prot_H-elongata_contig63859.13962.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig63859.13962.1
Unique Nameprot_H-elongata_contig63859.13962.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length165
Homology
BLAST of mRNA_H-elongata_contig63859.13962.1 vs. uniprot
Match: A0A6H5KRK2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRK2_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 1.320e-12
Identity = 66/140 (47.14%), Postives = 76/140 (54.29%), Query Frame = 0
Query:    2 ASGYDTNLAAEYCVTGIPRGRAAYA---SPAPTPPKADARNRSKTLIGNNVVPMGANNSGGGGLSASNGWRRWSYDPYGASITSGTSSGGGNGLGSTVPGAGAPGGWSGNPGLXXXXXSGYRVEPAKDSSGALDWRSMPR 138
            ASGYDTNLAAEYCVTGIP  RAA     SPA TP  + +R R K LIGNNVVP G N+   GG+ A   WRR              S+GGG     T  GA + G   G  G       G  V+ A  ++G LDWR+MPR
Sbjct:  369 ASGYDTNLAAEYCVTGIPPDRAASVAALSPAATPAPSSSRGR-KGLIGNNVVPSGGNS---GGVPA---WRR-------------ASAGGG-----TQTGAISNGXXYG--GAMTAARGGAAVDGAGRTTG-LDWRNMPR 480          
BLAST of mRNA_H-elongata_contig63859.13962.1 vs. uniprot
Match: D7FWZ3_ECTSI (UBA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWZ3_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 1.340e-12
Identity = 63/140 (45.00%), Postives = 73/140 (52.14%), Query Frame = 0
Query:    2 ASGYDTNLAAEYCVTGIPRGRAAYA---SPAPTPPKADARNRSKTLIGNNVVPMGANNSGGGGLSASNGWRRWSYDPYGASITSGTSSGGGNGLGSTVPGAGAPGGWSGNPGLXXXXXSGYRVEPAKDSSGALDWRSMPR 138
            ASGYDTNLAAEYCVTGIP  RAA     SPA  P  + +R R K LIGNNVVP G N+ G   + A   WRR S    G + T   S+GGG G                  G       G  V+ A  ++G LDWR+MPR
Sbjct:  147 ASGYDTNLAAEYCVTGIPPDRAASVAALSPAAAPAPSSSRGR-KGLIGNNVVPSGGNSVG---VPA---WRRASAG--GGTQTGAVSNGGGYG------------------GAMTAAWGGAAVDGAGRTTG-LDWRNMPR 258          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63859.13962.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KRK2_9PHAE1.320e-1247.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWZ3_ECTSI1.340e-1245.00UBA domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig63859contigH-elongata_contig63859:1084..1578 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig63859.13962.1mRNA_H-elongata_contig63859.13962.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig63859 1061..2724 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig63859.13962.1 ID=prot_H-elongata_contig63859.13962.1|Name=mRNA_H-elongata_contig63859.13962.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=165bp
MASGYDTNLAAEYCVTGIPRGRAAYASPAPTPPKADARNRSKTLIGNNVV
PMGANNSGGGGLSASNGWRRWSYDPYGASITSGTSSGGGNGLGSTVPGAG
APGGWSGNPGLGAGAGSGYRVEPAKDSSGALDWRSMPRSTGGGRDVNGYS
SATNGSGGGGIVDV*
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