prot_H-elongata_contig63005.13878.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig63005.13878.1
Unique Nameprot_H-elongata_contig63005.13878.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length214
Homology
BLAST of mRNA_H-elongata_contig63005.13878.1 vs. uniprot
Match: D7FXL6_ECTSI (DNA-damage-inducible protein f, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXL6_ECTSI)

HSP 1 Score: 311 bits (796), Expect = 3.720e-98
Identity = 155/204 (75.98%), Postives = 178/204 (87.25%), Query Frame = 0
Query:    1 SPPVSQVLPFSCSYVYIRALGFVAVTMSMVLQGAYLAKKDVVTPIKSVAGASVVNLVLDCLAVFVWGMGIKGAALSTTVAQWAALVFLLKQYWPDLRKSGKVSFMPYRKELHQFLSLGIPMCLALSGQVATCISLTVAASGCDTVALAAHQVLYGVFLLFCPIGEAVSQTVQTFLPAFTVKRPTKPGGRASRTLTYSKVCVDLV 204
            +P VS VLP SCSYVYIRA+GFVAVT+SMVLQ AYLA+KD+ TPIKSVAGASV NLVLDC+AVF  GMGIKGAAL+TTVAQW  LV+L+K++WPDL+KSG+VSF PYRKEL  FL LG P CLALSGQVATC+++TVAASGCDTVALAAHQ+LYGVFLLFCPIGEAVSQTVQT+LP +TVKRP +  GR  RTLT+ K  V ++
Sbjct:  466 NPAVSSVLPHSCSYVYIRAMGFVAVTVSMVLQSAYLARKDIATPIKSVAGASVANLVLDCVAVFGLGMGIKGAALATTVAQWVGLVYLVKEFWPDLQKSGQVSFFPYRKELKTFLQLGAPTCLALSGQVATCVAVTVAASGCDTVALAAHQILYGVFLLFCPIGEAVSQTVQTYLPGYTVKRPPRRDGRPRRTLTFGKSAVRMI 669          
BLAST of mRNA_H-elongata_contig63005.13878.1 vs. uniprot
Match: A0A6H5L6W0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6W0_9PHAE)

HSP 1 Score: 311 bits (796), Expect = 7.380e-98
Identity = 155/204 (75.98%), Postives = 178/204 (87.25%), Query Frame = 0
Query:    1 SPPVSQVLPFSCSYVYIRALGFVAVTMSMVLQGAYLAKKDVVTPIKSVAGASVVNLVLDCLAVFVWGMGIKGAALSTTVAQWAALVFLLKQYWPDLRKSGKVSFMPYRKELHQFLSLGIPMCLALSGQVATCISLTVAASGCDTVALAAHQVLYGVFLLFCPIGEAVSQTVQTFLPAFTVKRPTKPGGRASRTLTYSKVCVDLV 204
            +P VS VLP SCSYVYIRA+GFVAVT+SMVLQ AYLA+KD+ TPIKSVAGASV NLVLDC+AVF  GMGIKGAAL+TTVAQW  LV+L+K++WPDL+KSG+VSF PYRKEL  FL LG P CLALSGQVATC+++TVAASGCDTVALAAHQ+LYGVFLLFCPIGEAVSQTVQT+LP +TVKRP +  GR  RTLT+ K  V ++
Sbjct:  552 NPAVSSVLPHSCSYVYIRAMGFVAVTVSMVLQSAYLARKDIATPIKSVAGASVANLVLDCVAVFGLGMGIKGAALATTVAQWVGLVYLVKEFWPDLQKSGQVSFFPYRKELKTFLQLGAPTCLALSGQVATCVAVTVAASGCDTVALAAHQILYGVFLLFCPIGEAVSQTVQTYLPGYTVKRPPRRDGRPRRTLTFGKSAVRMI 755          
BLAST of mRNA_H-elongata_contig63005.13878.1 vs. uniprot
Match: A0A7S0ECV6_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0ECV6_9EUKA)

HSP 1 Score: 113 bits (283), Expect = 1.740e-25
Identity = 73/201 (36.32%), Postives = 116/201 (57.71%), Query Frame = 0
Query:    7 VLPFSCSYVYIRALGFVAVTMSMVLQGAYLAKKDVVTPIKSVAGASVVNLVLDCLAVFVWGMGIKGAALSTTVAQWAALVFLLKQYWPDLRKSGKVS---FMPYRKELHQFLSLGIPMCLALSGQVATCISLTVAASGCDTVALAAHQVLYGVFLLFCPIGEAVSQTVQTFLPAFTVKRPTKPGGRASRTLTYSKVCVDLV 204
            VL  +  Y  IRALGF A  +++VLQ A+LA KD ++P+ +V  +++ NLVLD   V   G+G  GAA  T  + +     LL  +    R  G+ +    +P R E+ + L   +PM +AL  +V+  +S+T++A+   TVALA++QV+  V+ LFCPIGEA+S  +QT++P+    R  + G +   T   + +   LV
Sbjct:  296 VLAAATEYTVIRALGFPAALLTLVLQAAFLASKDALSPLLAVPLSALTNLVLDLFLVGSLGLGTAGAAWGTVASLYVNGFTLLAMWHVKARTLGEATPLFTLPSRAEMQKLLVFIVPMLVALCSRVSMGLSITLSATALGTVALASNQVVESVYWLFCPIGEAISLCMQTYMPSVLAARR-RAGAQMRATCERTSLVAALV 495          
BLAST of mRNA_H-elongata_contig63005.13878.1 vs. uniprot
Match: A0A8J2WS84_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WS84_9STRA)

HSP 1 Score: 103 bits (256), Expect = 7.500e-22
Identity = 79/214 (36.92%), Postives = 115/214 (53.74%), Query Frame = 0
Query:   13 SYVYIRALGFVAVTMSMVLQGAYLAKKDVVTPIKSVAGASVVNLVLDCLAVFVWGMGIKGAALSTTVAQWAALVFLLK-----QYWPDLRKS-GKVSFMPYRKELHQFLSLGIPMCLALSGQVATCISLTVAASGC-----DTVALAAHQVLYGVFLLFCPIGEAVSQTVQTFLPAFTV-----------KRPTKPGGRASRTLTYSKVCVDLV 204
            +Y  IR+L FV   + MVLQ   LA+++V  P+K+   +   NLV D   + V  MG+ GAAL+TT AQ  AL+ LL+     ++ P   K   + +  P+R    Q  + G P+  ALS + A  +SL+ AA+       D  ALAAHQ+L G++ +F P+G+A+SQTVQTFLP   V           ++ +K  G  SR +    V   LV
Sbjct:  311 AYTRIRSLAFVPALLIMVLQSTSLARRNVRAPLKAAGLSGAANLVGD--GILVPTMGLAGAALATTAAQIVALIALLQDAAKGKFLPSSPKQWARSAGAPFR----QIFTKGAPVVAALSAKTAVLLSLSYAAASTATKRGDLAALAAHQILVGLYFVFAPVGDALSQTVQTFLPRSIVADQLDEVDRPPQKRSKALGPKSRAVVKGAVAAALV 518          
BLAST of mRNA_H-elongata_contig63005.13878.1 vs. uniprot
Match: A0A8J2WR19_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WR19_9STRA)

HSP 1 Score: 100 bits (250), Expect = 4.070e-21
Identity = 69/178 (38.76%), Postives = 101/178 (56.74%), Query Frame = 0
Query:    5 SQVLPFSCSYVYIRALGFVAVTMSMVLQGAYLAKKDVVTPIKSVAGASVVNLVLDCLAVFVWGMGIKGAALSTTVAQWAALVFLLKQYWPDLRKSGKVSFMPYR-----KELHQFLSLGIPMCLALSGQVATCISLTVAASGCDTVALAAHQVLYGVFLLFCPIGEAVSQTVQTFLPA 177
            ++ LP + SY  +RALGF A  +++VLQ A LA++DV TP+K+V   ++VN V D + V   G G+ GAA +T  AQ  A   LL+       ++   + +P R     +    FL       LALS +++  +S+   AS C T ALAA Q L G F +F P+G+A+ QT+Q  LPA
Sbjct:  162 ARALPLAVSYTRVRALGFPAALLTVVLQSAALARRDVRTPLKAVWLGALVNGVGDYVLVARCGAGVAGAAAATVAAQCVAAGVLLRA------EARAATTLPRRLADRARSAWSFLIRCAAPALALSARLSVQLSVAATASACGTAALAAQQALSGTFQIFRPLGDALGQTMQALLPA 333          
BLAST of mRNA_H-elongata_contig63005.13878.1 vs. uniprot
Match: L1IGQ5_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IGQ5_GUITC)

HSP 1 Score: 88.2 bits (217), Expect = 1.980e-17
Identity = 61/172 (35.47%), Postives = 89/172 (51.74%), Query Frame = 0
Query:    5 SQVLPFSCSYVYIRALGFVAVTMSMVLQGAYLAKKDVVTPIKSVAGASVVNLVLDCLAVFVWGMGIKGAALSTTVAQWAALVFLLKQYWPDLRKSGKVSFMPYRKELHQFLSLGIPMCLALSGQVATCISLTVAASGCDTVALAAHQVLYGVFLLFCPIGEAVSQTVQTFLP 176
            +  L  S  YV IR LG     + MV Q A +  KD  +P+++VA  + VN+ LD L V     G+ GAA++TT++Q+A   +L       L K   +  +P  KE  +F     P+ L   G+       T AA+   T+ALAAHQ++  +F  F   GE+V QT Q F+P
Sbjct:  116 ADTLDLSMRYVLIRGLGSAPTLLCMVAQAACIGAKDADSPLRAVAILAGVNIFLDWLFVGPLKTGVGGAAIATTISQFAGAFYLY------LAKRKGLFVIPTMKEFVKFFQFAGPIFLISFGRGYCWNICTPAAAAAGTIALAAHQIVINIFFFFTIAGESVFQTAQAFMP 281          
BLAST of mRNA_H-elongata_contig63005.13878.1 vs. uniprot
Match: A0A7S0IW58_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IW58_9EUKA)

HSP 1 Score: 89.4 bits (220), Expect = 3.860e-17
Identity = 66/179 (36.87%), Postives = 95/179 (53.07%), Query Frame = 0
Query:   14 YVYIRALGFVAVTMSMVLQGAYLAKKDVVTPIKSVAGASVVNLVLDCLAVFVWGMGIKGAALSTTVAQW---AALVFLLKQYWPDLRKSGKVSF------------MPYRKELHQFLSLGIPMCLALSGQVATCISLTVAASGCDTVALAAHQVLYGVFLLFCPIGEAVSQTVQTFLPA 177
            Y  IRA G+ A   +MVLQ A+LA KD ++P+ ++   ++ NLV D + V   GMG  GAA +T  +Q+   A L+ L K+     R  G  S             +P R+E    L    PM LA+  +    I++    +   TV+LAAHQV+  ++ LF P G+AVS +VQ FLPA
Sbjct:  293 YTAIRAFGYPAALTTMVLQAAFLASKDAMSPLLTLPAVALANLVGDLVLVGPMGMGPAGAAWATIASQFVNAALLLALWKRKLATGRPEGCGSAAEGCGAGVPLLALPTRQEFRSLLVFIAPMMLAIGARSYMGIAVAATVATLGTVSLAAHQVVECLYWLFTPFGDAVSLSVQAFLPA 471          
BLAST of mRNA_H-elongata_contig63005.13878.1 vs. uniprot
Match: A0A7S0G8B3_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G8B3_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 1.450e-16
Identity = 76/217 (35.02%), Postives = 107/217 (49.31%), Query Frame = 0
Query:    5 SQVLPFSCSYVYIRALGFVAVTMSMVLQGAYLAKKDVVTPIKSVAGASVVNLVLDCLAVFVWGMGIKGAALSTTVAQWAALVFLLKQYWPDLRK-----------SGKVSFM--PYRKELHQFLSLGIPMCLALSGQ--VATCISLTVAASGCDTVALAAHQVLYGVFLLFCPIGEAVSQTVQTFLPAFTVKRPTK--PGGRASRTLTYSKVCVDLV 204
            + V+P +  Y  IRA G   V M+ V + A LA+KD   P+ SVA AS++N V     V + G+GI+GAA+ T VA  AA  FLL +      K           S +V  +  P R+   +F S   P+   + G+  V   +  T+   G  +VALAAHQVL   F  + P+G++V  T Q FLPA   K   +  P   A R L  + +   LV
Sbjct:  185 ASVVPSALQYATIRAFGQPFVVMASVARAAALARKDTRGPLVSVALASLLNFVGTTSLVRLTGLGIRGAAIGTLVADIAATTFLLTRIRTSRTKRQNRIIDEKLHSKQVPLLVLPSRESFFRFGSYAAPIFFTILGKSVVYNGVGATIGRMG--SVALAAHQVLLQSFFFWTPVGDSVGMTSQVFLPAILAKEKAEGVPQRGAKRLLFVTGMVSGLV 399          
BLAST of mRNA_H-elongata_contig63005.13878.1 vs. uniprot
Match: A0A7S1VEP0_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VEP0_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 2.150e-16
Identity = 66/194 (34.02%), Postives = 97/194 (50.00%), Query Frame = 0
Query:    6 QVLPFSCSYVYIRALGFVAVTMSMVLQGAYLAKKDVVTPIKSVAGASVVNLVLDCLAVFVWGMGIKGAALSTTVAQWAALVFLLKQYWPDL-------------RKSGKVSFMPYRKEL------HQFLSLGIPMCLALSGQVATCISLTVAASGC--DTVALAAHQVLYGVFLLFCPIGEAVSQTVQTFLPAF 178
             +L +S  YV IRAL      +  VLQ A L  KD VTP+ +V  + VVN++ D +AV   GMG++GAA++TT+AQWA+   L+      L             RK  K      +++         FL+   P+   + G++A    +T AA+G       LA+HQ++   F    P  E +SQT QTFLP +
Sbjct:  220 HLLDWSTEYVQIRALSMPTSLLLGVLQAALLGAKDSVTPLIAVVYSMVVNVIGDYIAVKRLGMGLRGAAMATTLAQWASTYALIGPARQKLVKDHNLGLLMGGGRKGDKEGGKKKKRKNDGLVTGRSFLAFAAPVLTLILGKLAAFGFMTHAAAGLPGQPTTLASHQIILSTFFFISPFLEVISQTAQTFLPPY 413          
BLAST of mRNA_H-elongata_contig63005.13878.1 vs. uniprot
Match: A0A7S2XNY1_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNY1_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 2.930e-16
Identity = 59/179 (32.96%), Postives = 93/179 (51.96%), Query Frame = 0
Query:   14 YVYIRALGFVAVTMSMVLQGAYLAKKDVVTPIKSVAGASVVNLVLDCLAVFVWGMGIKGAALSTTVAQWAALVFLLKQYWPDLRKSGKVSFMPYRKELHQ------------FLSLGIPMCLALSGQVATCISLTVAASGC--DTVALAAHQVLYGVFLLFCPIGEAVSQTVQTFLPAF 178
            YV IRAL      +  VLQ A L  KD +TP+ ++  ++V+N++ D + V   GMG+KGA+++TT+AQWAA + L+      L   G +  +   +++              FL    P+   + G++A    +T AA+      + LAAHQ+   +F    P  E +SQT QTFLP +
Sbjct:  241 YVNIRALSMPTSLLLGVLQSALLGAKDSITPLVAILYSTVINVIGDYILVSRLGMGLKGASIATTLAQWAATISLIGPARRALLNGGGLQLLGSSRKVADGGTTNDVVTSKTFLKFAAPVLTLIIGKIAAFGFMTNAAAALPGQPMTLAAHQICLSLFFFMSPFLEVMSQTAQTFLPPY 419          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63005.13878.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXL6_ECTSI3.720e-9875.98DNA-damage-inducible protein f, putative n=1 Tax=E... [more]
A0A6H5L6W0_9PHAE7.380e-9875.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0ECV6_9EUKA1.740e-2536.32Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A8J2WS84_9STRA7.500e-2236.92Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A8J2WR19_9STRA4.070e-2138.76Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
L1IGQ5_GUITC1.980e-1735.47Uncharacterized protein (Fragment) n=1 Tax=Guillar... [more]
A0A7S0IW58_9EUKA3.860e-1736.87Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
A0A7S0G8B3_9STRA1.450e-1635.02Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S1VEP0_9STRA2.150e-1634.02Hypothetical protein n=2 Tax=Grammatophora oceanic... [more]
A0A7S2XNY1_9STRA2.930e-1632.96Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029303Polysaccharide biosynthesis protein, C-terminal domainPFAMPF14667Polysacc_synt_Ccoord: 17..159
e-value: 1.7E-7
score: 31.4
NoneNo IPR availablePANTHERPTHR42893:SF9PROTEIN DETOXIFICATION 46, CHLOROPLASTICcoord: 6..182
NoneNo IPR availablePANTHERPTHR42893FAMILY NOT NAMEDcoord: 6..182
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 176..213
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 141..151
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..140
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 94..113
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 48..67
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 15..36
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 37..47
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 73..93
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 68..72
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 152..175
NoneNo IPR availableTMHMMTMhelixcoord: 117..139
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 48..70
NoneNo IPR availableTMHMMTMhelixcoord: 152..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig63005contigH-elongata_contig63005:441..2560 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig63005.13878.1mRNA_H-elongata_contig63005.13878.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig63005 441..2560 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig63005.13878.1 ID=prot_H-elongata_contig63005.13878.1|Name=mRNA_H-elongata_contig63005.13878.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=214bp
SPPVSQVLPFSCSYVYIRALGFVAVTMSMVLQGAYLAKKDVVTPIKSVAG
ASVVNLVLDCLAVFVWGMGIKGAALSTTVAQWAALVFLLKQYWPDLRKSG
KVSFMPYRKELHQFLSLGIPMCLALSGQVATCISLTVAASGCDTVALAAH
QVLYGVFLLFCPIGEAVSQTVQTFLPAFTVKRPTKPGGRASRTLTYSKVC
VDLVFPPCFCTLN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029303Polysacc_synt_C