prot_H-elongata_contig63826.13956.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig63826.13956.1
Unique Nameprot_H-elongata_contig63826.13956.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length111
Homology
BLAST of mRNA_H-elongata_contig63826.13956.1 vs. uniprot
Match: A0A6H5K638_9PHAE (Structural maintenance of chromosomes protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K638_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 1.300e-49
Identity = 92/100 (92.00%), Postives = 98/100 (98.00%), Query Frame = 0
Query:    9 VIENDKRKIKDVIDELDQKKNQALQSTWLKVNRDFGSIFSTLLPGTSAKLQPPEGESVLAGLEVKVAFGNVWKETLTELSGGQRSLLALSLILSLLLFKP 108
            VIENDK+KI+DVI ELDQKKNQ LQ+TWLKVNRDFGSIFSTLLPGTSAKLQPPEGE+V+AGLEVKVAFG+VWKETLTELSGGQRSLLALSLILSLLLFKP
Sbjct: 1022 VIENDKKKIQDVIGELDQKKNQTLQTTWLKVNRDFGSIFSTLLPGTSAKLQPPEGETVMAGLEVKVAFGSVWKETLTELSGGQRSLLALSLILSLLLFKP 1121          
BLAST of mRNA_H-elongata_contig63826.13956.1 vs. uniprot
Match: A0A7S2XXF5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXF5_9STRA)

HSP 1 Score: 162 bits (410), Expect = 1.920e-48
Identity = 85/101 (84.16%), Postives = 93/101 (92.08%), Query Frame = 0
Query:    8 QVIENDKRKIKDVIDELDQKKNQALQSTWLKVNRDFGSIFSTLLPGTSAKLQPPEGESVLAGLEVKVAFGNVWKETLTELSGGQRSLLALSLILSLLLFKP 108
            +VIENDK KI+ VI EL+ KKNQALQ+TW+KVNRDFGSIFSTLLPGTSAKL PPEG +VL GLEVKVAFG VWKE+LTELSGGQRSLLALSL+LSLLLFKP
Sbjct:    2 EVIENDKAKIQAVIQELEIKKNQALQTTWVKVNRDFGSIFSTLLPGTSAKLDPPEGGTVLDGLEVKVAFGKVWKESLTELSGGQRSLLALSLVLSLLLFKP 102          
BLAST of mRNA_H-elongata_contig63826.13956.1 vs. uniprot
Match: A0A7S3XPQ9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPQ9_HETAK)

HSP 1 Score: 166 bits (421), Expect = 5.170e-48
Identity = 87/101 (86.14%), Postives = 94/101 (93.07%), Query Frame = 0
Query:    8 QVIENDKRKIKDVIDELDQKKNQALQSTWLKVNRDFGSIFSTLLPGTSAKLQPPEGESVLAGLEVKVAFGNVWKETLTELSGGQRSLLALSLILSLLLFKP 108
            +VIENDKRKI+ VI +LD KKNQALQ+TW+KVNRDFGSIF TLLPGTSAKL PP+G SVL GLEVKVAFGNVWKE+LTELSGGQRSLLALSLILSLLLFKP
Sbjct:  177 EVIENDKRKIESVIADLDVKKNQALQTTWVKVNRDFGSIFGTLLPGTSAKLDPPQGGSVLDGLEVKVAFGNVWKESLTELSGGQRSLLALSLILSLLLFKP 277          
BLAST of mRNA_H-elongata_contig63826.13956.1 vs. uniprot
Match: A0A836CJV5_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJV5_9STRA)

HSP 1 Score: 162 bits (410), Expect = 9.990e-47
Identity = 86/100 (86.00%), Postives = 92/100 (92.00%), Query Frame = 0
Query:    9 VIENDKRKIKDVIDELDQKKNQALQSTWLKVNRDFGSIFSTLLPGTSAKLQPPEGESVLAGLEVKVAFGNVWKETLTELSGGQRSLLALSLILSLLLFKP 108
            VIE DK KI  VI ELDQKKNQALQ+TW+KVNRDFGSIFSTLLPGTSAKL+PPEG + L GLEVKVAFG+VWKE+LTELSGGQRSLLALSLILSLLLFKP
Sbjct:  151 VIEADKSKIHSVIAELDQKKNQALQTTWVKVNRDFGSIFSTLLPGTSAKLEPPEGGTALDGLEVKVAFGSVWKESLTELSGGQRSLLALSLILSLLLFKP 250          
BLAST of mRNA_H-elongata_contig63826.13956.1 vs. uniprot
Match: I3SJC5_LOTJA (SMC_N domain-containing protein n=2 Tax=NPAAA clade TaxID=2231382 RepID=I3SJC5_LOTJA)

HSP 1 Score: 151 bits (382), Expect = 1.990e-44
Identity = 79/109 (72.48%), Postives = 90/109 (82.57%), Query Frame = 0
Query:    3 LPGSAQVIENDKRKIKDVIDELDQKKNQALQSTWLKVNRDFGSIFSTLLPGTSAKLQPPEGESVLAGLEVKVAFGNVWKETLTELSGGQRSLLALSLILSLLLFKPGEI 111
            L     +IENDK KIK VI+ELD+KK + L  TW KVN DFGSIFSTLLPGT AKL+PPEG S L GLEVKVAFG+VWK++L+ELSGGQRSLLALSLIL+LLLFKP  +
Sbjct:   14 LMSKKNIIENDKSKIKKVIEELDEKKKETLNVTWTKVNSDFGSIFSTLLPGTMAKLEPPEGCSFLDGLEVKVAFGSVWKQSLSELSGGQRSLLALSLILALLLFKPAPL 122          
BLAST of mRNA_H-elongata_contig63826.13956.1 vs. uniprot
Match: A0A836CJQ0_9STRA (Structural maintenance of chromosomes protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJQ0_9STRA)

HSP 1 Score: 162 bits (410), Expect = 4.360e-44
Identity = 86/100 (86.00%), Postives = 92/100 (92.00%), Query Frame = 0
Query:    9 VIENDKRKIKDVIDELDQKKNQALQSTWLKVNRDFGSIFSTLLPGTSAKLQPPEGESVLAGLEVKVAFGNVWKETLTELSGGQRSLLALSLILSLLLFKP 108
            VIE DK KI  VI ELDQKKNQALQ+TW+KVNRDFGSIFSTLLPGTSAKL+PPEG + L GLEVKVAFG+VWKE+LTELSGGQRSLLALSLILSLLLFKP
Sbjct: 1029 VIEADKSKIHSVIAELDQKKNQALQTTWVKVNRDFGSIFSTLLPGTSAKLEPPEGGTALDGLEVKVAFGSVWKESLTELSGGQRSLLALSLILSLLLFKP 1128          
BLAST of mRNA_H-elongata_contig63826.13956.1 vs. uniprot
Match: A0A7S1H4H2_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H4H2_9STRA)

HSP 1 Score: 150 bits (380), Expect = 6.770e-44
Identity = 77/99 (77.78%), Postives = 88/99 (88.89%), Query Frame = 0
Query:   10 IENDKRKIKDVIDELDQKKNQALQSTWLKVNRDFGSIFSTLLPGTSAKLQPPEGESVLAGLEVKVAFGNVWKETLTELSGGQRSLLALSLILSLLLFKP 108
            +ENDK+KI+ VI+ELD KK   L+ TW+KVNRDFGS+FSTLLPGTSAKL+PPEG     GLEVKVAFGNVWKE+L+ELSGGQRSL+ALSLILSLLLFKP
Sbjct:    2 VENDKKKIQAVIEELDVKKKTELERTWVKVNRDFGSMFSTLLPGTSAKLEPPEGLEAWEGLEVKVAFGNVWKESLSELSGGQRSLIALSLILSLLLFKP 100          
BLAST of mRNA_H-elongata_contig63826.13956.1 vs. uniprot
Match: A0A7S3DSR2_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DSR2_9STRA)

HSP 1 Score: 152 bits (385), Expect = 8.180e-44
Identity = 79/101 (78.22%), Postives = 90/101 (89.11%), Query Frame = 0
Query:    8 QVIENDKRKIKDVIDELDQKKNQALQSTWLKVNRDFGSIFSTLLPGTSAKLQPPEGESVLAGLEVKVAFGNVWKETLTELSGGQRSLLALSLILSLLLFKP 108
            QV+ENDK+KI+ VI+ELD KK   ++STW KVN DFGSIFSTLLPGTSAKL+PPEG +   GLEVKVAFG+VWKE+L+ELSGGQRSLLALSLILSLLLFKP
Sbjct:   69 QVVENDKKKIQKVIEELDVKKKTEIESTWKKVNGDFGSIFSTLLPGTSAKLEPPEGMAAWEGLEVKVAFGDVWKESLSELSGGQRSLLALSLILSLLLFKP 169          
BLAST of mRNA_H-elongata_contig63826.13956.1 vs. uniprot
Match: F0ZEF6_DICPU (Structural maintenance of chromosomes protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZEF6_DICPU)

HSP 1 Score: 160 bits (405), Expect = 2.050e-43
Identity = 81/101 (80.20%), Postives = 96/101 (95.05%), Query Frame = 0
Query:    8 QVIENDKRKIKDVIDELDQKKNQALQSTWLKVNRDFGSIFSTLLPGTSAKLQPPEGESVLAGLEVKVAFGNVWKETLTELSGGQRSLLALSLILSLLLFKP 108
            ++IENDKRKI+ VI ELD+KKN++L+STW KVN+DFGSIFSTLLPGTSAKL+PPEG++ L GLEVKVAFG+VWKE+L+ELSGGQ+SLLALSLILSLLLFKP
Sbjct: 1004 KIIENDKRKIEQVIKELDEKKNESLRSTWKKVNKDFGSIFSTLLPGTSAKLEPPEGKTELDGLEVKVAFGDVWKESLSELSGGQKSLLALSLILSLLLFKP 1104          
BLAST of mRNA_H-elongata_contig63826.13956.1 vs. uniprot
Match: A0A097PJ81_SARHE (Structural maintenance of chromosomes protein 2 (Fragment) n=1 Tax=Saruma henryi TaxID=13258 RepID=A0A097PJ81_SARHE)

HSP 1 Score: 150 bits (380), Expect = 3.850e-43
Identity = 77/109 (70.64%), Postives = 92/109 (84.40%), Query Frame = 0
Query:    3 LPGSAQVIENDKRKIKDVIDELDQKKNQALQSTWLKVNRDFGSIFSTLLPGTSAKLQPPEGESVLAGLEVKVAFGNVWKETLTELSGGQRSLLALSLILSLLLFKPGEI 111
            L     +IENDK KIK VI+ELD+KK + L  TW+KVN+DFGSIFSTLLPGT AKL+PPEG + L GLEV+VAFG+VWK++L+ELSGGQRSLLALSLIL+LLLFKP  +
Sbjct:  118 LISKKSIIENDKSKIKKVIEELDEKKKETLSVTWVKVNKDFGSIFSTLLPGTMAKLEPPEGCTFLDGLEVRVAFGSVWKQSLSELSGGQRSLLALSLILALLLFKPAPL 226          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63826.13956.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K638_9PHAE1.300e-4992.00Structural maintenance of chromosomes protein n=1 ... [more]
A0A7S2XXF5_9STRA1.920e-4884.16Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XPQ9_HETAK5.170e-4886.14Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A836CJV5_9STRA9.990e-4786.00P-loop containing nucleoside triphosphate hydrolas... [more]
I3SJC5_LOTJA1.990e-4472.48SMC_N domain-containing protein n=2 Tax=NPAAA clad... [more]
A0A836CJQ0_9STRA4.360e-4486.00Structural maintenance of chromosomes protein n=1 ... [more]
A0A7S1H4H2_9STRA6.770e-4477.78Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A7S3DSR2_9STRA8.180e-4478.22Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
F0ZEF6_DICPU2.050e-4380.20Structural maintenance of chromosomes protein n=1 ... [more]
A0A097PJ81_SARHE3.850e-4370.64Structural maintenance of chromosomes protein 2 (F... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 7..34
NoneNo IPR availableGENE3D3.40.50.300coord: 24..111
e-value: 1.1E-17
score: 66.1
NoneNo IPR availablePANTHERPTHR43977FAMILY NOT NAMEDcoord: 6..108
NoneNo IPR availablePANTHERPTHR43977:SF2coord: 6..108
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 8..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig63826contigH-elongata_contig63826:2128..3172 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig63826.13956.1mRNA_H-elongata_contig63826.13956.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig63826 2128..3172 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig63826.13956.1 ID=prot_H-elongata_contig63826.13956.1|Name=mRNA_H-elongata_contig63826.13956.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=111bp
MALPGSAQVIENDKRKIKDVIDELDQKKNQALQSTWLKVNRDFGSIFSTL
LPGTSAKLQPPEGESVLAGLEVKVAFGNVWKETLTELSGGQRSLLALSLI
LSLLLFKPGEI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase