prot_H-elongata_contig63774.13949.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig63774.13949.1
Unique Nameprot_H-elongata_contig63774.13949.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length227
Homology
BLAST of mRNA_H-elongata_contig63774.13949.1 vs. uniprot
Match: D7FXR8_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR8_ECTSI)

HSP 1 Score: 312 bits (800), Expect = 2.770e-101
Identity = 152/232 (65.52%), Postives = 183/232 (78.88%), Query Frame = 0
Query:    1 MQGFTVEGKIGDGSDAD--AYINKCVYVEGEDSD----LDGFVMEGLLIQNCGGECVRLKNNVVNAEILENTIENCGIHDYEFESDDKNGEGIYIGTSSNQWVDEAPDTCIGNLVKGNIISTNGNECVDIKEGSTDNVVEENICTNQLDENSACYDVRGDDNTIRYNVATKCMGAGVRLGGWDVDGYAHGQGNHVYGNDFVDCGEGSIKVETEGQGDVCDNTCEDGNCELIG 226
            ++GFTVEGKIG  SD D  +++NKCVYVEG  S     LDGFVME +++QNCGGECVRLK++V+NA+++ NTI NCG+HDY F S DKNGEG+YIGTSS QW +   DTC  NLV GN IST+GNECVDIKEG++ NV+E+NIC+ QLD  S CYD RGD NT RYNV T CMGAGVRLGGW+VDG+ +G GN VYGNDF   GEG++KV    QGD+C NTCEDG+C L+G
Sbjct:  117 LKGFTVEGKIGT-SDTDEASWVNKCVYVEGPGSQSSAVLDGFVMEDMIVQNCGGECVRLKDSVINAQVMGNTISNCGVHDYMFNSGDKNGEGVYIGTSSTQWTN-GEDTCNDNLVSGNRISTSGNECVDIKEGASGNVIEDNICSEQLDAESGCYDSRGDGNTFRYNVGTDCMGAGVRLGGWEVDGHQYGVGNSVYGNDFNAVGEGALKVLVGEQGDICGNTCEDGSCSLVG 346          
BLAST of mRNA_H-elongata_contig63774.13949.1 vs. uniprot
Match: D7FXR9_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR9_ECTSI)

HSP 1 Score: 300 bits (769), Expect = 9.250e-99
Identity = 143/231 (61.90%), Postives = 181/231 (78.35%), Query Frame = 0
Query:    1 MQGFTVEGKIGDG-SDADAYINKCVYVEGEDSD----LDGFVMEGLLIQNCGGECVRLKNNVVNAEILENTIENCGIHDYEFESDDKNGEGIYIGTSSNQWVDEAPDTCIGNLVKGNIISTNGNECVDIKEGSTDNVVEENICTNQLDENSACYDVRGDDNTIRYNVATKCMGAGVRLGGWDVDGYAHGQGNHVYGNDFVDCGEGSIKVETEGQGDVCDNTCEDGNCELIG 226
            ++GF+VEGKIG   +D  +++NKCVYVEG  ++    LDGFVME +++QNCGGECVRLK++VVNA++  NTI NCG+HDY F S+DKNGEG+YIGTSS QW +   DTC GN+V  N+IST+GNECVDIKEGS+ NV+E+N C++QLD  S CYD RGD NT RYNV ++C GAGVRLGGW+VDG+ +G  N VYGNDF   G G++KV    QGD+C NTCE+G+C L G
Sbjct:  117 LKGFSVEGKIGSNDTDQASWVNKCVYVEGPGANSSAVLDGFVMEDMVVQNCGGECVRLKDSVVNAQVTGNTISNCGVHDYMFNSEDKNGEGVYIGTSSTQWTN-GEDTCNGNVVSRNLISTSGNECVDIKEGSSGNVIEDNFCSDQLDAESGCYDSRGDGNTFRYNVGSECTGAGVRLGGWEVDGHQYGVNNSVYGNDFYAVGVGALKVLVGEQGDICGNTCEEGSCSLTG 346          
BLAST of mRNA_H-elongata_contig63774.13949.1 vs. uniprot
Match: D7FZD2_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZD2_ECTSI)

HSP 1 Score: 286 bits (732), Expect = 3.590e-91
Identity = 134/230 (58.26%), Postives = 170/230 (73.91%), Query Frame = 0
Query:    1 MQGFTVEGKIGDGSDADAYINKCVYVEGEDSD----LDGFVMEGLLIQNCGGECVRLKNNVVNAEILENTIENCGIHDYEFESDDKNGEGIYIGTSSNQWVDEAPDTCIGNLVKGNIISTNGNECVDIKEGSTDNVVEENICTNQLDENSACYDVRGDDNTIRYNVATKCMGAGVRLGGWDVDGYAHGQGNHVYGNDFVDCGEGSIKVETEGQGDVCDNTCEDGNCELIG 226
            ++GFTVEG+IG     D+Y+  C+YV+G  SD    LDGFVME + +QNCGGECVRLK+ V NA+I  NTI NCGIHDY FES D NG+G+ IGTSS++W D   D C  NLV GN+I T+ NECVD+KEG+  NV+E+N+C NQLD NS CY+ RG+DN  R N  + C+GAGVRLGGW+VDG+ +G GN VY NDF D G G++K+  +GQG +C NTC   +C+LIG
Sbjct:   79 LKGFTVEGQIGTEVTEDSYVLNCIYVQGPGSDSSTFLDGFVMEEMAVQNCGGECVRLKDGVTNAKIFSNTITNCGIHDYMFESGDMNGQGVCIGTSSDEWPDGEEDVCTNNLVAGNVIDTSANECVDVKEGAYGNVIEDNMCYNQLDINSGCYNSRGNDNIFRNNAGSDCLGAGVRLGGWEVDGFQYGVGNSVYDNDFNDVGFGALKIMVDGQGTICGNTCAGDDCQLIG 308          
BLAST of mRNA_H-elongata_contig63774.13949.1 vs. uniprot
Match: A0A6H5KT05_9PHAE (Beta_helix domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KT05_9PHAE)

HSP 1 Score: 249 bits (635), Expect = 3.960e-79
Identity = 117/224 (52.23%), Postives = 157/224 (70.09%), Query Frame = 0
Query:    1 MQGFTVEGKIGDGSDADAYINKCVYVEGE----DSDLDGFVMEGLLIQNCGGECVRLKNNVVNAEILENTIENCGIHDYEFESDDKNGEGIYIGTSSNQWVDEAPDTCIGNLVKGNIISTNGNECVDIKEGSTDNVVEENICTNQLDENSACYDVRGDDNTIRYNVATKCMGAGVRLGGWDVDGYAHGQGNHVYGNDFVDCGEGSIKVETEGQGDVCDNTCEDG 220
            ++GF+V+GKI D  +A++Y++KCV+VEG     D  L+GFVM+ + +QNCG ECVRLK+ +V A I +N I++CG+ D+ + +  KNGEGIY+GTSS QW D  PD C  N + GN I+ NGNECVDIKEGST  +VEEN C+ QLDE+S C+  RGD N  RYN A+ C+G GVR+GGW+VDG+ +GQ N +Y N F     G +      QG VC N+C+ G
Sbjct:   91 LEGFSVDGKISDDDEAESYVDKCVFVEGTSTSGDERLEGFVMQDVYVQNCGDECVRLKSFIVGAVISDNVIQDCGVRDFVYGNSGKNGEGIYVGTSSTQWSD-GPDECNDNTITGNTITPNGNECVDIKEGSTGTIVEENTCSGQLDEDSGCFGSRGDGNVFRYNTASDCLGVGVRIGGWEVDGHKYGQDNSIYENSFTRAESGGLSFFALPQGKVCGNSCQGG 313          
BLAST of mRNA_H-elongata_contig63774.13949.1 vs. uniprot
Match: A0A6H5K1D2_9PHAE (Beta_helix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D2_9PHAE)

HSP 1 Score: 245 bits (625), Expect = 3.060e-75
Identity = 123/242 (50.83%), Postives = 162/242 (66.94%), Query Frame = 0
Query:    1 MQGFTVEGKIGDGSDADAYINKCVYVEGE-------------DSDLDGFVMEGLLIQNCGGECVRLKNNVVNAEILENTIENCGIHDYEFESDDKNGEGIYIGTSSNQWVD-------EAPDTCIGNLVKGNIISTNGNECVDIKEGSTDNVVEENICTNQLDENSACYDVRGDDNTIRYNVATKCMGAGVRLGGWDVDGYAHGQGNHVYGNDFVDCGEGSIKVETEGQGDVCDNTCEDGNC 222
            ++GFT++G++ D    ++Y++KC++VEG+             +S L G V++GL IQNCG EC+R++N V NA I  N IENCGI+D+ F+ D K GE IYIGTSSNQW D         PD    NLV GN +   GNECVDIKEG+T NVVE N C +Q D  S CYD RG++NT RYN A +C+GAG+RLGG  +DG+ +G  NHVYGN+F++   GSIK   E QG +CDN+C +G C
Sbjct:  117 LEGFTIDGQLDDEDVEESYVDKCIFVEGQAAPTMLTHQGQEVESALIGTVIDGLKIQNCGMECIRMRNFVTNAVIQNNDIENCGIYDFRFQFDGKIGEAIYIGTSSNQWEDGTGDRVTNGPDGSNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNECEDQRDAESGCYDSRGNENTFRYNTAVQCLGAGIRLGGHTIDGFVYGVDNHVYGNEFLETEAGSIKSRVEPQGVICDNSCANGEC 358          
BLAST of mRNA_H-elongata_contig63774.13949.1 vs. uniprot
Match: D8LJ42_ECTSI (FirrV-1-B30 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ42_ECTSI)

HSP 1 Score: 249 bits (636), Expect = 3.360e-75
Identity = 123/244 (50.41%), Postives = 165/244 (67.62%), Query Frame = 0
Query:    1 MQGFTVEGKIGDGSDADAYINKCVYVEG----EDSDLDG---------FVMEGLLIQNCGGECVRLKNNVVNAEILENTIENCGIHDYEFESDDKNGEGIYIGTSSNQWVDEA-------PDTCIGNLVKGNIISTNGNECVDIKEGSTDNVVEENICTNQLDENSACYDVRGDDNTIRYNVATKCMGAGVRLGGWDVDGYAHGQGNHVYGNDFVDCGEGSIKVETEGQGDVCDNTCEDGNCEL 224
            ++GFT++G+I D    D++++KC++VEG    ED + DG          V++ + IQNCG EC+R++N V N  I++N IE+CGI+DY +  D K GE IYIGTSSNQW D A       PD C  NLV GN +   GNECVDIKEG+T NVVE N C +Q D  S CYD RG++NT RYN A  C+G G+RLGG ++DG  +G  NHVYGN F + G+GSIK   + QG +C+N+CEDG+C++
Sbjct:  163 LRGFTIDGQIDDADHEDSFVDKCIFVEGQAAPEDVEYDGRTVETALIGTVIDSMKIQNCGMECIRMRNFVTNTVIIDNDIEDCGIYDYRYTFDGKVGEAIYIGTSSNQWADGADGRVTNGPDGCNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNDCEDQRDVESGCYDSRGNENTFRYNTAENCLGGGIRLGGHEIDGITYGVDNHVYGNSFRETGDGSIKARRDPQGVICENSCEDGDCDV 406          
BLAST of mRNA_H-elongata_contig63774.13949.1 vs. uniprot
Match: D8LJ29_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ29_ECTSI)

HSP 1 Score: 224 bits (572), Expect = 9.130e-70
Identity = 113/200 (56.50%), Postives = 138/200 (69.00%), Query Frame = 0
Query:   30 DSDLDGFVMEGLLIQNCGGECVRLKNNVVNAEILENTIENCGIHDYEFESDDKNGEGIYIGTSSNQWVD-------EAPDTCIGNLVKGNIISTNGNECVDIKEGSTDNVVEENICTNQLDENSACYDVRGDDNTIRYNVATKCMGAGVRLGGWDVDGYAHGQGNHVYGNDFVDCGEGSIKVETEGQGDVCDNTCEDGNC 222
            +S L G V++GL IQNCG EC+R++N V NA I  N IENCGI+D+ F+ D K GE IYIGTSSNQW D         PD    NLV GN +   GNECVDIKEG+T NVVE N C +Q D  S CYD RG++NT RYN A +C+GAG+RLGG  +DG+ +G  NHVYGN+F++   GSIK   E QG +CDN+C DG C
Sbjct:   10 ESALIGTVIDGLKIQNCGMECIRMRNFVTNAVIQNNDIENCGIYDFRFQFDGKIGEAIYIGTSSNQWEDGTGDRVTNGPDGSNYNLVTGNELVPRGNECVDIKEGATMNVVEYNECEDQRDAESGCYDSRGNENTFRYNTAIQCLGAGIRLGGHTIDGFVYGVDNHVYGNEFLETEAGSIKSRVEPQGVICDNSCADGEC 209          
BLAST of mRNA_H-elongata_contig63774.13949.1 vs. uniprot
Match: A0A6H5LEX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEX7_9PHAE)

HSP 1 Score: 210 bits (534), Expect = 1.980e-62
Identity = 107/165 (64.85%), Postives = 129/165 (78.18%), Query Frame = 0
Query:    1 MQGFTVEGKIGDGSDAD--AYINKCVYVEGEDSD----LDGFVMEGLLIQNCGGECVRLKNNVVNAEILENTIENCGIHDYEFESDDKNGEGIYIGTSSNQWVDEAPDTCIGNLVKGNIISTNGNECVDIKEGSTDNVVEENICTNQLDENSACYDVRGDDNTIR 159
            ++GFTVEGK+G  SD D  +++NKCVYVEG  S     LDGFVME +++QNCGGECVRLK++VVNA++  NTI NCG+HD+ F S DKNGEG+YIGTSS QW +   DTC  NLV GN IST+GNECVDIKEG++ NVVE NIC++QLD  S CYD RGD NT R
Sbjct:  117 LKGFTVEGKVGT-SDTDEASWVNKCVYVEGPGSQSSAVLDGFVMEDMIVQNCGGECVRLKDSVVNAQVTGNTISNCGVHDFMFNSGDKNGEGVYIGTSSTQWTN-GEDTCNDNLVFGNRISTSGNECVDIKEGASGNVVENNICSDQLDAESGCYDSRGDGNTFR 279          
BLAST of mRNA_H-elongata_contig63774.13949.1 vs. uniprot
Match: Q6XM06_9PHYC (FirrV-1-B30 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM06_9PHYC)

HSP 1 Score: 208 bits (529), Expect = 9.230e-60
Identity = 109/244 (44.67%), Postives = 146/244 (59.84%), Query Frame = 0
Query:    1 MQGFTVEGKIGDGSDADAYINKCVYVEG-------------EDSDLDGFVMEGLLIQNCGGECVRLKNNVVNAEILENTIENCGIHDYEFESDDKNGEGIYIGTSSNQWVD-----EAPDTCIGNLVKGNIISTNGNECVDIKEGSTDNVVEENICTNQLDENSACYDVRGDDNTIRYNVATKCMGAGVRLGGWDVDGYAHGQGNHVYGNDFVDCGEGSIKVETEGQGDVCDNTCEDGNCELIG 226
            ++GFTV GK   G+D   Y++KC++V G              +S + G ++E + +++CGGEC+RL++ V +AE+  N IE CG HDY F+   KNGE IY+GTSSNQW D       PD      +  N+I T  NECVD+KEGSTD +VE N C+NQLD NSA +D R DD T RYN  + C GAG+R+GG  +DG  +G+ N  YGN   +    +IKVET  Q   C N C    C + G
Sbjct:  114 LRGFTVSGKRNSGNDPSDYVDKCIFVMGISSPEIERTSGIEYESSITGVIIEDMEVEDCGGECIRLRSFVTHAEVTGNRIERCGRHDYLFDGAGKNGEAIYVGTSSNQWNDGKNSKSGPDKTKYIWIHDNVIDTQANECVDVKEGSTDVLVEYNACSNQLDTNSAGFDSRTDDVTFRYNEVSNCAGAGIRIGGHKIDGKTYGENNEAYGNVMRNNAYSAIKVETGKQHVFCQNDCGKEGCTVKG 357          
BLAST of mRNA_H-elongata_contig63774.13949.1 vs. uniprot
Match: UPI00036AEC55 (right-handed parallel beta-helix repeat-containing protein n=1 Tax=Hahella ganghwensis TaxID=286420 RepID=UPI00036AEC55)

HSP 1 Score: 193 bits (491), Expect = 7.740e-57
Identity = 105/226 (46.46%), Postives = 139/226 (61.50%), Query Frame = 0
Query:    1 MQGFTVEGKIGDGSDADAYINKCVYVEGEDSDLD--GFVMEGLLIQNCGGECVRLKNNVVNAEILENTIENCGIHDYEFESDDKNGEGIYIGTSSNQWVDE-----APDTCIGNLVKGNIISTNGNECVDIKEGSTDNVVEENICTNQLDENSACYDVRGDDNTIRYNVATKCMGAGVRLGGWDVDGYAHGQGNHVYGNDFVDCGEGSIKVETEGQGDVCDNTCED 219
            ++ FT++G++G G+  + + +  VYV+G +      GFVM  + ++N GGECVRL+  V  AEI +NT  NCG++D++F +  KNGE IY+GTSSNQW D       PD    N +  N   TNGNECVDIKEG+  N+VE NIC+ Q D NSA +D RGD N  RYNV+    GAGVRLGG  VDG  +G  N VYGN   +  +  +K+    Q  VC N   D
Sbjct:  122 LRNFTIDGQVGSGNTMEDFRDILVYVKGNEPQQGPTGFVMRAMSLKNAGGECVRLRYYVTEAEIFDNTFYNCGVYDFKFNNGGKNGEAIYVGTSSNQWDDGKNPTGGPDPSNHNWIHHNKFLTNGNECVDIKEGAEYNLVEYNICSGQQDPNSAGFDSRGDHNIFRYNVSHDNKGAGVRLGGNTVDGRQYGVNNQVYGNLLYNNAQAGVKLMAAPQEKVCGNPTSD 347          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63774.13949.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXR8_ECTSI2.770e-10165.52FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D7FXR9_ECTSI9.250e-9961.90FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D7FZD2_ECTSI3.590e-9158.26FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5KT05_9PHAE3.960e-7952.23Beta_helix domain-containing protein n=2 Tax=Ectoc... [more]
A0A6H5K1D2_9PHAE3.060e-7550.83Beta_helix domain-containing protein n=1 Tax=Ectoc... [more]
D8LJ42_ECTSI3.360e-7550.41FirrV-1-B30 n=2 Tax=Ectocarpus siliculosus TaxID=2... [more]
D8LJ29_ECTSI9.130e-7056.50FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5LEX7_9PHAE1.980e-6264.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
Q6XM06_9PHYC9.230e-6044.67FirrV-1-B30 n=1 Tax=Feldmannia irregularis virus a... [more]
UPI00036AEC557.740e-5746.46right-handed parallel beta-helix repeat-containing... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 153..175
e-value: 27.0
score: 13.7
coord: 33..55
e-value: 1300.0
score: 6.5
coord: 104..126
e-value: 42.0
score: 13.0
coord: 57..91
e-value: 87.0
score: 12.0
coord: 184..206
e-value: 530.0
score: 9.2
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..221
e-value: 2.9E-17
score: 64.7
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 31..208
e-value: 7.7E-8
score: 32.3
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 4..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig63774contigH-elongata_contig63774:724..2986 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig63774.13949.1mRNA_H-elongata_contig63774.13949.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig63774 724..2986 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig63774.13949.1 ID=prot_H-elongata_contig63774.13949.1|Name=mRNA_H-elongata_contig63774.13949.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=227bp
MQGFTVEGKIGDGSDADAYINKCVYVEGEDSDLDGFVMEGLLIQNCGGEC
VRLKNNVVNAEILENTIENCGIHDYEFESDDKNGEGIYIGTSSNQWVDEA
PDTCIGNLVKGNIISTNGNECVDIKEGSTDNVVEENICTNQLDENSACYD
VRGDDNTIRYNVATKCMGAGVRLGGWDVDGYAHGQGNHVYGNDFVDCGEG
SIKVETEGQGDVCDNTCEDGNCELIG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR012334Pectin_lyas_fold
IPR039448Beta_helix
IPR011050Pectin_lyase_fold/virulence