prot_H-elongata_contig62400.13811.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig62400.13811.1 vs. uniprot
Match: A0A6A4DAE2_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4DAE2_9STRA) HSP 1 Score: 162 bits (409), Expect = 5.130e-46 Identity = 93/221 (42.08%), Postives = 140/221 (63.35%), Query Frame = 0
Query: 4 IGFEQGKANPCVFCKVADGEAEVVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKNMGNARYYMGCHITRNRKARELKIDQPLYVESMVEKFNVKKGSKIPATSGVPT--LSKADEPRNPKEKEEMKTFPYREAVGALMWTATMTRPDIASAVRAVDRFFENSGPAHKKAVMKIMQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGVCLDTRRSVSGAVL 222
+GFE A+PCV+ + +GE E +V ++VDD+L ++ KA + A + +KF++K++G AR+ +G I + + R L I Q Y ES+++KF ++ +K T P L+KADEP+ ++K +MK+ PYR VG+LM+ A TRPDI+ AV + RF EN G H A +K+++YLL TKD GI Y G G +E Y+D+D+ D RRSVSG +L
Sbjct: 1 MGFEPADADPCVYTR-GEGEDECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFG-QENAKPCLTPPEPAVQLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEGYSDADWAGNRDDRRSVSGMLL 218
BLAST of mRNA_H-elongata_contig62400.13811.1 vs. uniprot
Match: A0A6A4F359_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4F359_9STRA) HSP 1 Score: 165 bits (418), Expect = 1.140e-45 Identity = 96/222 (43.24%), Postives = 141/222 (63.51%), Query Frame = 0
Query: 3 AIGFEQGKANPCVFCKVADGEAEVVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKNMGNARYYMGCHITRNRKARELKIDQPLYVESMVEKFNVK--KGSKIPATSGVPTLSKADEPRNPKEKEEMKTFPYREAVGALMWTATMTRPDIASAVRAVDRFFENSGPAHKKAVMKIMQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGVCLDTRRSVSGAVL 222
++GFE A+PCV+ + +GE E +V ++VDD+L ++ KA + A + +KF++K+MG AR+ +G I + + R L I Q Y ES+++KF + K P GV L+KADEP+ ++K +MK+ PYR VG+LM+ A TRPDI+ AV + RF EN G H A +K+++YLL TKD GI Y G G +EAY+D+D+ D RRSVSG +L
Sbjct: 50 SMGFEPADADPCVYTR-GEGEDECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-QLTKADEPQIEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRRSVSGMLL 268
BLAST of mRNA_H-elongata_contig62400.13811.1 vs. uniprot
Match: A0A6G0MK94_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=17 Tax=Phytophthora TaxID=4783 RepID=A0A6G0MK94_9STRA) HSP 1 Score: 164 bits (415), Expect = 5.970e-45 Identity = 93/224 (41.52%), Postives = 141/224 (62.95%), Query Frame = 0
Query: 1 MAAIGFEQGKANPCVFCKVADGEAEVVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKNMGNARYYMGCHITRNRKARELKIDQPLYVESMVEKFNVKKGSK--IPATSGVPTLSKADEPRNPKEKEEMKTFPYREAVGALMWTATMTRPDIASAVRAVDRFFENSGPAHKKAVMKIMQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGVCLDTRRSVSGAVL 222
+ ++GFE A+PCV+ + +GE E +V ++VDD+L ++ KA + A + +KF++K++G AR+ +G I + + R L I Q Y ES+++KF + P GV L+KADEP+ ++K +MK+ PYR VG+LM+ A TRPDI+ AV + RF EN G H A +K+++YLL TKD GI Y G G +EAY+D+++ D RRSVSG +L
Sbjct: 79 LKSMGFEPADADPCVYTR-GEGEGECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPWLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDANWAGNRDDRRSVSGMLL 299
BLAST of mRNA_H-elongata_contig62400.13811.1 vs. uniprot
Match: A0A6A3HKQ8_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3HKQ8_9STRA) HSP 1 Score: 162 bits (411), Expect = 7.470e-45 Identity = 94/224 (41.96%), Postives = 140/224 (62.50%), Query Frame = 0
Query: 1 MAAIGFEQGKANPCVFCKVADGEAEVVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKNMGNARYYMGCHITRNRKARELKIDQPLYVESMVEKFNVK--KGSKIPATSGVPTLSKADEPRNPKEKEEMKTFPYREAVGALMWTATMTRPDIASAVRAVDRFFENSGPAHKKAVMKIMQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGVCLDTRRSVSGAVL 222
+ ++GFE A+PCV+ + +GE E +V ++VDD+L ++ K + A + +KF++K++G AR+ +G I + + R L I Q Y ES+++KF + K P GV L+KADEP+ + K +MK+ PYR VG+LM+ A TRPDI+ AV + RF EN G H A +K+++YLL TKD GI Y G G +EAY+D+D+ D RRSVSG +L
Sbjct: 79 LKSMGFEPADADPCVYTR-GEGEDECIVCLYVDDMLIASRQKTVIASVKAGIAEKFRIKDLGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-QLTKADEPQTEEVKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRRSVSGMLL 299
BLAST of mRNA_H-elongata_contig62400.13811.1 vs. uniprot
Match: A0A6A3VCN8_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3VCN8_9STRA) HSP 1 Score: 162 bits (410), Expect = 1.030e-44 Identity = 95/224 (42.41%), Postives = 141/224 (62.95%), Query Frame = 0
Query: 1 MAAIGFEQGKANPCVFCKVADGEAEVVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKNMGNARYYMGCHITRNRKARELKIDQPLYVESMVEKFNVK--KGSKIPATSGVPTLSKADEPRNPKEKEEMKTFPYREAVGALMWTATMTRPDIASAVRAVDRFFENSGPAHKKAVMKIMQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGVCLDTRRSVSGAVL 222
+ ++GFE A+PCV+ + +GE E +V ++VDD+L ++ KA + A + +KF++K+MG AR+ + I + + R L I Q Y ES+++KF + K P GV L+KADEP+ ++K +MK+ PYR VG+LM+ A TRPDI+ AV + RF EN G H A +K+++YLL TKD GI Y G G +EAY+D+D+ D RRSVSG +L
Sbjct: 24 LKSMGFEPADADPCVYTR-GEGEDECIVRLYVDDMLIASRQKAVIASEKAGIAEKFRIKDMGRARFILSIEIDYDIERRTLGISQKAYTESIIKKFGQENTKPCLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRRSVSGMLL 244
BLAST of mRNA_H-elongata_contig62400.13811.1 vs. uniprot
Match: A0A6A3V7V5_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3V7V5_9STRA) HSP 1 Score: 159 bits (401), Expect = 8.260e-44 Identity = 93/224 (41.52%), Postives = 141/224 (62.95%), Query Frame = 0
Query: 1 MAAIGFEQGKANPCVFCKVADGEAEVVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKNMGNARYYMGCHITRNRKARELKIDQPLYVESMVEKFNVK--KGSKIPATSGVPTLSKADEPRNPKEKEEMKTFPYREAVGALMWTATMTRPDIASAVRAVDRFFENSGPAHKKAVMKIMQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGVCLDTRRSVSGAVL 222
+ ++GFE A+PCV+ + +G+ E +V ++VDD+L ++ KA + A + +KF++K++G AR+ +G I + + R L I Q Y ES+++KF + K P GV L+KADEP+ E+ +MK+ PYR VG+LM+ A TRPDI+ AV + RF EN G H A +K+++YLL TKD GI Y G G +EAY+++D+ D RRSVSG +L
Sbjct: 79 LKSMGFEPADADPCVYTR-GEGDDECIVCLYVDDMLIASRQKAVIASVKARIAEKFRIKDLGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGRENAKPCLTPLEPGV-NLTKADEPQT--EEAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSNADWAGNRDDRRSVSGMLL 297
BLAST of mRNA_H-elongata_contig62400.13811.1 vs. uniprot
Match: A0A6A3L5P5_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=20 Tax=Phytophthora TaxID=4783 RepID=A0A6A3L5P5_9STRA) HSP 1 Score: 161 bits (407), Expect = 8.940e-44 Identity = 93/224 (41.52%), Postives = 141/224 (62.95%), Query Frame = 0
Query: 1 MAAIGFEQGKANPCVFCKVADGEAEVVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKNMGNARYYMGCHITRNRKARELKIDQPLYVESMVEKFNVK--KGSKIPATSGVPTLSKADEPRNPKEKEEMKTFPYREAVGALMWTATMTRPDIASAVRAVDRFFENSGPAHKKAVMKIMQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGVCLDTRRSVSGAVL 222
+ ++GFE A+PCV+ + +GE E +V ++VDD+L ++ KA + A + +KF++K++G AR+ +G I + + R L I Q Y ES+++KF + K P GV L+K DEP+ ++ ++MK+ PYR VG+LM+ A TRPDI+ AV + RF EN G H A +K+++YLL TKD GI Y G G +EAY+D+D+ D RRSVSG +L
Sbjct: 79 LKSMGFEPADADPCVYTR-GEGEDECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFILGIEIDYDMERRTLGIIQKAYTESIIKKFGQENAKPCLAPLEPGV-QLTKGDEPQTEEDIDKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRRSVSGMLL 299
BLAST of mRNA_H-elongata_contig62400.13811.1 vs. uniprot
Match: A0A6A3Q908_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Q908_9STRA) HSP 1 Score: 164 bits (414), Expect = 1.080e-43 Identity = 95/224 (42.41%), Postives = 140/224 (62.50%), Query Frame = 0
Query: 1 MAAIGFEQGKANPCVFCKVADGEAEVVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKNMGNARYYMGCHITRNRKARELKIDQPLYVESMVEKFNVK--KGSKIPATSGVPTLSKADEPRNPKEKEEMKTFPYREAVGALMWTATMTRPDIASAVRAVDRFFENSGPAHKKAVMKIMQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGVCLDTRRSVSGAVL 222
+ + GFE A+PCV+ + +GE E +V ++VDD+L ++ KA + A + +KF++K++G AR+ +G I + + R L I Q Y ES+++KF + K P GV L+KADEP+ ++K +MK+ PYR VG+LM+ A TRPDI+ AV + RF EN G H A +K+++YLL TKD GI Y G G EAY+D+D+ D RRSVSG +L
Sbjct: 240 LKSTGFEPADADPCVYTR-GEGEGECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFIVGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQPEAYSDADWAGNRDDRRSVSGMLL 460
BLAST of mRNA_H-elongata_contig62400.13811.1 vs. uniprot
Match: A0A2P4YNZ8_9STRA (Retrovirus-related pol Polyprotein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YNZ8_9STRA) HSP 1 Score: 157 bits (397), Expect = 1.120e-43 Identity = 89/224 (39.73%), Postives = 142/224 (63.39%), Query Frame = 0
Query: 1 MAAIGFEQGKANPCVFCKVADGEAEVVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKNMGNARYYMGCHITRNRKARELKIDQPLYVESMVEKFNVKKGSKIPATSGVPT--LSKADEPRNPKEKEEMKTFPYREAVGALMWTATMTRPDIASAVRAVDRFFENSGPAHKKAVMKIMQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGVCLDTRRSVSGAVL 222
+ +GF+ G A PCV+ + +G++E +V ++VDD+L +++K + A + +KF++K++G AR+ +G I + + + L I Q Y E ++ KF ++ +K TS P+ L+KADEP+N +K +MK+ PYR VG+LM+ A TRPDIA AV + R+ EN H A +K+++YL+ TKD ITY G+ G + AY+D+D+ D RRSVSG +L
Sbjct: 5 LKTMGFKAGDAGPCVYTR-GEGDSECIVCLYVDDMLIASREKDIIASVKAGIAEKFRIKDLGRARFILGIEIDYDMERKALTISQRAYTEPIINKFGLE-NAKPSLTSLDPSVHLTKADEPQNADDKAKMKSKPYRSLVGSLMYLACGTRPDIAVAVAKLSRYLENPDHRHWDAGIKVVRYLMKTKDAAITYDGR-MGTELTAYSDADWAGNRDDRRSVSGVML 225
BLAST of mRNA_H-elongata_contig62400.13811.1 vs. uniprot
Match: A0A6A3HAR6_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=21 Tax=Phytophthora TaxID=4783 RepID=A0A6A3HAR6_9STRA) HSP 1 Score: 160 bits (406), Expect = 1.250e-43 Identity = 93/224 (41.52%), Postives = 140/224 (62.50%), Query Frame = 0
Query: 1 MAAIGFEQGKANPCVFCKVADGEAEVVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKNMGNARYYMGCHITRNRKARELKIDQPLYVESMVEKFNVK--KGSKIPATSGVPTLSKADEPRNPKEKEEMKTFPYREAVGALMWTATMTRPDIASAVRAVDRFFENSGPAHKKAVMKIMQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGVCLDTRRSVSGAVL 222
+ ++GFE A+PCV+ + +GE E +V ++VDD+L ++ KA + A + +KF++K+ G AR+ + I + + R L I Q Y ES+++KF + K P GV L+K+DEP+ ++K +MK+ PYR VG+LM+ A TRPDI+ AV + RF EN G H A +K+++YLL TKD GI Y G G +EAY+D+D+ D RRSVSG +L
Sbjct: 79 LKSVGFEPADADPCVYTR-GEGEDECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDTGRARFILSIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-QLTKSDEPQTEEDKAKMKSRPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWVGNRDDRRSVSGMLL 299 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62400.13811.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig62400.13811.1 ID=prot_H-elongata_contig62400.13811.1|Name=mRNA_H-elongata_contig62400.13811.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=222bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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