prot_H-elongata_contig62891.13866.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig62891.13866.1
Unique Nameprot_H-elongata_contig62891.13866.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length39
Homology
BLAST of mRNA_H-elongata_contig62891.13866.1 vs. uniprot
Match: D7FL41_ECTSI (WD40 repeat containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL41_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 1.840e-14
Identity = 31/35 (88.57%), Postives = 32/35 (91.43%), Query Frame = 0
Query:    5 NAVILATAGYDHKIHFWDPPSGECLKTLRFSDSQV 39
            N VILATAGYDHKIHFW+PPSGEC  TLRFSDSQV
Sbjct:    2 NEVILATAGYDHKIHFWEPPSGECRSTLRFSDSQV 36          
BLAST of mRNA_H-elongata_contig62891.13866.1 vs. uniprot
Match: A0A836C989_9STRA (WD40 repeat-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C989_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.780e-12
Identity = 27/35 (77.14%), Postives = 33/35 (94.29%), Query Frame = 0
Query:    5 NAVILATAGYDHKIHFWDPPSGECLKTLRFSDSQV 39
            N+VILATAGYDHK++FW+PPSG C +TLR+SDSQV
Sbjct:    2 NSVILATAGYDHKVNFWEPPSGVCSRTLRYSDSQV 36          
BLAST of mRNA_H-elongata_contig62891.13866.1 vs. uniprot
Match: K8Z5Y7_NANGC (Wd40 component of tor1 and tor2 kinase complex (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z5Y7_NANGC)

HSP 1 Score: 59.7 bits (143), Expect = 3.840e-11
Identity = 22/38 (57.89%), Postives = 32/38 (84.21%), Query Frame = 0
Query:    2 DKTNAVILATAGYDHKIHFWDPPSGECLKTLRFSDSQV 39
            + ++AV+LATAGYDHKI FW+ P+G C +++R+ DSQV
Sbjct:    1 EMSSAVVLATAGYDHKIRFWEAPTGVCARSIRYPDSQV 38          
BLAST of mRNA_H-elongata_contig62891.13866.1 vs. uniprot
Match: A0A6U2PBM4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2PBM4_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.170e-9
Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    6 AVILATAGYDHKIHFWDPPSGECLKTLRFSDSQV 39
            +VILATAGYDHKI FW+ PSG C +TLR+ DSQV
Sbjct:    2 SVILATAGYDHKIRFWEAPSGICSRTLRYPDSQV 35          
BLAST of mRNA_H-elongata_contig62891.13866.1 vs. uniprot
Match: A0A4D9DF34_9STRA (Target of rapamycin complex subunit LST8 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DF34_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 3.220e-9
Identity = 22/36 (61.11%), Postives = 31/36 (86.11%), Query Frame = 0
Query:    4 TNAVILATAGYDHKIHFWDPPSGECLKTLRFSDSQV 39
            ++AV+LATAGYDHKI FW+ P+G C +++R+ DSQV
Sbjct:    2 SSAVVLATAGYDHKIRFWEAPTGVCARSIRYPDSQV 37          
BLAST of mRNA_H-elongata_contig62891.13866.1 vs. uniprot
Match: A0A4Y7L320_PAPSO (Uncharacterized protein n=1 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7L320_PAPSO)

HSP 1 Score: 57.8 bits (138), Expect = 4.850e-9
Identity = 22/34 (64.71%), Postives = 28/34 (82.35%), Query Frame = 0
Query:    6 AVILATAGYDHKIHFWDPPSGECLKTLRFSDSQV 39
            +VILATAGYDH I FW+P SG C +TL++ DSQ+
Sbjct:   92 SVILATAGYDHTIRFWEPKSGRCYRTLQYPDSQI 125          
BLAST of mRNA_H-elongata_contig62891.13866.1 vs. uniprot
Match: A0A7S3LCW6_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LCW6_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 8.500e-9
Identity = 22/34 (64.71%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    6 AVILATAGYDHKIHFWDPPSGECLKTLRFSDSQV 39
            +V+LAT GYDHKI FW+ PSG+C + ++FSDSQV
Sbjct:    2 SVVLATGGYDHKICFWEAPSGKCQRVIKFSDSQV 35          
BLAST of mRNA_H-elongata_contig62891.13866.1 vs. uniprot
Match: UPI000E6F71D0 (target of rapamycin complex subunit LST8 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6F71D0)

HSP 1 Score: 57.8 bits (138), Expect = 1.100e-8
Identity = 22/34 (64.71%), Postives = 28/34 (82.35%), Query Frame = 0
Query:    6 AVILATAGYDHKIHFWDPPSGECLKTLRFSDSQV 39
            +VILATAGYDH I FW+P SG C +TL++ DSQ+
Sbjct:    5 SVILATAGYDHTIRFWEPKSGRCYRTLQYPDSQI 38          
BLAST of mRNA_H-elongata_contig62891.13866.1 vs. uniprot
Match: R1CS11_EMIHU (Uncharacterized protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CS11_EMIHU)

HSP 1 Score: 56.6 bits (135), Expect = 1.300e-8
Identity = 23/38 (60.53%), Postives = 28/38 (73.68%), Query Frame = 0
Query:    2 DKTNAVILATAGYDHKIHFWDPPSGECLKTLRFSDSQV 39
            D   +V+LATAGYDH I FW+ P+G C KTL+  DSQV
Sbjct:    3 DSGQSVLLATAGYDHTIRFWEAPTGVCYKTLQHPDSQV 40          
BLAST of mRNA_H-elongata_contig62891.13866.1 vs. uniprot
Match: A0A7S4MAT8_9EUKA (Target of rapamycin complex subunit LST8 n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4MAT8_9EUKA)

HSP 1 Score: 57.4 bits (137), Expect = 1.500e-8
Identity = 23/36 (63.89%), Postives = 28/36 (77.78%), Query Frame = 0
Query:    4 TNAVILATAGYDHKIHFWDPPSGECLKTLRFSDSQV 39
            T+ V+LATAGYDH I FW+ PSG C +TL+  DSQV
Sbjct:    5 TSQVLLATAGYDHTIRFWEAPSGHCTRTLQHPDSQV 40          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62891.13866.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL41_ECTSI1.840e-1488.57WD40 repeat containing protein n=1 Tax=Ectocarpus ... [more]
A0A836C989_9STRA1.780e-1277.14WD40 repeat-containing protein n=1 Tax=Tribonema m... [more]
K8Z5Y7_NANGC3.840e-1157.89Wd40 component of tor1 and tor2 kinase complex (Fr... [more]
A0A6U2PBM4_9STRA1.170e-973.53Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A4D9DF34_9STRA3.220e-961.11Target of rapamycin complex subunit LST8 n=3 Tax=M... [more]
A0A4Y7L320_PAPSO4.850e-964.71Uncharacterized protein n=1 Tax=Papaver somniferum... [more]
A0A7S3LCW6_9STRA8.500e-964.71Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
UPI000E6F71D01.100e-864.71target of rapamycin complex subunit LST8 n=1 Tax=P... [more]
R1CS11_EMIHU1.300e-860.53Uncharacterized protein (Fragment) n=1 Tax=Emilian... [more]
A0A7S4MAT8_9EUKA1.500e-863.89Target of rapamycin complex subunit LST8 n=1 Tax=P... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..39
e-value: 5.0E-7
score: 31.2
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilySUPERFAMILY50998Quinoprotein alcohol dehydrogenase-likecoord: 8..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig62891contigH-elongata_contig62891:2693..2809 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig62891.13866.1mRNA_H-elongata_contig62891.13866.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig62891 2693..2809 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig62891.13866.1 ID=prot_H-elongata_contig62891.13866.1|Name=mRNA_H-elongata_contig62891.13866.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=39bp
MDKTNAVILATAGYDHKIHFWDPPSGECLKTLRFSDSQV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR011047Quinoprotein_ADH-like_supfam