prot_H-elongata_contig63270.13903.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig63270.13903.1
Unique Nameprot_H-elongata_contig63270.13903.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length102
Homology
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BLAST of mRNA_H-elongata_contig63270.13903.1 vs. uniprot
Match: D8LJI6_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJI6_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 2.870e-12
Identity = 61/68 (89.71%), Postives = 62/68 (91.18%), Query Frame = 0 
Query:   35 DGLRPXXXXXXXXXXXXXXXXXXXXXXXXFCHPSFGYPSDKKARRCARHRLENMEGVKGHRHKRRKEA 102
            DGLRP  XXXXXXXXXXXXXXXXXXXXXX  HPSFGY SDKKARRCARHRLENMEGVKGHR KRR+EA
Sbjct:  594 DGLRPVCXXXXXXXXXXXXXXXXXXXXXXXXHPSFGYASDKKARRCARHRLENMEGVKGHRQKRRREA 661
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63270.13903.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LJI6_ECTSI2.870e-1289.71EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig63270contigH-elongata_contig63270:2646..3357 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig63270.13903.1mRNA_H-elongata_contig63270.13903.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig63270 2646..3357 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig63270.13903.1 ID=prot_H-elongata_contig63270.13903.1|Name=mRNA_H-elongata_contig63270.13903.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=102bp
RPSVCSGHRETGMVDIVSRRCREPECGRRPLYNLDGLRPVCCSQHKEPGM
IDVVSTRCQEPGCFCHPSFGYPSDKKARRCARHRLENMEGVKGHRHKRRK
EA
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