prot_H-elongata_contig63908.13973.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig63908.13973.1
Unique Nameprot_H-elongata_contig63908.13973.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length138
Homology
BLAST of mRNA_H-elongata_contig63908.13973.1 vs. uniprot
Match: D7FLP4_ECTSI (rRNA adenine N(6)-methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLP4_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 6.930e-55
Identity = 100/165 (60.61%), Postives = 113/165 (68.48%), Query Frame = 0
Query:    1 VNRNNFRPPPKVDSRVVRIELRNPPPPVNFTEWDGMIRIIFNRKHKTLRSTLTTKCTLKVRVRGV-----VSTEAVGGAGAIXXXXXXXXXX-----------------------DGRVTEADMKQMIESVLSAESLEGKRAAGMDIDDLLSLLSAFNDRGVHFA 137
            VNRNNFRPPPKVDSRVVRIELRNPPPPVNFTEWDGMIR+IFNRKHKTLR+TLTTK TLK+    V     +S  A GG G +                                 DGR TEA++K+M+ESVL  ESLEG+RAA MDIDDLL+LLSAFN++GVHFA
Sbjct:  146 VNRNNFRPPPKVDSRVVRIELRNPPPPVNFTEWDGMIRVIFNRKHKTLRATLTTKATLKLLTSNVNTYRAISRAAAGGNGPVGGGHAKSKAKPARGAAVAVDAMDEEKEGEGDVGDGRATEAEVKEMVESVLERESLEGRRAASMDIDDLLALLSAFNEKGVHFA 310          
BLAST of mRNA_H-elongata_contig63908.13973.1 vs. uniprot
Match: W7TYW7_9STRA (rRNA adenine N(6)-methyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYW7_9STRA)

HSP 1 Score: 147 bits (371), Expect = 3.740e-41
Identity = 75/139 (53.96%), Postives = 95/139 (68.35%), Query Frame = 0
Query:    1 VNRNNFRPPPKVDSRVVRIELRNPPPPVNFTEWDGMIRIIFNRKHKTLRSTLTTKCTLKVRVRGVVSTEAVGG--AGAIXXXXXXXXXXDGRVTEADMKQMIESVLSAESLEGKRAAGMDIDDLLSLLSAFNDRGVHFA 137
            V RNNFRPPPKVDSRVVRIELRNPPPPVNF EWDG++R++FNRKHKTL + LTTK  L V  +   +  A+ G  +G +           G      +K ++E V++  + EGKRAA MD+DD L+LL+ FN RGVHF+
Sbjct:  149 VGRNNFRPPPKVDSRVVRIELRNPPPPVNFNEWDGLVRLVFNRKHKTLHAVLTTKSVLTVLEKNFKTYMALRGKESGEVVAGIEIEGGKTGVPIAGGVKALVEEVVALPAFEGKRAAKMDLDDFLALLAEFNQRGVHFS 287          
BLAST of mRNA_H-elongata_contig63908.13973.1 vs. uniprot
Match: B8C2N6_THAPS (rRNA adenine N(6)-methyltransferase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2N6_THAPS)

HSP 1 Score: 141 bits (356), Expect = 1.960e-38
Identity = 74/137 (54.01%), Postives = 93/137 (67.88%), Query Frame = 0
Query:    1 VNRNNFRPPPKVDSRVVRIELRNPPPPVNFTEWDGMIRIIFNRKHKTLRSTLTTKCTLKVRVRGVVSTEAVGGAGAIXXXXXXXXXXDGRVTEADMKQMIESVLSAESLEGKRAAGMDIDDLLSLLSAFNDRGVHFA 137
            V RNNFRPPPKV+SRVVRIELRNPPPPVNFTEWDGMIR++FNRK+KTLRS L TK T+K+    + +  A+ GA                       Q+IE V++ E  + KRA+ +D+DD L+LL+ FN RG+HFA
Sbjct:  212 VGRNNFRPPPKVESRVVRIELRNPPPPVNFTEWDGMIRLLFNRKNKTLRSVLMTKPTIKMLDENMRTQRALNGASM-------------NTENKTADQIIEDVVAMEQWKDKRASKLDLDDFLALLAEFNKRGIHFA 335          
BLAST of mRNA_H-elongata_contig63908.13973.1 vs. uniprot
Match: A0A7S2HH75_9STRA (rRNA adenine N(6)-methyltransferase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HH75_9STRA)

HSP 1 Score: 137 bits (346), Expect = 3.310e-37
Identity = 74/137 (54.01%), Postives = 95/137 (69.34%), Query Frame = 0
Query:    1 VNRNNFRPPPKVDSRVVRIELRNPPPPVNFTEWDGMIRIIFNRKHKTLRSTLTTKCTLKVRVRGVVSTEAVGGAGAIXXXXXXXXXXDGRVTEADMKQMIESVLSAESLEGKRAAGMDIDDLLSLLSAFNDRGVHFA 137
            V RNNFRPPPKV+SRVVRIELRNPPPPV+FTEWDGMIR++FNRK+KTLRS L TK T+K+    + +  A+                D  V    ++Q+IE V+  E+ +GKRA+ +D+DD L LL+ FN RG+HFA
Sbjct:  186 VGRNNFRPPPKVESRVVRIELRNPPPPVDFTEWDGMIRLLFNRKNKTLRSVLMTKPTIKMLEDNMRTHAAMNNV-----------MLDDSVK---VEQIIEDVVKMETWDGKRASKLDLDDFLDLLAEFNKRGIHFA 308          
BLAST of mRNA_H-elongata_contig63908.13973.1 vs. uniprot
Match: K0TLK0_THAOC (rRNA adenine N(6)-methyltransferase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TLK0_THAOC)

HSP 1 Score: 138 bits (347), Expect = 4.740e-37
Identity = 75/137 (54.74%), Postives = 93/137 (67.88%), Query Frame = 0
Query:    1 VNRNNFRPPPKVDSRVVRIELRNPPPPVNFTEWDGMIRIIFNRKHKTLRSTLTTKCTLKVRVRGVVSTEAVGGAGAIXXXXXXXXXXDGRVTEADMKQMIESVLSAESLEGKRAAGMDIDDLLSLLSAFNDRGVHFA 137
            V RNNFRPPPKV+SRVVRIELRNPPPPV+F EWDGMIR++FNRK+KTLRS L TK TLK+    + +  A+                D      D +Q+IE V++ E  + KRA+ +D+DD LSLL+ FN RGVHFA
Sbjct:  214 VGRNNFRPPPKVESRVVRIELRNPPPPVDFIEWDGMIRLLFNRKNKTLRSVLMTKSTLKMLDENIRTHRALN--------ERKDDMCDDE--NKDARQIIEQVVAMEQWKDKRASKLDLDDFLSLLAEFNKRGVHFA 340          
BLAST of mRNA_H-elongata_contig63908.13973.1 vs. uniprot
Match: A0A812WD46_SYMMI (rRNA adenine N(6)-methyltransferase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WD46_SYMMI)

HSP 1 Score: 137 bits (346), Expect = 1.130e-36
Identity = 76/156 (48.72%), Postives = 98/156 (62.82%), Query Frame = 0
Query:    1 VNRNNFRPPPKVDSRVVRIELRNPPPPVNFTEWDGMIRIIFNRKHKTLRSTLTTKCTLKVRVRGVVSTEAVGGAGAIXXXXXXXXXXDGRV--------TEAD-----------MKQMIESVLSAESLEGKRAAGMDIDDLLSLLSAFNDRGVHFA 137
            V + NFRPPPKVDS VVRIELRNPPPPVNF EWDG++R++FNRKHKTLR+ L TK TL++    + + +A+ G GA            G          TEA+           MK+++E+VL+      KRAA MDIDD L LL+AFN +G+HF+
Sbjct:  211 VGKANFRPPPKVDSLVVRIELRNPPPPVNFMEWDGLVRLLFNRKHKTLRAVLCTKNTLRLLEENMKTQQALHGRGASANDPTGIASMGGSANEEAMEVATEAEGGGEGGGPLQVMKELVEAVLNETGYSEKRAARMDIDDFLCLLAAFNAKGIHFS 366          
BLAST of mRNA_H-elongata_contig63908.13973.1 vs. uniprot
Match: A0A835ZDH2_9STRA (rRNA adenine N(6)-methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDH2_9STRA)

HSP 1 Score: 135 bits (339), Expect = 2.590e-36
Identity = 76/149 (51.01%), Postives = 95/149 (63.76%), Query Frame = 0
Query:    1 VNRNNFRPPPKVDSRVVRIELRNPPPPVNFTEWDGMIRIIFNRKHKTLRSTLTTKCTLKV------RVRGVVSTEAVGG------AGAIXXXXXXXXXXDGRVTEADMKQMIESVLSAESLEGKRAAGMDIDDLLSLLSAFNDRGVHFA 137
            V RNNFRPPPKVDSRVVR+ELRNPPPPVNFTEWDG++R++FNRK+KTL + L TK TL++        R +  TE  G       A A+          DG      +K ++E VLS    + KRA+ MD DD L+LLSAFN  G+HF+
Sbjct:  149 VGRNNFRPPPKVDSRVVRVELRNPPPPVNFTEWDGLVRLLFNRKNKTLHAVLCTKATLRLLEDNLKTYRAMQGTEDSGXXXXXXXAMAVDAADGSGGGSDGE----RVKTIVEEVLSRPEFKDKRASKMDQDDFLALLSAFNASGIHFS 293          
BLAST of mRNA_H-elongata_contig63908.13973.1 vs. uniprot
Match: A0A7R9ZBI4_9STRA (rRNA adenine N(6)-methyltransferase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZBI4_9STRA)

HSP 1 Score: 129 bits (325), Expect = 1.210e-35
Identity = 72/138 (52.17%), Postives = 91/138 (65.94%), Query Frame = 0
Query:    1 VNRNNFRPPPKVDSRVVRIELRNPPPPVNFTEWDGMIRIIFNRKHKTLRSTLTTKCTLKVRVRGVVSTEAVGGAGAIXXXXXXXXXXDGRVTEADMKQMIESVLSAESL-EGKRAAGMDIDDLLSLLSAFNDRGVHFA 137
            V RNNFRPPPKV+SRVVRIE RNPPPPVNFTEWDGMIR++FNRK+KTLR+ L  K T+K+    + +  A+ G              D  V    ++ +IE V+   S   GKRAA +D+DD L LL+ FN RG+HF+
Sbjct:   44 VGRNNFRPPPKVESRVVRIEPRNPPPPVNFTEWDGMIRLLFNRKNKTLRAVLMVKATIKMLEENMRTHAALNGT-----------MLDDSVR---VENIIEDVVGENSRWAGKRAAKLDLDDFLQLLAEFNKRGIHFS 167          
BLAST of mRNA_H-elongata_contig63908.13973.1 vs. uniprot
Match: A0A7S2RVD9_9STRA (rRNA adenine N(6)-methyltransferase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RVD9_9STRA)

HSP 1 Score: 134 bits (336), Expect = 1.480e-35
Identity = 80/137 (58.39%), Postives = 99/137 (72.26%), Query Frame = 0
Query:    1 VNRNNFRPPPKVDSRVVRIELRNPPPPVNFTEWDGMIRIIFNRKHKTLRSTLTTKCTLKVRVRGVVSTEAVGGAGAIXXXXXXXXXXDGRVTEADMKQMIESVLSAESLEGKRAAGMDIDDLLSLLSAFNDRGVHFA 137
            V RNNFRPPPKV+SRVVRIE RNPPP VNF EWDGMIR++FNRK+KTLRS L TK T+K+      +  ++      XXXXXXXXXX     E  +KQ+IE V S E  + KR++ +D+DD L+LL+ FN RG+HFA
Sbjct:  189 VGRNNFRPPPKVESRVVRIEPRNPPPKVNFVEWDGMIRLLFNRKNKTLRSVLLTKPTIKMLEENRRTYRSLQXXXXXXXXXXXXXXXXXXXDEISIKQLIEDVTSMEEWKDKRSSKLDLDDFLALLAEFNSRGIHFA 325          
BLAST of mRNA_H-elongata_contig63908.13973.1 vs. uniprot
Match: A0A448Z245_9STRA (rRNA adenine N(6)-methyltransferase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z245_9STRA)

HSP 1 Score: 133 bits (335), Expect = 2.900e-35
Identity = 72/143 (50.35%), Postives = 93/143 (65.03%), Query Frame = 0
Query:    1 VNRNNFRPPPKVDSRVVRIELRNPPPPVNFTEWDGMIRIIFNRKHKTLRSTLTTKCTLKVRVRGVVSTEAV-------GGAGAIXXXXXXXXXXDGRVTEADMKQMIESVLSAESLEGKRAAGMDIDDLLSLLSAFNDRGVHF 136
            V RNNFRPPPKV+SRVVRIEL+NPPPPVNF EWDGM+R++FNRK+KTLRS L TK TLK+      + +++       GGA A+          D       +K ++E +LS    + KRA  +D+DD L LLS F+D GV+F
Sbjct:  206 VGRNNFRPPPKVESRVVRIELKNPPPPVNFVEWDGMVRLLFNRKNKTLRSVLNTKATLKLLEENRKTLQSLKKTQRKSGGADAMS---------DDEGENESVKDILERILSKPEYKDKRARQLDLDDFLQLLSDFHDEGVYF 339          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63908.13973.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLP4_ECTSI6.930e-5560.61rRNA adenine N(6)-methyltransferase n=2 Tax=Ectoca... [more]
W7TYW7_9STRA3.740e-4153.96rRNA adenine N(6)-methyltransferase n=2 Tax=Monodo... [more]
B8C2N6_THAPS1.960e-3854.01rRNA adenine N(6)-methyltransferase n=1 Tax=Thalas... [more]
A0A7S2HH75_9STRA3.310e-3754.01rRNA adenine N(6)-methyltransferase n=1 Tax=Helico... [more]
K0TLK0_THAOC4.740e-3754.74rRNA adenine N(6)-methyltransferase n=1 Tax=Thalas... [more]
A0A812WD46_SYMMI1.130e-3648.72rRNA adenine N(6)-methyltransferase n=1 Tax=Symbio... [more]
A0A835ZDH2_9STRA2.590e-3651.01rRNA adenine N(6)-methyltransferase n=1 Tax=Tribon... [more]
A0A7R9ZBI4_9STRA1.210e-3552.17rRNA adenine N(6)-methyltransferase n=1 Tax=Pseudi... [more]
A0A7S2RVD9_9STRA1.480e-3558.39rRNA adenine N(6)-methyltransferase n=1 Tax=Eucamp... [more]
A0A448Z245_9STRA2.900e-3550.35rRNA adenine N(6)-methyltransferase n=1 Tax=Pseudo... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001737Ribosomal RNA adenine methyltransferase KsgA/ErmPFAMPF00398RrnaADcoord: 1..55
e-value: 2.0E-11
score: 43.5
IPR001737Ribosomal RNA adenine methyltransferase KsgA/ErmPANTHERPTHR11727DIMETHYLADENOSINE TRANSFERASEcoord: 1..131
IPR001737Ribosomal RNA adenine methyltransferase KsgA/ErmPROSITEPS51689SAM_RNA_A_N6_MTcoord: 1..133
score: 15.123
NoneNo IPR availableGENE3D1.10.8.480coord: 26..137
e-value: 6.5E-22
score: 80.2
NoneNo IPR availablePANTHERPTHR11727:SF7DIMETHYLADENOSINE TRANSFERASE-RELATEDcoord: 1..131
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 1..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig63908contigH-elongata_contig63908:3..965 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig63908.13973.1mRNA_H-elongata_contig63908.13973.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig63908 3..965 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig63908.13973.1 ID=prot_H-elongata_contig63908.13973.1|Name=mRNA_H-elongata_contig63908.13973.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=138bp
VNRNNFRPPPKVDSRVVRIELRNPPPPVNFTEWDGMIRIIFNRKHKTLRS
TLTTKCTLKVRVRGVVSTEAVGGAGAIVSTEAVGGAGDGRVTEADMKQMI
ESVLSAESLEGKRAAGMDIDDLLSLLSAFNDRGVHFA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001737KsgA/Erm
IPR029063SAM-dependent_MTases