prot_H-elongata_contig63840.13960.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig63840.13960.1
Unique Nameprot_H-elongata_contig63840.13960.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length89
Homology
BLAST of mRNA_H-elongata_contig63840.13960.1 vs. uniprot
Match: D8LCV2_ECTSI (UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCV2_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 4.080e-48
Identity = 77/89 (86.52%), Postives = 83/89 (93.26%), Query Frame = 0
Query:    1 GQSFVVACAVLAHNVHELRSGRNSENHTFSAMLLLPFISTTLALLRFNWYPARVFVGDTYCYFAGMTFAAVGIHGHFSKTLILMFMPQV 89
            GQSFVVACA+LAHN+HELR GR++ NHTFSAMLLLPFI TTL LLR+NWYPAR FVGDTYCYFAGMTFA VGIHGHFSKTLILMF+PQV
Sbjct:  246 GQSFVVACAILAHNMHELRRGRDTGNHTFSAMLLLPFIGTTLGLLRYNWYPARAFVGDTYCYFAGMTFAVVGIHGHFSKTLILMFLPQV 334          
BLAST of mRNA_H-elongata_contig63840.13960.1 vs. uniprot
Match: A0A7S0FMV2_9STRA (UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FMV2_9STRA)

HSP 1 Score: 134 bits (336), Expect = 2.480e-35
Identity = 64/90 (71.11%), Postives = 75/90 (83.33%), Query Frame = 0
Query:    1 GQSFVVACAVLAHNVHELRSGR-NSENHTFSAMLLLPFISTTLALLRFNWYPARVFVGDTYCYFAGMTFAAVGIHGHFSKTLILMFMPQV 89
            GQS+V+ CAVL HN+ E+R G  +SENH FS M++L FIS TLALLR NWYPA VFVGDT+CYFAGMTFA VGI GHFSKTL+L F+PQ+
Sbjct:  282 GQSYVMGCAVLFHNLIEIRLGTASSENHLFSVMIMLSFISVTLALLRHNWYPASVFVGDTFCYFAGMTFAVVGILGHFSKTLLLFFIPQI 371          
BLAST of mRNA_H-elongata_contig63840.13960.1 vs. uniprot
Match: K0R4D1_THAOC (UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R4D1_THAOC)

HSP 1 Score: 132 bits (332), Expect = 4.480e-35
Identity = 60/90 (66.67%), Postives = 75/90 (83.33%), Query Frame = 0
Query:    1 GQSFVVACAVLAHNVHELRS-GRNSENHTFSAMLLLPFISTTLALLRFNWYPARVFVGDTYCYFAGMTFAAVGIHGHFSKTLILMFMPQV 89
            GQS+++ C+VL HN+ E+R    +SENH FSAM++LPF+  +LALLR NWYPA+VFVGDTYCYFAGMT A VGI GHFSKTL+L F+PQ+
Sbjct:  234 GQSYIIGCSVLLHNLIEIRCRSLSSENHVFSAMIMLPFLGVSLALLRHNWYPAQVFVGDTYCYFAGMTLAVVGISGHFSKTLLLFFIPQL 323          
BLAST of mRNA_H-elongata_contig63840.13960.1 vs. uniprot
Match: A0A7S4NEZ8_9STRA (UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NEZ8_9STRA)

HSP 1 Score: 132 bits (331), Expect = 4.770e-35
Identity = 62/90 (68.89%), Postives = 73/90 (81.11%), Query Frame = 0
Query:    1 GQSFVVACAVLAHNVHELRSGR-NSENHTFSAMLLLPFISTTLALLRFNWYPARVFVGDTYCYFAGMTFAAVGIHGHFSKTLILMFMPQV 89
            GQS+V+ CAVL HN  E+R+G  ++ENH FSAM++L F+  TL LLR NWYPA VFVGDT+CYFAGM FA VGI GHFSKTL+L FMPQV
Sbjct:  215 GQSYVIGCAVLFHNFIEIRAGSLSAENHMFSAMIMLSFVGVTLGLLRHNWYPASVFVGDTFCYFAGMAFAVVGILGHFSKTLLLFFMPQV 304          
BLAST of mRNA_H-elongata_contig63840.13960.1 vs. uniprot
Match: A0A8J9X392_PHATR (Hypothetical protein n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X392_PHATR)

HSP 1 Score: 127 bits (318), Expect = 1.050e-34
Identity = 59/90 (65.56%), Postives = 71/90 (78.89%), Query Frame = 0
Query:    1 GQSFVVACAVLAHNVHELRSGRN-SENHTFSAMLLLPFISTTLALLRFNWYPARVFVGDTYCYFAGMTFAAVGIHGHFSKTLILMFMPQV 89
            GQS+V+ CAVL HN+ E+R   N  ENH FS M++L F+  TL LL+ NW+PA VFVGDT+CYFAGMTFA VGI GHFSKTL+L F+PQV
Sbjct:   32 GQSYVIGCAVLVHNLLEIRFHNNLEENHLFSVMVMLSFVGVTLGLLKHNWFPASVFVGDTFCYFAGMTFAVVGILGHFSKTLLLFFIPQV 121          
BLAST of mRNA_H-elongata_contig63840.13960.1 vs. uniprot
Match: A0A1Z5K570_FISSO (UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K570_FISSO)

HSP 1 Score: 132 bits (331), Expect = 1.170e-34
Identity = 61/89 (68.54%), Postives = 73/89 (82.02%), Query Frame = 0
Query:    1 GQSFVVACAVLAHNVHELRSGRNSENHTFSAMLLLPFISTTLALLRFNWYPARVFVGDTYCYFAGMTFAAVGIHGHFSKTLILMFMPQV 89
            GQS+V+ACAVL HN+ E++    ++NH FS ML+L FI  TL LLR NWYPA VFVGDT+CYFAGMTFA VGI GHFSKTL+L+F+PQV
Sbjct:  261 GQSYVIACAVLLHNLMEIQRDGPADNHLFSVMLMLCFIGVTLGLLRHNWYPATVFVGDTFCYFAGMTFAVVGILGHFSKTLLLLFIPQV 349          
BLAST of mRNA_H-elongata_contig63840.13960.1 vs. uniprot
Match: B8BWM8_THAPS (UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWM8_THAPS)

HSP 1 Score: 129 bits (324), Expect = 2.430e-34
Identity = 62/90 (68.89%), Postives = 74/90 (82.22%), Query Frame = 0
Query:    1 GQSFVVACAVLAHNVHELRSGRNS-ENHTFSAMLLLPFISTTLALLRFNWYPARVFVGDTYCYFAGMTFAAVGIHGHFSKTLILMFMPQV 89
            GQS+V+ CAVL HN+ E+++   + ENH FSAM+LL F+  +LALLR NWYPA VFVGDTYCYFAGMTFA VGI GHFSKTL+L F+PQV
Sbjct:  178 GQSYVIGCAVLFHNLIEIQARSIAWENHVFSAMILLSFLGVSLALLRHNWYPASVFVGDTYCYFAGMTFAVVGILGHFSKTLLLFFIPQV 267          
BLAST of mRNA_H-elongata_contig63840.13960.1 vs. uniprot
Match: A0A6U5M6M7_9STRA (UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5M6M7_9STRA)

HSP 1 Score: 130 bits (328), Expect = 5.360e-34
Identity = 62/91 (68.13%), Postives = 71/91 (78.02%), Query Frame = 0
Query:    1 GQSFVVACAVLAHNVHELRSG--RNSENHTFSAMLLLPFISTTLALLRFNWYPARVFVGDTYCYFAGMTFAAVGIHGHFSKTLILMFMPQV 89
            GQS++VACA+L HN+ EL S     +  H FSAM++  F+  TL LLR NWYPARVFVGDTYCYFAGM FA VGIHGHFSKTL+L FMPQV
Sbjct:  308 GQSYIVACAILVHNLLELFSSDATAAAPHLFSAMIMFSFVGVTLGLLRHNWYPARVFVGDTYCYFAGMAFAVVGIHGHFSKTLLLFFMPQV 398          
BLAST of mRNA_H-elongata_contig63840.13960.1 vs. uniprot
Match: A0A448ZTD2_9STRA (UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZTD2_9STRA)

HSP 1 Score: 130 bits (326), Expect = 5.630e-34
Identity = 61/90 (67.78%), Postives = 71/90 (78.89%), Query Frame = 0
Query:    1 GQSFVVACAVLAHNVHELRS-GRNSENHTFSAMLLLPFISTTLALLRFNWYPARVFVGDTYCYFAGMTFAAVGIHGHFSKTLILMFMPQV 89
            GQS+V+ CA+L HN  E+RS     ENH FSAM++L F+  TL LLR NWYPA VFVGDT+CYFAGMTFA VGI GHFSKTL+L F+PQV
Sbjct:  255 GQSYVIGCAILLHNFIEIRSQSLTQENHLFSAMIILSFVGVTLGLLRHNWYPASVFVGDTFCYFAGMTFAVVGILGHFSKTLLLFFIPQV 344          
BLAST of mRNA_H-elongata_contig63840.13960.1 vs. uniprot
Match: A0A7S3V6M9_9STRA (UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V6M9_9STRA)

HSP 1 Score: 130 bits (326), Expect = 1.110e-33
Identity = 60/90 (66.67%), Postives = 74/90 (82.22%), Query Frame = 0
Query:    1 GQSFVVACAVLAHNVHELRSGRNS-ENHTFSAMLLLPFISTTLALLRFNWYPARVFVGDTYCYFAGMTFAAVGIHGHFSKTLILMFMPQV 89
            GQS+++ CAVL HN+ E++ G  + ENH FSAM++L FI  T+ALL+ NWYPA VFVGDT+CYFAGMTFA VGI GHFSKTL+L F+PQV
Sbjct:  316 GQSYIIGCAVLLHNLIEIKHGSYARENHLFSAMIMLSFIGVTMALLKHNWYPASVFVGDTFCYFAGMTFAVVGILGHFSKTLLLFFIPQV 405          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63840.13960.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCV2_ECTSI4.080e-4886.52UDP-N-acetylglucosamine--dolichyl-phosphate N-acet... [more]
A0A7S0FMV2_9STRA2.480e-3571.11UDP-N-acetylglucosamine--dolichyl-phosphate N-acet... [more]
K0R4D1_THAOC4.480e-3566.67UDP-N-acetylglucosamine--dolichyl-phosphate N-acet... [more]
A0A7S4NEZ8_9STRA4.770e-3568.89UDP-N-acetylglucosamine--dolichyl-phosphate N-acet... [more]
A0A8J9X392_PHATR1.050e-3465.56Hypothetical protein n=1 Tax=Phaeodactylum tricorn... [more]
A0A1Z5K570_FISSO1.170e-3468.54UDP-N-acetylglucosamine--dolichyl-phosphate N-acet... [more]
B8BWM8_THAPS2.430e-3468.89UDP-N-acetylglucosamine--dolichyl-phosphate N-acet... [more]
A0A6U5M6M7_9STRA5.360e-3468.13UDP-N-acetylglucosamine--dolichyl-phosphate N-acet... [more]
A0A448ZTD2_9STRA5.630e-3467.78UDP-N-acetylglucosamine--dolichyl-phosphate N-acet... [more]
A0A7S3V6M9_9STRA1.110e-3366.67UDP-N-acetylglucosamine--dolichyl-phosphate N-acet... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000715Glycosyl transferase, family 4PFAMPF00953Glycos_transf_4coord: 1..75
e-value: 4.2E-14
score: 52.8
IPR033895UDP-GlcNAc-dolichyl-phosphate GlcNAc phosphotransferasePANTHERPTHR10571UDP-N-ACETYLGLUCOSAMINE--DOLICHYL-PHOSPHATE N-ACETYLGLUCOSAMINEPHOSPHOTRANSFERASEcoord: 1..89
NoneNo IPR availablePANTHERPTHR10571:SF0UDP-N-ACETYLGLUCOSAMINE--DOLICHYL-PHOSPHATE N-ACETYLGLUCOSAMINEPHOSPHOTRANSFERASEcoord: 1..89
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 48..58
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 59..77
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..47
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 78..89
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..27
NoneNo IPR availableTMHMMTMhelixcoord: 55..77
NoneNo IPR availableTMHMMTMhelixcoord: 28..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig63840contigH-elongata_contig63840:300..2602 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig63840.13960.1mRNA_H-elongata_contig63840.13960.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig63840 300..2602 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig63840.13960.1 ID=prot_H-elongata_contig63840.13960.1|Name=mRNA_H-elongata_contig63840.13960.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=89bp
GQSFVVACAVLAHNVHELRSGRNSENHTFSAMLLLPFISTTLALLRFNWY
PARVFVGDTYCYFAGMTFAAVGIHGHFSKTLILMFMPQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000715Glycosyl_transferase_4
IPR033895GPT