prot_H-elongata_contig6248.13819.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6248.13819.1
Unique Nameprot_H-elongata_contig6248.13819.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length270
Homology
BLAST of mRNA_H-elongata_contig6248.13819.1 vs. uniprot
Match: D7FII9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FII9_ECTSI)

HSP 1 Score: 303 bits (775), Expect = 1.060e-99
Identity = 153/231 (66.23%), Postives = 181/231 (78.35%), Query Frame = 0
Query:   47 GDMSEADDAPELTKEFYEEVAMRWNTTVEGAMEVEKDIQFDK--------AIYDELRTRRDYGFEQDLGLELERRNITTKAEVAKIVEKGLEALPGVTSGSTFTPSSELTPREVVNSVLEALKNNDNPYRNHGVEVFIRFLSPSSAMKGVEMEGVARYLGENRNRALMHWDAIAYPRPLTLSGGEKKNKAFQPLKLQDTMTGSWHSVSVYMTLDAKTNHWLIESIIMKGDL 269
            G   E DD  ELTK FY E+A R   T +G  +  ++   D+           DELR RRD+GFEQDLGLELE+RNIT +AE  KI++ GLE +PGVTS +TF PSSELTPREVV SVLEALKNND PY NHGVEVFIRFL+PSSAM GVEM GVARYL ENRNRA MHW+ +A+PRPLT+SGG K+NKAFQP+KL+DTMTG+WHSVSVY+TLDA++N WLIES I+KG++
Sbjct:   83 GGAEEEDDTLELTKGFYSEIAARLGKTAQGQPQDSQETAKDEDSGSXXXXXXXDELRARRDFGFEQDLGLELEKRNITKEAEAKKIIDAGLEQMPGVTSSATFLPSSELTPREVVTSVLEALKNNDQPYHNHGVEVFIRFLAPSSAMHGVEMSGVARYLAENRNRAFMHWNTMAFPRPLTVSGGAKQNKAFQPVKLRDTMTGAWHSVSVYLTLDARSNCWLIESCIVKGEV 313          
BLAST of mRNA_H-elongata_contig6248.13819.1 vs. uniprot
Match: A0A7R9YD20_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YD20_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 2.640e-13
Identity = 68/232 (29.31%), Postives = 111/232 (47.84%), Query Frame = 0
Query:   57 ELTKEFYEEVAMRWNTTVEGAMEVEKDIQFDKAIYDELRTRRDYGFEQDLGL----ELERRNIT----TKAEVAKIVEKGLEA--LPGVTSGST------FTPSSELTPREVVNSVLEALKNNDNPYRNHGVEVFIRFLSPSSAMKGVEMEGVARY---LGENRNRALMHWDAIAYPRPLTLSGGEKKNKAFQPLKLQDTMTGSWHSVSVYMTLDAKTNH----WLIESIIM 265
            + T+EF+E V  R      G +  EKDI      Y+ LR R  +G E++        +E +N+T       E+ K   + +E       T+G         +P   LTP  VV S+L+A++ ND+PY NHG+EV  RF S +S+    +     +Y   + ++    L+ WDAI + +PL  +G     KA Q ++L+   +  W  V+V   L  +T      WL++S ++
Sbjct:   54 DFTREFFESVKEREG----GQLTEEKDI------YNALRERMGFGVEEEFARVRQQRIEGKNVTGDLDASEELLKATLRAMEQNIAENATAGQLPDIKLPTSPDPALTPGLVVMSILQAMRCNDSPYENHGIEVLTRFTSSASSATDTDEPSFRKYCDFIPKSEYGILLKWDAIRF-KPLEKAG----KKALQKIQLRLADSNEW--VTVKFALSERTTFLGETWLLDSFLI 268          
BLAST of mRNA_H-elongata_contig6248.13819.1 vs. uniprot
Match: A0A7S4ALD3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ALD3_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 2.770e-6
Identity = 48/136 (35.29%), Postives = 64/136 (47.06%), Query Frame = 0
Query:  140 TFTPSSELTPREVVNSVLEALKNNDNPYRNHGVEVFIRFLSPSSAMK---GVEMEGVARYLGENRNRALM-HWDAIAYPRPLTLSGGEKKNKAFQPLKLQDTMTGSWHSVSVYMTL-----DAKTNHWLIESIIMK 266
            T  P ++LT  EVV  VL ALKNNDNPY N GVE+   + SP S +K   G+       +L E   +AL  H +A       +  G     K F   +LQ     S   +SV   L     D     WLI+SI+++
Sbjct:  190 TTVPDADLTAGEVVLLVLTALKNNDNPYVNKGVEILFGYSSPGSQIKQEEGLTPAEYGEFLKETEYKALFEHLEATIEKGEYSFEG----KKGFFTARLQTGPAPS-DCISVNFILSGSSPDDDDGAWLIDSILIR 320          
BLAST of mRNA_H-elongata_contig6248.13819.1 vs. uniprot
Match: A0A7S0K9M8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0K9M8_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 5.750e-6
Identity = 41/130 (31.54%), Postives = 66/130 (50.77%), Query Frame = 0
Query:  143 PSSELTPREVVNSVLEALKNNDNPYRNHGVEVFIRFLSPSSAMKGVEMEGVARYLGE------NRNRALMHWDAIAYPRPLTLSGGEKKNKAFQPLKLQDTMTGSWHSVSVYMTLDAKTNHWLIESIIMK 266
            P +ELT  EVV  VLEAL+NNDNP  N GVE+   + S +S +  +E        GE      ++   L H D +      +    + K +AF  ++L D M  +  SV+  ++  +  + WLI+S +++
Sbjct:  244 PDAELTAGEVVTVVLEALRNNDNPSTNRGVEILFAYSSSASILADLERAPSVEEYGEMLRTSPDQKILLEHVDVLFDKADYS----QDKKRAFITVRLMD-MEKTLTSVNFILSTGSSDDCWLIDSHLVR 368          
BLAST of mRNA_H-elongata_contig6248.13819.1 vs. uniprot
Match: A0A7S2NRG0_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2NRG0_9EUKA)

HSP 1 Score: 56.2 bits (134), Expect = 2.070e-5
Identity = 27/64 (42.19%), Postives = 38/64 (59.38%), Query Frame = 0
Query:  148 TPREVVNSVLEALKNNDNPYRNHGVEVFIRFLSPSSAMKGVEMEGVARYLGENRNRALMHWDAI 211
            +PR+VV SV++AL+N D PY  HG EV +RF SP++    +  +  A YL E     L  WD +
Sbjct:  314 SPRQVVESVMKALRNVDEPYPLHGAEVAVRFCSPTNKASQLSPQAFATYLNEPWYAILTEWDEM 377          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6248.13819.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FII9_ECTSI1.060e-9966.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7R9YD20_9STRA2.640e-1329.31Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S4ALD3_9STRA2.770e-635.29Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S0K9M8_9STRA5.750e-631.54Hypothetical protein n=1 Tax=Leptocylindrus aporus... [more]
A0A7S2NRG0_9EUKA2.070e-542.19Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6248contigH-elongata_contig6248:298..3950 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6248.13819.1mRNA_H-elongata_contig6248.13819.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6248 265..4511 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6248.13819.1 ID=prot_H-elongata_contig6248.13819.1|Name=mRNA_H-elongata_contig6248.13819.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=270bp
MAGLSHQRHAGLVRRRSFTRSASDGEADNILGESSKSEEQEETAWRGDMS
EADDAPELTKEFYEEVAMRWNTTVEGAMEVEKDIQFDKAIYDELRTRRDY
GFEQDLGLELERRNITTKAEVAKIVEKGLEALPGVTSGSTFTPSSELTPR
EVVNSVLEALKNNDNPYRNHGVEVFIRFLSPSSAMKGVEMEGVARYLGEN
RNRALMHWDAIAYPRPLTLSGGEKKNKAFQPLKLQDTMTGSWHSVSVYMT
LDAKTNHWLIESIIMKGDL*
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