prot_H-elongata_contig63314.13907.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig63314.13907.1
Unique Nameprot_H-elongata_contig63314.13907.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length76
Homology
BLAST of mRNA_H-elongata_contig63314.13907.1 vs. uniprot
Match: D7G0Y5_ECTSI (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0Y5_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 3.480e-39
Identity = 63/75 (84.00%), Postives = 71/75 (94.67%), Query Frame = 0
Query:    1 MKEGLLSMVRNEDKQGDSRFFISIKDDAGWADNRYVAFGRVAEGMDVIHQIEKVKVEGGTNRPKKPVVVDNCGLL 75
            MKEGLLSMVRN D QGDSRFFISIKDDAGWAD+RYVAFGR+AEGMDV+H IE+VKVEGGTN+PKKPVV++ CG+L
Sbjct:  190 MKEGLLSMVRNADAQGDSRFFISIKDDAGWADDRYVAFGRIAEGMDVVHLIERVKVEGGTNKPKKPVVIEKCGML 264          
BLAST of mRNA_H-elongata_contig63314.13907.1 vs. uniprot
Match: A0A835YNC6_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNC6_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 3.490e-24
Identity = 44/73 (60.27%), Postives = 58/73 (79.45%), Query Frame = 0
Query:    3 EGLLSMVRNEDKQGDSRFFISIKDDAGWADNRYVAFGRVAEGMDVIHQIEKVKVEGGTNRPKKPVVVDNCGLL 75
            EG++SMVR  D + DSRFFI+IK DAGWAD RYVAFGRV EG+D +  I+++KV+  +NRP KPVV++ C +L
Sbjct:  112 EGMVSMVRGPDTKNDSRFFITIKPDAGWADGRYVAFGRVLEGLDALRGIDQLKVQTPSNRPLKPVVIEECVML 184          
BLAST of mRNA_H-elongata_contig63314.13907.1 vs. uniprot
Match: A0A6V1WNP3_HETAK (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WNP3_HETAK)

HSP 1 Score: 87.4 bits (215), Expect = 1.840e-19
Identity = 39/72 (54.17%), Postives = 52/72 (72.22%), Query Frame = 0
Query:    4 GLLSMVRNEDKQGDSRFFISIKDDAGWADNRYVAFGRVAEGMDVIHQIEKVKVEGGTNRPKKPVVVDNCGLL 75
            GL+SM R  D + DSRFFI  + DAGWAD +YVAFG+V EG  V+ +IEK+K +   N P K VV+++CG+L
Sbjct:  160 GLVSMARGLDGKTDSRFFIQTQGDAGWADGKYVAFGKVTEGFTVVQEIEKLKTQPPQNNPTKKVVIEDCGVL 231          
BLAST of mRNA_H-elongata_contig63314.13907.1 vs. uniprot
Match: A0A6V2NXR4_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2NXR4_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 3.780e-19
Identity = 41/74 (55.41%), Postives = 52/74 (70.27%), Query Frame = 0
Query:    2 KEGLLSMVRNEDKQGDSRFFISIKDDAGWADNRYVAFGRVAEGMDVIHQIEKVKVEGGTNRPKKPVVVDNCGLL 75
            K+GL+SMVR+     DSRFFI+  DDAGWAD++Y AFG V +GMD + +IEKV V    N PK PV +  CG+L
Sbjct:  157 KKGLVSMVRSLSGGVDSRFFINCNDDAGWADDKYAAFGIVEDGMDYVKKIEKVSVSPPKNSPKTPVTIIGCGVL 230          
BLAST of mRNA_H-elongata_contig63314.13907.1 vs. uniprot
Match: A0A7S4MQY5_9STRA (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MQY5_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 4.250e-19
Identity = 42/74 (56.76%), Postives = 53/74 (71.62%), Query Frame = 0
Query:    2 KEGLLSMVRNEDKQGDSRFFISIKDDAGWADNRYVAFGRVAEGMDVIHQIEKVKVEGGTNRPKKPVVVDNCGLL 75
            K GL+SMV+++    DSRFFI+IKDDAGWAD+RY AFG V EGMD++ +IEKV V    N PK  + +   GLL
Sbjct:  206 KAGLVSMVKDKSGGADSRFFITIKDDAGWADDRYAAFGIVEEGMDLVGKIEKVDVSRPKNTPKVAISIQRSGLL 279          
BLAST of mRNA_H-elongata_contig63314.13907.1 vs. uniprot
Match: A0A7R9W6P2_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W6P2_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 4.540e-18
Identity = 41/74 (55.41%), Postives = 52/74 (70.27%), Query Frame = 0
Query:    2 KEGLLSMVRNEDKQGDSRFFISIKDDAGWADNRYVAFGRVAEGMDVIHQIEKVKVEGGTNRPKKPVVVDNCGLL 75
            K GL+SMVR++    DSRFFI++KDDAGWAD+RY AFG V EGMD++ +IEKV V    N PK  V +   G +
Sbjct:  113 KAGLVSMVRDKTGGVDSRFFINLKDDAGWADDRYAAFGIVEEGMDLVGKIEKVDVARPKNTPKVAVRITGSGFV 186          
BLAST of mRNA_H-elongata_contig63314.13907.1 vs. uniprot
Match: A0A5J4Z0I4_PORPP (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0I4_PORPP)

HSP 1 Score: 82.4 bits (202), Expect = 5.750e-18
Identity = 38/72 (52.78%), Postives = 50/72 (69.44%), Query Frame = 0
Query:    4 GLLSMVRNEDKQGDSRFFISIKDDAGWADNRYVAFGRVAEGMDVIHQIEKVKVEGGTNRPKKPVVVDNCGLL 75
            GL+SM    D + DSRF I  K D+G+ D RY+AFGRV EGM VI+ +E++   G  NRPK+PV + +CGLL
Sbjct:   90 GLISMCHARDGKADSRFLIQTKADSGYLDGRYIAFGRVLEGMSVIYHMEEIGGVGPQNRPKQPVTIVDCGLL 161          
BLAST of mRNA_H-elongata_contig63314.13907.1 vs. uniprot
Match: A0A4D9CTD0_9STRA (PPIase cyclophilin-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTD0_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 4.350e-17
Identity = 35/73 (47.95%), Postives = 52/73 (71.23%), Query Frame = 0
Query:    3 EGLLSMVRNEDKQGDSRFFISIKDDAGWADNRYVAFGRVAEGMDVIHQIEKVKVEGGTNRPKKPVVVDNCGLL 75
            EG+LSMV ++    DSRFFI++  D  WAD RYVAFGRV +G++V+ ++EKV+V+  +N P  P+ +   G+L
Sbjct:   35 EGMLSMVNDKSGMVDSRFFINMGKDGSWADGRYVAFGRVTKGLEVLKEVEKVEVKPPSNVPTLPIKITAAGVL 107          
BLAST of mRNA_H-elongata_contig63314.13907.1 vs. uniprot
Match: B8C839_THAPS (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C839_THAPS)

HSP 1 Score: 79.0 bits (193), Expect = 1.200e-16
Identity = 38/78 (48.72%), Postives = 54/78 (69.23%), Query Frame = 0
Query:    3 EGLLSMVRNEDKQGDSRFFISIKDDAGWADNRYVAFGRVAE-----GMDVIHQIEKVKVEGGTNRPKKPVVVDNCGLL 75
            +GL+S VRN +   DSRFFI  +DDAGWAD+RY AFG V E     GM+++ ++ +++V+   N PK PV++  CGLL
Sbjct:  101 KGLVSAVRNANGTIDSRFFIQTEDDAGWADDRYAAFGIVLEEEGTGGMELVKKLSRLEVKAPQNSPKDPVLIVGCGLL 178          
BLAST of mRNA_H-elongata_contig63314.13907.1 vs. uniprot
Match: K8YUC4_NANGC (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YUC4_NANGC)

HSP 1 Score: 77.8 bits (190), Expect = 9.530e-16
Identity = 35/73 (47.95%), Postives = 52/73 (71.23%), Query Frame = 0
Query:    3 EGLLSMVRNEDKQGDSRFFISIKDDAGWADNRYVAFGRVAEGMDVIHQIEKVKVEGGTNRPKKPVVVDNCGLL 75
            EG+LSMV ++    DSRFFI++  D  WAD RYVAFGRV +G++V+ ++EKV+V+  +N P  P+ +   G+L
Sbjct:  162 EGMLSMVNDKSGTVDSRFFINMGKDGSWADGRYVAFGRVTKGLEVLKEVEKVEVKPPSNVPTLPIKITAAGVL 234          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63314.13907.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0Y5_ECTSI3.480e-3984.00Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectoca... [more]
A0A835YNC6_9STRA3.490e-2460.27Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribon... [more]
A0A6V1WNP3_HETAK1.840e-1954.17Peptidyl-prolyl cis-trans isomerase n=1 Tax=Hetero... [more]
A0A6V2NXR4_9STRA3.780e-1955.41Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ditylu... [more]
A0A7S4MQY5_9STRA4.250e-1956.76Peptidyl-prolyl cis-trans isomerase n=2 Tax=Odonte... [more]
A0A7R9W6P2_9STRA4.540e-1855.41Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pseudi... [more]
A0A5J4Z0I4_PORPP5.750e-1852.78Peptidyl-prolyl cis-trans isomerase n=1 Tax=Porphy... [more]
A0A4D9CTD0_9STRA4.350e-1747.95PPIase cyclophilin-type domain-containing protein ... [more]
B8C839_THAPS1.200e-1648.72Peptidyl-prolyl cis-trans isomerase (Fragment) n=1... [more]
K8YUC4_NANGC9.530e-1647.95Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nannoc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029000Cyclophilin-like domain superfamilyGENE3D2.40.100.10coord: 1..75
e-value: 1.9E-20
score: 75.4
IPR029000Cyclophilin-like domain superfamilySUPERFAMILY50891Cyclophilin-likecoord: 3..75
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00160Pro_isomerasecoord: 2..73
e-value: 6.4E-18
score: 65.5
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50072CSA_PPIASE_2coord: 1..74
score: 14.251
NoneNo IPR availablePANTHERPTHR11071PEPTIDYL-PROLYL CIS-TRANS ISOMERASEcoord: 3..74
NoneNo IPR availablePANTHERPTHR11071:SF471PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 5, CHLOROPLASTICcoord: 3..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig63314contigH-elongata_contig63314:1465..2397 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig63314.13907.1mRNA_H-elongata_contig63314.13907.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig63314 959..2696 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig63314.13907.1 ID=prot_H-elongata_contig63314.13907.1|Name=mRNA_H-elongata_contig63314.13907.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=76bp
MKEGLLSMVRNEDKQGDSRFFISIKDDAGWADNRYVAFGRVAEGMDVIHQ
IEKVKVEGGTNRPKKPVVVDNCGLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029000Cyclophilin-like_dom_sf
IPR002130Cyclophilin-type_PPIase_dom