prot_H-elongata_contig639.13972.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig639.13972.1
Unique Nameprot_H-elongata_contig639.13972.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length332
Homology
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BLAST of mRNA_H-elongata_contig639.13972.1 vs. uniprot
Match: D8LR38_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR38_ECTSI)

HSP 1 Score: 229 bits (584), Expect = 6.770e-64
Identity = 147/332 (44.28%), Postives = 203/332 (61.14%), Query Frame = 0 
Query:    5 AMTAAAREKIFRQLPAEERQIIRSMKSNDAYIRRKRDAARNRIREAERMVDKKIEIFDGTSGQWRKFTVDRVSVRWVDLGTRLVLRHVVRAIGDEDEKKDNDDEVGRKVYHKDTRKNHSGQENTERAVNYRARSEIEQLSSDDGCR--------RQAMAEIDLSEVRWTEHTGG-KHMLGNSTTKMKLADFRDSGSGEITSNTERTMEKLKQELEQHMQNLSKEREVEDQAARAAKEAEVSKASHSKTASEVVVAQGQKA-RSDIQSLSRSIFNGWKLGISVPPARKGATSATALSVARRQWVEDQVATAVGQAEMQINIVEQEITSRRRRE 326
            A+ AA  EK   +LP +ER++IRSMKS D Y++RKRDA ++RI EAE MV +KIEIFDG +  WR   +  V VRWVDLGT+LVLRHVVR +G E+++ DN+    R     +TR   + Q    R  +           S  G R        R A AE+DL+EVRW E+TG  K    + +   KLA+F+ SGS  +   TE+ +  L+ EL + +Q L K R++ED A   AK+ E SK     TA   ++++ QK  +++IQ+L+RS+ N WKLGI  PP+ K AT+  ALS ARR+WV DQ+ATAVG++E Q   +  E  +RRR+E
Sbjct: 1131 ALDAAEVEKQIHRLPPDERRLIRSMKSKDGYLKRKRDAQQHRIAEAEAMVGRKIEIFDGAANVWRTVVIASVCVRWVDLGTKLVLRHVVRVLGAEEDEPDNN----RTESENETRGQGNNQVEGRRKSDGGDGDRXXXXGSRGGGRDNSVAPRSRAATAEVDLNEVRWAEYTGRPKERKPSRSNAAKLAEFKVSGSDAVLQKTEKALLALQHELGEEVQALKKRRDIEDTAVSMAKDVETSKVKVHSTAEATILSRSQKKNKAEIQTLARSLRNDWKLGIGAPPSGKRATAGVALSEARRKWVNDQIATAVGRSEQQFKFLAAETAARRRKE 1458
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig639.13972.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LR38_ECTSI6.770e-6444.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 40..60
NoneNo IPR availableCOILSCoilCoilcoord: 195..233

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig639contigH-elongata_contig639:16823..19733 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig639.13972.1mRNA_H-elongata_contig639.13972.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig639 16823..19760 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig639.13972.1 ID=prot_H-elongata_contig639.13972.1|Name=mRNA_H-elongata_contig639.13972.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=332bp
MAGAAMTAAAREKIFRQLPAEERQIIRSMKSNDAYIRRKRDAARNRIREA
ERMVDKKIEIFDGTSGQWRKFTVDRVSVRWVDLGTRLVLRHVVRAIGDED
EKKDNDDEVGRKVYHKDTRKNHSGQENTERAVNYRARSEIEQLSSDDGCR
RQAMAEIDLSEVRWTEHTGGKHMLGNSTTKMKLADFRDSGSGEITSNTER
TMEKLKQELEQHMQNLSKEREVEDQAARAAKEAEVSKASHSKTASEVVVA
QGQKARSDIQSLSRSIFNGWKLGISVPPARKGATSATALSVARRQWVEDQ
VATAVGQAEMQINIVEQEITSRRRREASDGL*
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