA_H-elongata_contig6392.13976.1 vs. uniprot
Match: A0A7S2FZN4_9STRA (Eukaryotic translation initiation factor 3 subunit K n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FZN4_9STRA)

HSP 1 Score: 168 bits (425), Expect = 9.800e-49
Identity = 94/222 (42.34%), Postives = 142/222 (63.96%), Query Frame = 0
Query:    1 MEFPASYEGMRPVVEHEYFDHRAVPQLEEYLDEQVKSGTYDFEANKALLKLYQFFPDLCKSESVALMLAKALMNVPSTDFMALVYIVSPPLHRREPVSSLKRAADSLETAKFVDFWQTCAEGDMPALIEKIPGYKKHIREFIVQTLASTFQSVKRESMEQSLDLDGVELDAFVAANSNVVSESPDRREFKFALNEFNQIQPKKFKESVEFEKILKTIDKLSS 222
            M  PASYE +  +++ + F+  ++ +L+ YLDEQ+ + TYDF ANKALLKLY F+PD    + +AL L KALM +PSTD M L+Y+V      +EPV++L R A  LETAKFV+FW+    G    L++ + G+ + IR +++  L+ TFQ V+ E+    L LD  +L+ +V+AN +    S + +   F  N  NQ +PKKFKE++ F+++L  ID L+S
Sbjct:    1 MALPASYEEIATLLDEQAFEKSSIEKLQAYLDEQIATETYDFVANKALLKLYSFYPDQASDQYIALALTKALMALPSTDMMLLLYLVPESAQTKEPVATLVRCAVHLETAKFVEFWEVANLGGNE-LLDAVSGFDEAIRSYMIGVLSITFQKVESETFADLLALDEGDLEEYVSANQSD-KLSIEGKNVVFTPNSENQQRPKKFKENISFDQMLPLIDFLAS 220          
BLAST of mRNA_H-elongata_contig6392.13976.1 vs. uniprot
Match: A0A7S2H0N4_9STRA (Eukaryotic translation initiation factor 3 subunit K n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H0N4_9STRA)

HSP 1 Score: 149 bits (377), Expect = 1.940e-41
Identity = 85/221 (38.46%), Postives = 134/221 (60.63%), Query Frame = 0
Query:    1 MEFPASYEGMRPVVEHEYFDHRAVPQLEEYLDEQVKSGTYDFEANKALLKLYQFFPDLCKSESVALMLAKALMNVPSTDFMALVYIVSPPLHRREPVSSLKRAADSLETAKFVDFWQTCAEGDMPALIEKIPGYKKHIREFIVQTLASTFQSVKRESMEQSLDLDGVELDAFVAANSNVVSESPDRREFKFALNEFNQIQPKKFKESVEFEKILKTIDKLS 221
            ME P S + +   +  +      +  L+EYL+EQV++ TYDF ANK L+KLYQF+P+      +AL + K++M +PSTD   L+Y+V   L  +EP+ +L R AD LETA+FV+FW+    G    L++ IPG+ + IR F++  L+ TFQ ++ E+    L LD   L+ F+A  ++ +    +++   F  N  NQ +PKKFKE++ F+ +L  I+ LS
Sbjct:    6 MEIPQSAQSIAEKLALDEHSVELIDTLQEYLNEQVQTDTYDFMANKTLMKLYQFYPERSNENCIALAVTKSMMALPSTDLSVLLYLVPETLALKEPIHTLVRCADHLETARFVEFWEVANLGGNE-LLDAIPGFPEAIRSFMIGVLSMTFQKLQSETFLDLLMLDEESLEEFIAEQTDKLCLE-EKKFVIFLPNSENQSRPKKFKENISFDHMLPIINLLS 224          
BLAST of mRNA_H-elongata_contig6392.13976.1 vs. uniprot
Match: W7U338_9STRA (Eukaryotic translation initiation factor 3 subunit K n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U338_9STRA)

HSP 1 Score: 142 bits (357), Expect = 4.790e-38
Identity = 84/220 (38.18%), Postives = 132/220 (60.00%), Query Frame = 0
Query:    4 PASYEGMRP-VVEHEYFDHRAVPQLEEYLDEQVKSGTYDFEANKALLKLYQFFPDLCKSESVALMLAKALMNVPSTDFMALVYIVSPPLHRREPVSSLKRAADSLETAKFVDFWQTCAEGDMPALIEKIPGYKKHIREFIVQTLASTFQSVKRESMEQSLDLDGVELDAFVAANSNVVSESPDRREFKFALNEFNQIQPKKFKESVEFEKILKTIDKLSS 222
            P+SY  +   V+    +    V  LEEYL  QVK G+YDFEANK+LLKLY  +P L  +E+V  +L KAL+N+P+TDF  L+YI+   L   E V ++K AA++LETA++ DFW         A+   IP +K  IR+ I+   A+T+++V +  +   + L G ELD+F+ AN+  +    +     FA N+ NQ   +K+KE V+ + +L  +++L++
Sbjct:   44 PSSYNSVHSNVLGDGLYTQEKVKHLEEYLQLQVKEGSYDFEANKSLLKLYLLYPPLANNENVETILLKALLNLPATDFTLLLYILPEKLQTDENVLTIKDAAEALETARYADFWSIL--NSRAAVFLAIPEWKDDIRKIILTVHAATYKAVDKAHVSDGVGLSGDELDSFLTANTPGLVAKVEVDRVIFAPNKENQPWVRKYKEKVDLQNMLGILNRLAA 261          
BLAST of mRNA_H-elongata_contig6392.13976.1 vs. uniprot
Match: A0A7S2WSD7_9STRA (Eukaryotic translation initiation factor 3 subunit K n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSD7_9STRA)

HSP 1 Score: 139 bits (350), Expect = 2.110e-37
Identity = 82/215 (38.14%), Postives = 123/215 (57.21%), Query Frame = 0
Query:    8 EGMRPVVEHEYFDHRAVPQLEEYLDEQVKSGTYDFEANKALLKLYQFFPDLCKSESVALMLAKALMNVPSTDFMALVYIVSPPLHRREPVSSLKRAADSLETAKFVDFWQTCAEGDMPALIEKIPGYKKHIREFIVQTLASTFQSVKRESMEQSLDLDGVELDAFVAANSNVVSESPDRREFKFALNEFNQIQPKKFKESVEFEKILKTIDKLSS 222
            E +   +    +D  A+  LE Y+ EQV+  TYDF ANKALLKLYQFFP       VAL+L KALM +PSTD   L+Y+V   +  +EP+ +L R  + LET KFV+FW+    G    L++ I G+ + +R++++  L  TFQS++ E     + L    L  +V   S+V+    + ++  F  N  NQ QPK FKE++ F+ +   +  L+S
Sbjct:   12 ESVATALRRNEYDQDAIELLESYVAEQVEQNTYDFVANKALLKLYQFFPARTNEHMVALILTKALMALPSTDMTLLLYLVPDTVRAKEPILTLVRCHEHLETGKFVEFWEVANLGGNE-LLDAIHGFDEAMRQYMISVLCMTFQSLESEVFMDLVALPDEHLAEYVGTKSDVMRL--EGKQVIFVENPQNQPQPKTFKENISFDHLAPVMSLLTS 223          
BLAST of mRNA_H-elongata_contig6392.13976.1 vs. uniprot
Match: A0A7S4ULZ9_GUITH (Eukaryotic translation initiation factor 3 subunit K n=3 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4ULZ9_GUITH)

HSP 1 Score: 127 bits (320), Expect = 4.540e-33
Identity = 70/206 (33.98%), Postives = 120/206 (58.25%), Query Frame = 0
Query:    8 EGMRPVVEHEYFDHRAVPQLEEYLDEQVKSGTYDFEANKALLKLYQFFPDLCKSESVALMLAKALMNVPSTDFMALVYIVSPPLHRREPVSSLKRAADSLETAKFVDFWQTCAEGDMPALIEKIPGYKKHIREFIVQTLASTFQSVKRESMEQSLDLDGVELDAFVAANSNVVSESPDRREFKFALNEFNQIQPKKFKESVEFEKI 213
            E ++ ++    FD    PQLE Y+DEQ+K G  D +AN ALL+ YQ+ P    SE V  +L KALM +P+TDFM  +Y+V P   + + +  LK+ +D LET +F ++W   A+    ++   IPG+ + IR++IV  +++T+Q + R+ +E  ++L G +LD  +     V   S    + +  +NEFN+   K  ++ + F+++
Sbjct:    3 EEVQRLLSERRFDPSITPQLEAYVDEQIKGGYTDLDANLALLRFYQYNPATANSEVVCKILVKALMQMPATDFMLCMYLV-PGAVKEQKIEVLKQLSDKLETCQFKEYWADMADEKNASVANGIPGFHEAIRQYIVGVISATYQVIARDELEILINLKGAQLDQLLEEKKWVAKGS----DVQIPVNEFNEASVKFKQDGISFDQL 203          
BLAST of mRNA_H-elongata_contig6392.13976.1 vs. uniprot
Match: A0A7S2SPG3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPG3_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.720e-30
Identity = 63/147 (42.86%), Postives = 91/147 (61.90%), Query Frame = 0
Query:    8 EGMRPVVEHEYFDHRAVPQLEEYLDEQVKSGTYDFEANKALLKLYQFFPDLCKSESVALMLAKALMNVPSTDFMALVYIVSPPLHRREPVSSLKRAADSLETAKFVDFWQTCAEGDMPALIEKIPGYKKHIREFIVQTLASTFQSVK 154
            E +   +    +D  A+  LE Y+ EQV+  TYDF ANKALLKLYQFFP       VAL+L KALM +PSTD   L+Y+V   +  +EP+ +L R  + LET KFV+FW+    G    L++ I G+ + +R++++  L  TFQS++
Sbjct:   12 ESVATALRRNEYDQDAIELLESYVAEQVEQNTYDFVANKALLKLYQFFPARTNEHMVALILTKALMALPSTDMTLLLYLVPDTVRAKEPILTLVRCHEHLETGKFVEFWEVANLGGNE-LLDAIHGFDEAMRQYMISVLCMTFQSLE 157          
BLAST of mRNA_H-elongata_contig6392.13976.1 vs. uniprot
Match: L8GVU4_ACACA (Eukaryotic translation initiation factor 3 subunit K n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GVU4_ACACA)

HSP 1 Score: 114 bits (286), Expect = 6.100e-28
Identity = 68/192 (35.42%), Postives = 108/192 (56.25%), Query Frame = 0
Query:   23 AVPQLEEYLDEQVKSGTYDFEANKALLKLYQFFPDLCKSESVALMLAKALMNVPSTDFMALVYIVSPPLHRREPVSSLKRAADSLETAKFVDFWQTCAEGDMPA-LIEKIPGYKKHIREFIVQTLASTFQSVKRESMEQSLDLDGVELDAFVAANSNVVSESPDRREFKFALNEFNQIQPKKFKESVEFEKI 213
            ++PQL+ YL EQ+   +YDFEAN ALLK++QF P     + V  +L KALMN+P  DF   +Y++    H+ E V++LK+ ++ LETA+F  FW    E    + L++  PG+++ I+ F V  L   +QSV  + +  ++ L+G  LD FVA      +E          + E NQ +  K  E ++ +K+
Sbjct:   22 SLPQLKAYLQEQIDQRSYDFEANLALLKIFQFNPSHIDIDVVQKVLIKALMNLPHMDFPLSLYVLPEAAHQNEGVAALKKVSNLLETAQFTGFWTLFEEDSATSVLLKNFPGFREAIQSFAVSVLTVAYQSVPVDVLASAVHLNGAALDEFVAKQEGWKTEDDL---VTLPVTELNQARQIKTTEQLDRKKV 210          
BLAST of mRNA_H-elongata_contig6392.13976.1 vs. uniprot
Match: A0A1X6NQY4_PORUM (Eukaryotic translation initiation factor 3 subunit K n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NQY4_PORUM)

HSP 1 Score: 114 bits (285), Expect = 1.050e-27
Identity = 62/168 (36.90%), Postives = 104/168 (61.90%), Query Frame = 0
Query:   13 VVEHEYFDHRAVPQLEEYLDEQVKSGTYDFEANKALLKLYQFFPDLCKSESVALMLAKALMNVPSTDFMALVYIVSPPLHRREPVSSLKRAADSLETAKFVDFWQTCAEGDMPALIEKIPGYKKHIREFIVQTLASTFQSVKRESMEQSLDLDGVELDAFVAANSNVV 180
            +++ + +D   +P LEEY+++QV +GT D  AN A LKLYQF+P   K+  V+ +L KA+M +PSTDF+  +Y++       EP+ +L + A  LET +F DFW   A G +  L++ +PG+ + +R F++  +  T++ V+R  + + L L+GV+  A  AA   V+
Sbjct:   17 LLQSQRYDPDILPTLEEYVEQQVATGTNDAMANLATLKLYQFYPATYKTAVVSKILIKAIMALPSTDFLCAMYLIPAATADDEPIPALVQLASMLETGRFEDFWP--ATGAVRQLLDGVPGFDEAVRSFMLVVIGRTYKRVERTVLARLLGLEGVDEAAEEAAVDEVI 182          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6392.13976.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF51_ECTSI1.650e-10282.01Eukaryotic translation initiation factor 3 k subun... [more]
A0A835Z1S6_9STRA2.540e-7054.30Eukaryotic translation initiation factor 3 k subun... [more]
A0A7S2FZN4_9STRA9.800e-4942.34Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2H0N4_9STRA1.940e-4138.46Eukaryotic translation initiation factor 3 subunit... [more]
W7U338_9STRA4.790e-3838.18Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2WSD7_9STRA2.110e-3738.14Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S4ULZ9_GUITH4.540e-3333.98Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2SPG3_9STRA1.720e-3042.86Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
L8GVU4_ACACA6.100e-2835.42Eukaryotic translation initiation factor 3 subunit... [more]
A0A1X6NQY4_PORUM1.050e-2736.90Eukaryotic translation initiation factor 3 subunit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 123..222
e-value: 1.2E-10
score: 43.4
IPR033464CSN8/PSMD8/EIF3KPFAMPF10075CSN8_PSD8_EIF3Kcoord: 60..177
e-value: 7.7E-15
score: 55.1
IPR016020Translation initiation factor 3, subunit 12, N-terminal, eukaryoticGENE3D1.25.40.250coord: 11..119
e-value: 5.5E-31
score: 108.7
NoneNo IPR availablePANTHERPTHR13022:SF0EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Kcoord: 17..218
IPR009374Eukaryotic translation initiation factor 3 subunit KPANTHERPTHR13022EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11coord: 17..218
IPR009374Eukaryotic translation initiation factor 3 subunit KHAMAPMF_03010eIF3kcoord: 1..221
score: 18.659
IPR000717Proteasome component (PCI) domainPROSITEPS50250PCIcoord: 40..207
score: 12.966
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 17..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6392contigH-elongata_contig6392:6957..9023 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6392.13976.1mRNA_H-elongata_contig6392.13976.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6392 1396..9199 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6392.13976.1 ID=prot_H-elongata_contig6392.13976.1|Name=mRNA_H-elongata_contig6392.13976.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=224bp
MEFPASYEGMRPVVEHEYFDHRAVPQLEEYLDEQVKSGTYDFEANKALLK
LYQFFPDLCKSESVALMLAKALMNVPSTDFMALVYIVSPPLHRREPVSSL
KRAADSLETAKFVDFWQTCAEGDMPALIEKIPGYKKHIREFIVQTLASTF
QSVKRESMEQSLDLDGVELDAFVAANSNVVSESPDRREFKFALNEFNQIQ
PKKFKESVEFEKILKTIDKLSSF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf
IPR033464CSN8_PSD8_EIF3K
IPR016020Transl_init_fac_sub12_N_euk
IPR009374eIF3k
IPR000717PCI_dom
IPR016024ARM-type_fold