prot_H-elongata_contig63894.13969.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig63894.13969.1
Unique Nameprot_H-elongata_contig63894.13969.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length53
Homology
BLAST of mRNA_H-elongata_contig63894.13969.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 6.180e-19
Identity = 42/53 (79.25%), Postives = 46/53 (86.79%), Query Frame = 0
Query:    1 LDPLEFWQARSANFPHLARLARRVLAIPETQAESERLFSSAGNIVTKNRIKLA 53
            LDPL++W+ R A+FPHLA LARRVLAIP TQAESERLFS AGNIVTKNR  LA
Sbjct:  221 LDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLA 273          
BLAST of mRNA_H-elongata_contig63894.13969.1 vs. uniprot
Match: A0A6H5JPB0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB0_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 7.680e-13
Identity = 35/43 (81.40%), Postives = 37/43 (86.05%), Query Frame = 0
Query:   11 SANFPHLARLARRVLAIPETQAESERLFSSAGNIVTKNRIKLA 53
            S +FPHLA LARRVLAIP TQA+SERLFS AGNIVTKNR  LA
Sbjct:  151 STDFPHLANLARRVLAIPATQAKSERLFSCAGNIVTKNRNNLA 193          
BLAST of mRNA_H-elongata_contig63894.13969.1 vs. uniprot
Match: A0A1A7ZCN3_NOTFU (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A1A7ZCN3_NOTFU)

HSP 1 Score: 62.0 bits (149), Expect = 3.300e-11
Identity = 28/52 (53.85%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    2 DPLEFWQARSANFPHLARLARRVLAIPETQAESERLFSSAGNIVTKNRIKLA 53
            +PL++W++  A FP LA LA+  L +P T   SERLFSSAGNIV+K R  L+
Sbjct:   32 NPLQWWKSNEARFPSLASLAKSYLCVPATSTPSERLFSSAGNIVSKKRTSLS 83          
BLAST of mRNA_H-elongata_contig63894.13969.1 vs. uniprot
Match: A0A015I940_RHIIW (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A015I940_RHIIW)

HSP 1 Score: 65.5 bits (158), Expect = 4.270e-11
Identity = 29/51 (56.86%), Postives = 38/51 (74.51%), Query Frame = 0
Query:    2 DPLEFWQARSANFPHLARLARRVLAIPETQAESERLFSSAGNIVTKNRIKL 52
            +PL++W+ RS NFP LA+LAR+ LAIP T   SERLFS AGN+++  R  L
Sbjct:  660 NPLDWWRIRSQNFPKLAKLARKYLAIPATSVSSERLFSDAGNLISAKRTSL 710          
BLAST of mRNA_H-elongata_contig63894.13969.1 vs. uniprot
Match: U9UP26_RHIID (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) TaxID=747089 RepID=U9UP26_RHIID)

HSP 1 Score: 60.8 bits (146), Expect = 7.030e-11
Identity = 28/51 (54.90%), Postives = 37/51 (72.55%), Query Frame = 0
Query:    2 DPLEFWQARSANFPHLARLARRVLAIPETQAESERLFSSAGNIVTKNRIKL 52
            + L++WQ    NFP LA+LAR+ LAIP T   SERLFS+AGN+++  RI L
Sbjct:   14 NTLDWWQICFQNFPKLAKLARKYLAIPATSVSSERLFSNAGNVISVKRINL 64          
BLAST of mRNA_H-elongata_contig63894.13969.1 vs. uniprot
Match: A0A1A8B204_NOTFU (6-phosphofructo-2-kinase/fructose-2, 6-biphosphatase 1 n=2 Tax=Nothobranchius TaxID=28779 RepID=A0A1A8B204_NOTFU)

HSP 1 Score: 61.6 bits (148), Expect = 9.080e-11
Identity = 25/52 (48.08%), Postives = 38/52 (73.08%), Query Frame = 0
Query:    2 DPLEFWQARSANFPHLARLARRVLAIPETQAESERLFSSAGNIVTKNRIKLA 53
            DP  +W+     FPH+A++A+R+L +P T   SER+FS+AG+IV+ NR +LA
Sbjct:   58 DPFRWWKTNEHKFPHVAKVAKRLLCVPGTSVPSERIFSTAGDIVSANRSRLA 109          
BLAST of mRNA_H-elongata_contig63894.13969.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 1.490e-10
Identity = 29/50 (58.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:    3 PLEFWQARSANFPHLARLARRVLAIPETQAESERLFSSAGNIVTKNRIKL 52
            PLE+W+ ++  +P LA LARRVL IP  QA+SER+FSSAG +VTK R ++
Sbjct:  480 PLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARM 529          
BLAST of mRNA_H-elongata_contig63894.13969.1 vs. uniprot
Match: A0A1A8M216_9TELE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothobranchius pienaari TaxID=704102 RepID=A0A1A8M216_9TELE)

HSP 1 Score: 61.2 bits (147), Expect = 1.900e-10
Identity = 29/52 (55.77%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    2 DPLEFWQARSANFPHLARLARRVLAIPETQAESERLFSSAGNIVTKNRIKLA 53
            DPL +W+A    FP LA+LA  +L IP T   SERLFS+AGNIV+K R  L+
Sbjct:   78 DPLIWWKANEQRFPTLAKLANSLLCIPATSTPSERLFSAAGNIVSKKRASLS 129          
BLAST of mRNA_H-elongata_contig63894.13969.1 vs. uniprot
Match: A0A819G7X1_9BILA (Hypothetical protein n=1 Tax=Rotaria sordida TaxID=392033 RepID=A0A819G7X1_9BILA)

HSP 1 Score: 60.8 bits (146), Expect = 4.940e-10
Identity = 28/52 (53.85%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    2 DPLEFWQARSANFPHLARLARRVLAIPETQAESERLFSSAGNIVTKNRIKLA 53
            +PL FW+   + +P LA++A+RV A+P T A  ER FS AGNIVTK R KL+
Sbjct:  107 NPLRFWKQNHSLYPRLAKIAKRVFAVPATSAAVEREFSLAGNIVTKKRSKLS 158          
BLAST of mRNA_H-elongata_contig63894.13969.1 vs. uniprot
Match: A0A2G8JJ67_STIJA (Putative zinc finger BED domain-containing protein 1-like n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JJ67_STIJA)

HSP 1 Score: 62.4 bits (150), Expect = 5.200e-10
Identity = 27/52 (51.92%), Postives = 41/52 (78.85%), Query Frame = 0
Query:    1 LDPLEFWQARSANFPHLARLARRVLAIPETQAESERLFSSAGNIVTKNRIKL 52
            +DPL++W+A+   FP LA LAR VLA+P T A +ERLFS+AG +++K R+++
Sbjct:  523 IDPLQWWKAQQNWFPRLAHLARIVLAVPVTSAPAERLFSAAGELLSKKRLRM 574          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63894.13969.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWI1_9PHAE6.180e-1979.25Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JPB0_9PHAE7.680e-1381.40Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A1A7ZCN3_NOTFU3.300e-1153.85Dimer_Tnp_hAT domain-containing protein n=1 Tax=No... [more]
A0A015I940_RHIIW4.270e-1156.86Dimer_Tnp_hAT domain-containing protein n=2 Tax=Rh... [more]
U9UP26_RHIID7.030e-1154.90Dimer_Tnp_hAT domain-containing protein n=1 Tax=Rh... [more]
A0A1A8B204_NOTFU9.080e-1148.086-phosphofructo-2-kinase/fructose-2, 6-biphosphata... [more]
A0A6H5JHP9_9PHAE1.490e-1058.00Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A1A8M216_9TELE1.900e-1055.77Dimer_Tnp_hAT domain-containing protein n=1 Tax=No... [more]
A0A819G7X1_9BILA4.940e-1053.85Hypothetical protein n=1 Tax=Rotaria sordida TaxID... [more]
A0A2G8JJ67_STIJA5.200e-1051.92Putative zinc finger BED domain-containing protein... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 1..52
e-value: 1.1E-15
score: 57.2
NoneNo IPR availablePANTHERPTHR46169FAMILY NOT NAMEDcoord: 2..49
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 2..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig63894contigH-elongata_contig63894:2730..2888 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig63894.13969.1mRNA_H-elongata_contig63894.13969.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig63894 2730..2888 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig63894.13969.1 ID=prot_H-elongata_contig63894.13969.1|Name=mRNA_H-elongata_contig63894.13969.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=53bp
LDPLEFWQARSANFPHLARLARRVLAIPETQAESERLFSSAGNIVTKNRI
KLA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008906HATC_C_dom
IPR012337RNaseH-like_sf