prot_H-elongata_contig62542.13825.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig62542.13825.1 vs. uniprot
Match: D8LTA3_ECTSI (UBC core domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTA3_ECTSI) HSP 1 Score: 177 bits (450), Expect = 6.240e-43 Identity = 220/624 (35.26%), Postives = 289/624 (46.31%), Query Frame = 0
Query: 75 GGDSEXXXDDFAEAAAMLESSCLRSVCRQYMFGVDWRFISAHGLFYLALLKLLSDLLRPTVGPKGRRYRRGKARRRQQLSANDKNGERTDELLANFLLEPSADCRGLVELLESLCIGLDDLVAVPPDSAP--VLPPPAHLAHPPSPFLALAHNPPPSPASPTPPLIMTQQQSNFSS---KLTAVAHAGGVHNHQPYIFTHNHGSAPIISIIPPLAAPTLPSNXXXXXXXXXAVKAA--GQPELLPQVPLQTEIPISPGAPEWIPIPPPPPLPLSAKTAVVY----GPP--------------------------GVXXXXXXXXXXXXXXPAAPGGAAPPAKLAISPSEPGWTPIPPXXXXXQVLKPALXXXXXXXXXXXXXXXXXXXXIGGSQGSIMDIGLGTRADRSPWITAQQRESLEHEQGTALAELTRSVVEQAKAAAAAISAATACDDRIGEVLSRSATKTDGNGTRSCRGGAAKTESDRSVEGSGDGVVGTDKTTP-EAADEEPSEEAHYVEALAELRFDTMRMEAVSPGVDEIAPSDKGENIL-VRFRAGTRLSPRQRHHFWGAADAERSVPSARQRRLVRELRSLARELPLYWGSTIAVRVDEDRPHLLKASAKA 659
G D++ D A+A A L+ SCLRSVCRQY+FG DWRF+S H FYLALL+LL ++LRP GP G G RR+ A + R+ + LA LL PS DC G+V+LL+SLC+ LDDLVA PP P LP P L P + SPA+ QQS + A A A G + P + P + + + LP + V A P+ + +P+S P SA +A GPP XXXXXXXXXXX P P A +A SP+ XXX L A+XXXXX XXX XXXX M + G R + P + + E EH+QG A+A+L RSV+ AK+A + + DG+G+ A + E+D + D + P E+ + PSE+A Y+EA+ + +F TM+ME + + +K ++ + Q+HHFW A+AE S ARQRRLVRELRSLARELPLYWGSTIAVR+DE+RPHLLKA A
Sbjct: 510 GVDADYDDDIAAQATATLDGSCLRSVCRQYLFGADWRFVSTHQQFYLALLRLLQEVLRPFNGP-GAGGDGGGCRRQAAGGAGE---PRSRQPLAQSLLRPSVDCPGMVDLLDSLCVALDDLVACPPQPPPPAALPAPTRLPQPSA-----------SPAAHGKSQETAVQQSVLDAHAFSAAAAAVAAGAPSLGPANYLVQAKYHPKYNKYFKMLSVGLPRSAALLRMSKDGVDQAILDAPDAM--------LPLSGAGPAXXXXXXXXXXSASALSAAAAVSPAGPPCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGTPGVPSDGQDGAPVASSPAAEXXX------XXXXXLPSAIXXXXXAAAXXXSLPLTXXXXXXXXXXXXMGLRGGRRRELPP-PKSYEEEKREHDQGVAMADLARSVLVLAKSAVXXXXXXXXXXXXX-XTAGAATVERDGDGSS-----ATRAEADPGGRAAEDLPASEEVVAPTESVEAVPSEKALYLEAIEQEQFATMQMEVAALPPPPVTVGEKADDAPGLAALXXXXXXXXQQHHFWKVAEAEGSAFPARQRRLVRELRSLARELPLYWGSTIAVRMDEERPHLLKAMIAA 1097
BLAST of mRNA_H-elongata_contig62542.13825.1 vs. uniprot
Match: A0A6H5JLB4_9PHAE (UBC core domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLB4_9PHAE) HSP 1 Score: 127 bits (320), Expect = 1.290e-26 Identity = 80/161 (49.69%), Postives = 96/161 (59.63%), Query Frame = 0
Query: 86 AEAAAMLESSCLRSVCRQYMFGVDWRFISAHGLFYLALLKLLSDLLRP----TVGPKGRRYRRGKARRRQQLSANDKNGERTDELLANFLLEPSADCRGLVELLESLCIGLDDLVAVPPDSA-PVLPPPAHLAHPPSPFLALAHNPPPSPASPTPPLIMTQ 241
A+A A L+ SCLRSVCRQY+FG DWRF+S H FYLALL+LL ++LRP G G RG+A A R+ + LA LL PSADC G+V+LL+SLC+ LDDLVA PP P P L P + A H PPPSP SP L +TQ
Sbjct: 587 AQATAALDGSCLRSVCRQYLFGADWRFVSTHQQFYLALLRLLREVLRPFNDARPGGDGGGDCRGQA-------AGGAGEPRSPQPLARSLLHPSADCPGMVDLLDSLCVALDDLVACPPQPPQPAALAPTRLPQPSASPAAAKHLPPPSPTSPLKLLFLTQ 740 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62542.13825.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig62542.13825.1 ID=prot_H-elongata_contig62542.13825.1|Name=mRNA_H-elongata_contig62542.13825.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=662bpback to top |