prot_H-elongata_contig63153.13890.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig63153.13890.1
Unique Nameprot_H-elongata_contig63153.13890.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length102
Homology
BLAST of mRNA_H-elongata_contig63153.13890.1 vs. uniprot
Match: A0A6H5K9J2_9PHAE (Ubiquitinyl hydrolase 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9J2_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 3.840e-40
Identity = 69/101 (68.32%), Postives = 83/101 (82.18%), Query Frame = 0
Query:    2 RDTTLRKEADMGGEWINPYKSVVPRAGYYDINVLLEALKLKDCHVSVHAVFNPKDPHAVARSTENLDPRGSGGDVRGVVVNRVTISVLGGLVTGSHYYPII 102
            R+ T+RKE+ MG  W+NPYKSVVP+ GYYDIN LLEAL LK CHVS+HAVFNPK+P+AVA+S E+LDP  S G VRG+VVNRV+ S+LGGL T  H+Y II
Sbjct:   45 REATMRKESGMGRMWVNPYKSVVPQVGYYDINCLLEALNLKKCHVSLHAVFNPKEPNAVAKSLEHLDP--SLGGVRGIVVNRVSKSLLGGLYTTHHFYAII 143          
BLAST of mRNA_H-elongata_contig63153.13890.1 vs. uniprot
Match: D8LDY3_ECTSI (Ubiquitinyl hydrolase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDY3_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 4.190e-37
Identity = 64/91 (70.33%), Postives = 76/91 (83.52%), Query Frame = 0
Query:   12 MGGEWINPYKSVVPRAGYYDINVLLEALKLKDCHVSVHAVFNPKDPHAVARSTENLDPRGSGGDVRGVVVNRVTISVLGGLVTGSHYYPII 102
            MG  W+NPYKSVVP+ GYYDIN LLEALKLK CH+S+HAVFNPK+P+AVA+S E+LDP  S G VRG+VVNRV+ S+LGGL T  H+Y II
Sbjct:    1 MGRMWVNPYKSVVPQVGYYDINCLLEALKLKKCHISLHAVFNPKEPNAVAKSLEHLDP--SLGGVRGIVVNRVSKSLLGGLYTTHHFYAII 89          
BLAST of mRNA_H-elongata_contig63153.13890.1 vs. uniprot
Match: D7FI75_ECTSI (Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI75_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 2.200e-20
Identity = 49/101 (48.51%), Postives = 64/101 (63.37%), Query Frame = 0
Query:    2 RDTTLRKEADMGGEWINPYKSVVPRAGYYDINVLLEALKLKDCHVSVHAVFNPKDPHAVARSTENLDPRGSGGDVRGVVVNRVTISVLGGLVTGSHYYPII 102
            R+ TLR E+ +    INPYKSV+P  G YDINV+LEALKL++C VS+H VFN KDP A   +   +D       +RGV+VN V  S+L G     H+Y I+
Sbjct:   40 REATLRSESGLRRLLINPYKSVIPMVGDYDINVVLEALKLRECRVSLHVVFNAKDPTAFELALARVD--WDSATIRGVIVNFVCRSLLWGSWVTHHFYAIV 138          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63153.13890.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K9J2_9PHAE3.840e-4068.32Ubiquitinyl hydrolase 1 n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDY3_ECTSI4.190e-3770.33Ubiquitinyl hydrolase 1 n=1 Tax=Ectocarpus silicul... [more]
D7FI75_ECTSI2.200e-2048.51Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig63153contigH-elongata_contig63153:2597..3273 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig63153.13890.1mRNA_H-elongata_contig63153.13890.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig63153 2597..3273 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig63153.13890.1 ID=prot_H-elongata_contig63153.13890.1|Name=mRNA_H-elongata_contig63153.13890.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=102bp
DRDTTLRKEADMGGEWINPYKSVVPRAGYYDINVLLEALKLKDCHVSVHA
VFNPKDPHAVARSTENLDPRGSGGDVRGVVVNRVTISVLGGLVTGSHYYP
II
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