prot_H-elongata_contig6344.13919.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6344.13919.1
Unique Nameprot_H-elongata_contig6344.13919.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length214
Homology
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BLAST of mRNA_H-elongata_contig6344.13919.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 8.810e-18
Identity = 83/217 (38.25%), Postives = 106/217 (48.85%), Query Frame = 0 
Query:    1 MTELLDIMGSGSLRIRTPDKP-QVDPVPYDDIETSDLYYEVQTAVDVCVEYMGKKNLGEVGNPVERIRTLLDPRRKTVSKQECVNGSPDVKQLAIDELNNVADLFDGSEPQKTTVPAASXXXXXXXXXXXXXXXXGGDGVTEPLAKKPRVLSVIEQRRVNRLAT--AGSAGVAGDEVESGSGPSITHKVSVLQELTRYVAEGVELEEEGFSLPGFWR 214
            M E+ +I      +IR PD+P   D V  + I+  DL  E     +V +  M KK LG    P+ERI  LLDPRRK  S +  VNGS D+K  AI ++ +VA  F            A         XXXXXXXX      +P  KK +VLS +E+RR+ RLA   A SAG A     S    +      V +EL  Y+AE    EE  FSL  FW+
Sbjct:  193 MREIREIFSGDVYKIRVPDQPYNDDSVLKEKIQVDDLMTETCKVREVVLSRMEKKELGAARMPLERICALLDPRRKDCSDEHLVNGSADLKASAIADVKSVAKTF------------AEADLGSASSXXXXXXXXXXXXXNQPAPKKQKVLSDLEERRLQRLAKSKAASAGRAAPAAVS----TARRGAIVERELRMYLAEDPAEEEYDFSLLEFWQ 393
[Close]
BLAST of mRNA_H-elongata_contig6344.13919.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 1.100e-17
Identity = 83/217 (38.25%), Postives = 106/217 (48.85%), Query Frame = 0 
Query:    1 MTELLDIMGSGSLRIRTPDKP-QVDPVPYDDIETSDLYYEVQTAVDVCVEYMGKKNLGEVGNPVERIRTLLDPRRKTVSKQECVNGSPDVKQLAIDELNNVADLFDGSEPQKTTVPAASXXXXXXXXXXXXXXXXGGDGVTEPLAKKPRVLSVIEQRRVNRLAT--AGSAGVAGDEVESGSGPSITHKVSVLQELTRYVAEGVELEEEGFSLPGFWR 214
            M E+ +I      +IR PD+P   D V  + I+  DL  E     +V +  M KK LG    P+ERI  LLDPRRK  S +  VNGS D+K  AI ++ +VA  F            A         XXXXXXXX      +P  KK +VLS +E+RR+ RLA   A SAG A     S    +      V +EL  Y+AE    EE  FSL  FW+
Sbjct:  521 MREIREIFSGDVYKIRVPDQPYNDDSVLKEKIQVDDLMTETCKVREVVLSRMEKKELGAARMPLERICALLDPRRKDCSDEHLVNGSADLKASAIADVKSVAKTF------------AEADLGSASSXXXXXXXXXXXXXNQPAPKKQKVLSDLEERRLQRLAKSKAASAGRAAPAAVS----TARRGAIVERELRMYLAEDPAEEEYDFSLLEFWQ 721
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6344.13919.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KAN7_9PHAE8.810e-1838.25Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KJ52_9PHAE1.100e-1738.25Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6344contigH-elongata_contig6344:8782..9423 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6344.13919.1mRNA_H-elongata_contig6344.13919.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6344 8782..10296 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6344.13919.1 ID=prot_H-elongata_contig6344.13919.1|Name=mRNA_H-elongata_contig6344.13919.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=214bp
MTELLDIMGSGSLRIRTPDKPQVDPVPYDDIETSDLYYEVQTAVDVCVEY
MGKKNLGEVGNPVERIRTLLDPRRKTVSKQECVNGSPDVKQLAIDELNNV
ADLFDGSEPQKTTVPAASASAPAPAPASALAPAPGGDGVTEPLAKKPRVL
SVIEQRRVNRLATAGSAGVAGDEVESGSGPSITHKVSVLQELTRYVAEGV
ELEEEGFSLPGFWR
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