prot_H-elongata_contig63443.13920.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig63443.13920.1
Unique Nameprot_H-elongata_contig63443.13920.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length37
Homology
BLAST of mRNA_H-elongata_contig63443.13920.1 vs. uniprot
Match: D8LHZ3_ECTSI (Actin-related protein 2/3 complex subunit 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHZ3_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 1.210e-16
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 0
Query:    1 RYAVWFGGSLVASGPDFQRVCCTKAQYDEEGPRIAR 36
            RYAVWFGGSLVASGP+F RVCCTKAQYDEEGPRIAR
Sbjct:  357 RYAVWFGGSLVASGPEFYRVCCTKAQYDEEGPRIAR 392          
BLAST of mRNA_H-elongata_contig63443.13920.1 vs. uniprot
Match: A0A2P4XKK6_9STRA (Actin-like protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A2P4XKK6_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 1.190e-15
Identity = 31/36 (86.11%), Postives = 33/36 (91.67%), Query Frame = 0
Query:    1 RYAVWFGGSLVASGPDFQRVCCTKAQYDEEGPRIAR 36
            R+AVWFGGS+VAS PDF RVC TKAQYDEEGPRIAR
Sbjct:   24 RFAVWFGGSMVASTPDFYRVCHTKAQYDEEGPRIAR 59          
BLAST of mRNA_H-elongata_contig63443.13920.1 vs. uniprot
Match: M4BH03_HYAAE (Uncharacterized protein n=28 Tax=Oomycota TaxID=4762 RepID=M4BH03_HYAAE)

HSP 1 Score: 71.6 bits (174), Expect = 1.310e-13
Identity = 31/36 (86.11%), Postives = 33/36 (91.67%), Query Frame = 0
Query:    1 RYAVWFGGSLVASGPDFQRVCCTKAQYDEEGPRIAR 36
            R+AVWFGGS+VAS PDF RVC TKAQYDEEGPRIAR
Sbjct:  356 RFAVWFGGSMVASTPDFYRVCHTKAQYDEEGPRIAR 391          
BLAST of mRNA_H-elongata_contig63443.13920.1 vs. uniprot
Match: W2PQK8_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2PQK8_PHYPN)

HSP 1 Score: 70.1 bits (170), Expect = 2.450e-13
Identity = 30/36 (83.33%), Postives = 33/36 (91.67%), Query Frame = 0
Query:    1 RYAVWFGGSLVASGPDFQRVCCTKAQYDEEGPRIAR 36
            R+AVWFGGS+VAS PDF RVC TKAQY+EEGPRIAR
Sbjct:  228 RFAVWFGGSMVASTPDFYRVCHTKAQYEEEGPRIAR 263          
BLAST of mRNA_H-elongata_contig63443.13920.1 vs. uniprot
Match: A0A835YZY0_9STRA (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZY0_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 2.550e-13
Identity = 29/36 (80.56%), Postives = 32/36 (88.89%), Query Frame = 0
Query:    1 RYAVWFGGSLVASGPDFQRVCCTKAQYDEEGPRIAR 36
            RYAVWFGG+L+AS P+F   CCTKAQYDEEGPRIAR
Sbjct:  377 RYAVWFGGALLASTPEFYSACCTKAQYDEEGPRIAR 412          
BLAST of mRNA_H-elongata_contig63443.13920.1 vs. uniprot
Match: W4G9M2_9STRA (Uncharacterized protein n=11 Tax=Saprolegniaceae TaxID=4764 RepID=W4G9M2_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 3.500e-13
Identity = 30/36 (83.33%), Postives = 33/36 (91.67%), Query Frame = 0
Query:    1 RYAVWFGGSLVASGPDFQRVCCTKAQYDEEGPRIAR 36
            R+AVWFGGS+VAS P+F RVC TKAQYDEEGPRIAR
Sbjct:  381 RFAVWFGGSMVASTPEFHRVCHTKAQYDEEGPRIAR 416          
BLAST of mRNA_H-elongata_contig63443.13920.1 vs. uniprot
Match: A0A3R6VAF7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6VAF7_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 3.600e-13
Identity = 30/36 (83.33%), Postives = 33/36 (91.67%), Query Frame = 0
Query:    1 RYAVWFGGSLVASGPDFQRVCCTKAQYDEEGPRIAR 36
            R+AVWFGGS+VAS P+F RVC TKAQYDEEGPRIAR
Sbjct:  598 RFAVWFGGSMVASTPEFHRVCHTKAQYDEEGPRIAR 633          
BLAST of mRNA_H-elongata_contig63443.13920.1 vs. uniprot
Match: A0A2D4C2X1_PYTIN (Actin-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C2X1_PYTIN)

HSP 1 Score: 70.1 bits (170), Expect = 4.900e-13
Identity = 30/36 (83.33%), Postives = 33/36 (91.67%), Query Frame = 0
Query:    1 RYAVWFGGSLVASGPDFQRVCCTKAQYDEEGPRIAR 36
            R+AVWFGGS+VAS P+F RVC TKAQYDEEGPRIAR
Sbjct:  377 RFAVWFGGSMVASTPEFYRVCHTKAQYDEEGPRIAR 412          
BLAST of mRNA_H-elongata_contig63443.13920.1 vs. uniprot
Match: A0A067BG63_SAPPC (Uncharacterized protein n=4 Tax=Saprolegnia TaxID=4769 RepID=A0A067BG63_SAPPC)

HSP 1 Score: 68.9 bits (167), Expect = 1.250e-12
Identity = 29/36 (80.56%), Postives = 33/36 (91.67%), Query Frame = 0
Query:    1 RYAVWFGGSLVASGPDFQRVCCTKAQYDEEGPRIAR 36
            R+AVWFGGS+VAS P+F RVC TKAQY+EEGPRIAR
Sbjct:  628 RFAVWFGGSMVASTPEFHRVCHTKAQYEEEGPRIAR 663          
BLAST of mRNA_H-elongata_contig63443.13920.1 vs. uniprot
Match: F0WBI4_9STRA (Actinlike protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WBI4_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 3.130e-12
Identity = 29/36 (80.56%), Postives = 32/36 (88.89%), Query Frame = 0
Query:    1 RYAVWFGGSLVASGPDFQRVCCTKAQYDEEGPRIAR 36
            RYAVWFGGS+VAS P F +VC TKAQY+EEGPRIAR
Sbjct:  369 RYAVWFGGSMVASTPGFYKVCHTKAQYEEEGPRIAR 404          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63443.13920.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHZ3_ECTSI1.210e-1694.44Actin-related protein 2/3 complex subunit 3 n=2 Ta... [more]
A0A2P4XKK6_9STRA1.190e-1586.11Actin-like protein n=4 Tax=Peronosporaceae TaxID=4... [more]
M4BH03_HYAAE1.310e-1386.11Uncharacterized protein n=28 Tax=Oomycota TaxID=47... [more]
W2PQK8_PHYPN2.450e-1383.33Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
A0A835YZY0_9STRA2.550e-1380.56Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
W4G9M2_9STRA3.500e-1383.33Uncharacterized protein n=11 Tax=Saprolegniaceae T... [more]
A0A3R6VAF7_9STRA3.600e-1383.33Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A2D4C2X1_PYTIN4.900e-1383.33Actin-like protein n=1 Tax=Pythium insidiosum TaxI... [more]
A0A067BG63_SAPPC1.250e-1280.56Uncharacterized protein n=4 Tax=Saprolegnia TaxID=... [more]
F0WBI4_9STRA3.130e-1280.56Actinlike protein putative n=1 Tax=Albugo laibachi... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.420.40coord: 4..34
e-value: 1.1E-9
score: 39.4
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 1..35
IPR004000Actin familyPFAMPF00022Actincoord: 1..35
e-value: 3.3E-8
score: 32.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig63443contigH-elongata_contig63443:1933..2043 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig63443.13920.1mRNA_H-elongata_contig63443.13920.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig63443 1933..2043 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig63443.13920.1 ID=prot_H-elongata_contig63443.13920.1|Name=mRNA_H-elongata_contig63443.13920.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=37bp
RYAVWFGGSLVASGPDFQRVCCTKAQYDEEGPRIAR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004000Actin