prot_H-elongata_contig62408.13813.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig62408.13813.1
Unique Nameprot_H-elongata_contig62408.13813.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length103
Homology
BLAST of mRNA_H-elongata_contig62408.13813.1 vs. uniprot
Match: A0A6H5L3W0_9PHAE (Ubiquitin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L3W0_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 4.320e-46
Identity = 81/89 (91.01%), Postives = 82/89 (92.13%), Query Frame = 0
Query:    1 MQLFVKTLTGKTVTVDVEPGDSIETLKHKIQEKEGIPADQQRIIFGGKQLSGADKQLSDFELEEGNTLHLVLRLRGGPRHLAHDPSLSR 89
            MQLFVKTLTGKTVTVDVEPGDSIETLKHKIQEKEGIPA+QQRIIFGGKQLSGADKQLSDFELEEGNTLHLVLRLRGGP      PSL R
Sbjct:   71 MQLFVKTLTGKTVTVDVEPGDSIETLKHKIQEKEGIPAEQQRIIFGGKQLSGADKQLSDFELEEGNTLHLVLRLRGGPEDDV--PSLRR 157          
BLAST of mRNA_H-elongata_contig62408.13813.1 vs. uniprot
Match: A0A835Z7X2_9STRA (Ubiquitin-related domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7X2_9STRA)

HSP 1 Score: 140 bits (354), Expect = 7.310e-41
Identity = 68/79 (86.08%), Postives = 74/79 (93.67%), Query Frame = 0
Query:    1 MQLFVKTLTGKTVTVDVEPGDSIETLKHKIQEKEGIPADQQRIIFGGKQLSGADKQLSDFELEEGNTLHLVLRLRGGPR 79
            MQLFVKTLTGKTV+VDV+PGDSIETLKHKIQEKEGIP DQQRIIFGGKQL G +K L DF+LE+G+TLHLVLRLRGGPR
Sbjct:   61 MQLFVKTLTGKTVSVDVDPGDSIETLKHKIQEKEGIPPDQQRIIFGGKQLQGGEKTLGDFDLEDGSTLHLVLRLRGGPR 139          
BLAST of mRNA_H-elongata_contig62408.13813.1 vs. uniprot
Match: A0A482SAK0_9ARCH (Ubiquitin-like domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SAK0_9ARCH)

HSP 1 Score: 114 bits (284), Expect = 6.140e-31
Identity = 56/77 (72.73%), Postives = 68/77 (88.31%), Query Frame = 0
Query:    1 MQLFVKTLTGKTVTVDVEPGDSIETLKHKIQEKEGIPADQQRIIFGGKQLSGADKQLSDFELEEGNTLHLVLRLRGG 77
            MQ+FVKTLTGKT++VDVEP +SIE+LK KIQEKEG+P DQQRIIFGGKQL    K LSD+++++ +TLHLVLRLRGG
Sbjct:    1 MQVFVKTLTGKTISVDVEPDESIESLKAKIQEKEGVPPDQQRIIFGGKQLDNL-KSLSDYDIDDDSTLHLVLRLRGG 76          
BLAST of mRNA_H-elongata_contig62408.13813.1 vs. uniprot
Match: A0A2N7YWR8_9PSED (Ubiquitin-like domain-containing protein n=2 Tax=Pseudomonas TaxID=286 RepID=A0A2N7YWR8_9PSED)

HSP 1 Score: 110 bits (276), Expect = 6.240e-30
Identity = 53/77 (68.83%), Postives = 65/77 (84.42%), Query Frame = 0
Query:    1 MQLFVKTLTGKTVTVDVEPGDSIETLKHKIQEKEGIPADQQRIIFGGKQLSGADKQLSDFELEEGNTLHLVLRLRGG 77
            MQ+FVKTLTGKT+T+DVEP DS+E  K+KIQ+KEGIP DQQR+IF GKQL    + +SD+ + EG+TLHLVLRLRGG
Sbjct:    1 MQVFVKTLTGKTITLDVEPADSVEIFKNKIQDKEGIPPDQQRLIFAGKQLEDG-RTISDYNIHEGSTLHLVLRLRGG 76          
BLAST of mRNA_H-elongata_contig62408.13813.1 vs. uniprot
Match: A0A665VTU1_ECHNA (Ubiquitin-like domain-containing protein n=1 Tax=Echeneis naucrates TaxID=173247 RepID=A0A665VTU1_ECHNA)

HSP 1 Score: 110 bits (274), Expect = 1.930e-29
Identity = 56/88 (63.64%), Postives = 70/88 (79.55%), Query Frame = 0
Query:    1 MQLFVKTLTGKTVTVDVEPGDSIETLKHKIQEKEGIPADQQRIIFGGKQLSGADKQLSDFELEEGNTLHLVLRLRGGPRHL-AHDPSL 87
            MQ+FVKTLTGKT+T++VEP D+IE +K KIQ+KEGIP DQQR+IF GKQL    + LSD+ +++ +TLHLVLRLRG P H  A  PSL
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG-RTLSDYNIQKESTLHLVLRLRGAPNHRWASKPSL 87          
BLAST of mRNA_H-elongata_contig62408.13813.1 vs. uniprot
Match: A0A068WVL5_ECHGR (Ubiquitin ribosomal protein L40 n=2 Tax=Echinococcus TaxID=6209 RepID=A0A068WVL5_ECHGR)

HSP 1 Score: 109 bits (273), Expect = 1.940e-29
Identity = 53/80 (66.25%), Postives = 67/80 (83.75%), Query Frame = 0
Query:    1 MQLFVKTLTGKTVTVDVEPGDSIETLKHKIQEKEGIPADQQRIIFGGKQLSGADKQLSDFELEEGNTLHLVLRLRGGPRH 80
            MQ+FVKTLTGKT+T++VEP DSIE +K KIQ+KEGIP DQQR+IF GKQL    + LSD+ +++ +TLHLVLRLRGG +H
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG-RTLSDYNIQKESTLHLVLRLRGGMKH 79          
BLAST of mRNA_H-elongata_contig62408.13813.1 vs. uniprot
Match: A0A482T4Z2_9ARCH (Ubiquitin-like domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T4Z2_9ARCH)

HSP 1 Score: 110 bits (274), Expect = 2.360e-29
Identity = 56/94 (59.57%), Postives = 72/94 (76.60%), Query Frame = 0
Query:    1 MQLFVKTLTGKTVTVDVEPGDSIETLKHKIQEKEGIPADQQRIIFGGKQLSGADKQLSDFELEEGNTLHLVLRLRGGPRHLAHDPSLSRCSAWF 94
            MQ+FVKTLTGKT+T+DVEP DSI+ +K KIQ+KEGIP DQQR+IF GKQL    + LSD+ +++ +TLHLVLRLRGG      DP+L+  +  F
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDG-RTLSDYNIQKESTLHLVLRLRGG----VFDPTLAALAKTF 89          
BLAST of mRNA_H-elongata_contig62408.13813.1 vs. uniprot
Match: C4V737_NOSCE (Ubiquitin-like domain-containing protein n=8 Tax=root TaxID=1 RepID=C4V737_NOSCE)

HSP 1 Score: 109 bits (272), Expect = 2.610e-29
Identity = 53/77 (68.83%), Postives = 66/77 (85.71%), Query Frame = 0
Query:    1 MQLFVKTLTGKTVTVDVEPGDSIETLKHKIQEKEGIPADQQRIIFGGKQLSGADKQLSDFELEEGNTLHLVLRLRGG 77
            MQ+FVKTLTGKT+T+DVEPGDSIE +K KIQ+KEGIP DQQR+IF GKQL    + L+D+ +++ +TLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPGDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG-RTLNDYNIQKESTLHLVLRLRGG 76          
BLAST of mRNA_H-elongata_contig62408.13813.1 vs. uniprot
Match: A0A6C0BJE7_9ZZZZ (Ubiquitin-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0BJE7_9ZZZZ)

HSP 1 Score: 112 bits (279), Expect = 3.020e-29
Identity = 54/77 (70.13%), Postives = 67/77 (87.01%), Query Frame = 0
Query:    1 MQLFVKTLTGKTVTVDVEPGDSIETLKHKIQEKEGIPADQQRIIFGGKQLSGADKQLSDFELEEGNTLHLVLRLRGG 77
            MQ+FVKTLTGKT+T+DVEP DSIE++K KIQ+KEGIP DQQR+IF GKQL   D+ LSD+ +++ +TLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDSIESIKQKIQDKEGIPPDQQRLIFAGKQLED-DRTLSDYNIQKESTLHLVLRLRGG 76          
BLAST of mRNA_H-elongata_contig62408.13813.1 vs. uniprot
Match: W7TN89_9STRA (Ubiquitin n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TN89_9STRA)

HSP 1 Score: 112 bits (280), Expect = 4.040e-29
Identity = 57/94 (60.64%), Postives = 73/94 (77.66%), Query Frame = 0
Query:    1 MQLFVKTLTGKTVTVDVEPGDSIETLKHKIQEKEGIPADQQRIIFGGKQLSGADKQLSDFELEEGNTLHLVLRLRGGPRHLAHDPSLSRCSAWF 94
            MQ+FVKTLTGKT+T+DVEP D+IE +K KIQ+KEGIP DQQR+IF GKQL    + LSD+ +++ +TLHLVLRLRGG     +DPSL+  +  F
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDG-RTLSDYNIQKESTLHLVLRLRGG----VYDPSLAALAKTF 89          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62408.13813.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L3W0_9PHAE4.320e-4691.01Ubiquitin-like domain-containing protein n=2 Tax=E... [more]
A0A835Z7X2_9STRA7.310e-4186.08Ubiquitin-related domain-containing protein n=2 Ta... [more]
A0A482SAK0_9ARCH6.140e-3172.73Ubiquitin-like domain-containing protein n=1 Tax=a... [more]
A0A2N7YWR8_9PSED6.240e-3068.83Ubiquitin-like domain-containing protein n=2 Tax=P... [more]
A0A665VTU1_ECHNA1.930e-2963.64Ubiquitin-like domain-containing protein n=1 Tax=E... [more]
A0A068WVL5_ECHGR1.940e-2966.25Ubiquitin ribosomal protein L40 n=2 Tax=Echinococc... [more]
A0A482T4Z2_9ARCH2.360e-2959.57Ubiquitin-like domain-containing protein n=1 Tax=a... [more]
C4V737_NOSCE2.610e-2968.83Ubiquitin-like domain-containing protein n=8 Tax=r... [more]
A0A6C0BJE7_9ZZZZ3.020e-2970.13Ubiquitin-like domain-containing protein n=1 Tax=v... [more]
W7TN89_9STRA4.040e-2960.64Ubiquitin n=2 Tax=Monodopsidaceae TaxID=425072 Rep... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019956UbiquitinPRINTSPR00348UBIQUITINcoord: 32..52
score: 68.88
coord: 11..31
score: 53.37
IPR000626Ubiquitin domainSMARTSM00213ubq_7coord: 1..73
e-value: 2.2E-23
score: 93.7
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 3..75
e-value: 9.0E-26
score: 89.4
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 1..77
score: 25.444
NoneNo IPR availableGENE3D3.10.20.90coord: 1..89
e-value: 9.4E-34
score: 117.3
NoneNo IPR availablePANTHERPTHR10666:SF302UBIQUITIN-40S RIBOSOMAL PROTEIN S31-RELATEDcoord: 1..82
NoneNo IPR availablePANTHERPTHR10666UBIQUITINcoord: 1..82
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 1..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig62408contigH-elongata_contig62408:1822..2775 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig62408.13813.1mRNA_H-elongata_contig62408.13813.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig62408 396..2797 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig62408.13813.1 ID=prot_H-elongata_contig62408.13813.1|Name=mRNA_H-elongata_contig62408.13813.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=103bp
MQLFVKTLTGKTVTVDVEPGDSIETLKHKIQEKEGIPADQQRIIFGGKQL
SGADKQLSDFELEEGNTLHLVLRLRGGPRHLAHDPSLSRCSAWFPKACAD
GA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019956Ubiquitin
IPR000626Ubiquitin_dom
IPR029071Ubiquitin-like_domsf