prot_H-elongata_contig63710.13942.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig63710.13942.1
Unique Nameprot_H-elongata_contig63710.13942.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length130
Homology
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BLAST of mRNA_H-elongata_contig63710.13942.1 vs. uniprot
Match: D7FSD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSD6_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 1.250e-23
Identity = 60/132 (45.45%), Postives = 82/132 (62.12%), Query Frame = 0 
Query:    1 QVELEGSDQSEN--IDCVTVGIDDLVRVMPWFCIEVGDIVEIQVEALAGWIRGTVIRIDPAAMTYDVEVDLGTTDGICDTPESNEEKCRKIRCNDGGKEKRSSSTSVVYQVTDDRIRKICSGRQAIARQWKK 130
            +VEL G D+ E   +  +TVGIDD+VRVMPWFCIEVGD+VE Q+E    W+RGTV+ I      YDV ++    DG  D  E+  E        D  K++  +S + +Y+V +  IRK+ SGRQA A++WKK
Sbjct:  248 EVELSGDDEDEEGCVQHITVGIDDVVRVMPWFCIEVGDMVECQLEGTMIWLRGTVVNIHLEQALYDVALE-SCEDGQADGRETYGENDVAGGGGDCEKKQGEASPNTMYRVPESSIRKVVSGRQAAAKRWKK 378
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BLAST of mRNA_H-elongata_contig63710.13942.1 vs. uniprot
Match: A0A6H5JS13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS13_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 1.030e-21
Identity = 58/135 (42.96%), Postives = 81/135 (60.00%), Query Frame = 0 
Query:    1 QVELEGSDQSEN--IDCVTVGIDDLVRVMPWFCIE---VGDIVEIQVEALAGWIRGTVIRIDPAAMTYDVEVDLGTTDGICDTPESNEEKCRKIRCNDGGKEKRSSSTSVVYQVTDDRIRKICSGRQAIARQWKK 130
            +VEL G D+ E   +  +TVGIDD+VRVMPWFCIE   VGD+VE Q+E    W+RGTV+ +      YDV ++    DG  D   +  E        D  K++  +S + +Y+V +  IRK+ SGRQA A++WKK
Sbjct:  266 EVELGGDDEDEEGGVQYITVGIDDVVRVMPWFCIEASLVGDMVECQLEGTMMWLRGTVVNVHLEQAVYDVALEPECEDGQDDGLATFGENAVAGGGEDCDKKQGEASPNTMYRVPESSIRKVVSGRQAAAKRWKK 400
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63710.13942.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FSD6_ECTSI1.250e-2345.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JS13_9PHAE1.030e-2142.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig63710contigH-elongata_contig63710:96..3326 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig63710.13942.1mRNA_H-elongata_contig63710.13942.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig63710 96..3326 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig63710.13942.1 ID=prot_H-elongata_contig63710.13942.1|Name=mRNA_H-elongata_contig63710.13942.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=130bp
QVELEGSDQSENIDCVTVGIDDLVRVMPWFCIEVGDIVEIQVEALAGWIR
GTVIRIDPAAMTYDVEVDLGTTDGICDTPESNEEKCRKIRCNDGGKEKRS
SSTSVVYQVTDDRIRKICSGRQAIARQWKK
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