prot_H-elongata_contig62379.13809.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig62379.13809.1
Unique Nameprot_H-elongata_contig62379.13809.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length137
Homology
BLAST of mRNA_H-elongata_contig62379.13809.1 vs. uniprot
Match: D8LBR6_ECTSI (Rab-GAP TBC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBR6_ECTSI)

HSP 1 Score: 268 bits (684), Expect = 2.110e-84
Identity = 127/136 (93.38%), Postives = 133/136 (97.79%), Query Frame = 0
Query:    1 MQPGLQRMVLRLEELVQRIDADLHRHVTEQGLLYIQFAFRWMNCLLMRELPLRAVVRAWDTYLTEENGFESFHVYVSAALLCHFSSTIREMDFQTMVMFLQDMPTKEWGEEEVEPLLSQAYILSMLFEGSPNHLGA 136
            MQPGLQRMVLRLEELVQRIDADLHRH+T++GL+YIQFAFRWMNCLLMRELP RAVVRAWDTYL+EENGFESFHVYVSAALLCHFS T+REMDFQTMVMFLQDMPTKEWGEEEVEPLLSQAYILS LFEGSPNHLGA
Sbjct:  492 MQPGLQRMVLRLEELVQRIDADLHRHITDEGLMYIQFAFRWMNCLLMRELPQRAVVRAWDTYLSEENGFESFHVYVSAALLCHFSGTLREMDFQTMVMFLQDMPTKEWGEEEVEPLLSQAYILSTLFEGSPNHLGA 627          
BLAST of mRNA_H-elongata_contig62379.13809.1 vs. uniprot
Match: A0A836C8P8_9STRA (Rab-GTPase-TBC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8P8_9STRA)

HSP 1 Score: 205 bits (521), Expect = 1.310e-62
Identity = 99/135 (73.33%), Postives = 113/135 (83.70%), Query Frame = 0
Query:    1 MQPGLQRMVLRLEELVQRIDADLHRHVTEQGLLYIQFAFRWMNCLLMRELPLRAVVRAWDTYLTEENG-FESFHVYVSAALLCHFSSTIREMDFQTMVMFLQDMPTKEWGEEEVEPLLSQAYILSMLFEGSPNHL 134
            MQPGLQRMVLRLEELV+RID DLH H+  +G+ +IQFAFRWMNCLLMRELPL A+VRAWDTYL+EE+G FESFHVYV AALLC FS  +  +DF  +V+FLQDMPT+ W E +VEPLLSQAYILS LFE S  HL
Sbjct:  247 MQPGLQRMVLRLEELVRRIDLDLHAHLAAEGVQFIQFAFRWMNCLLMRELPLPAIVRAWDTYLSEEDGGFESFHVYVCAALLCKFSPALLRLDFAALVLFLQDMPTRAWSEADVEPLLSQAYILSTLFENSSAHL 381          
BLAST of mRNA_H-elongata_contig62379.13809.1 vs. uniprot
Match: A0A485K1X5_9STRA (Aste57867_171 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K1X5_9STRA)

HSP 1 Score: 190 bits (483), Expect = 3.070e-58
Identity = 85/134 (63.43%), Postives = 109/134 (81.34%), Query Frame = 0
Query:    2 QPGLQRMVLRLEELVQRIDADLHRHVTE-QGLLYIQFAFRWMNCLLMRELPLRAVVRAWDTYLTEENGFESFHVYVSAALLCHFSSTIREMDFQTMVMFLQDMPTKEWGEEEVEPLLSQAYILSMLFEGSPNHL 134
            QPGLQRMV R+E+LV+R D+DL+ H+ E + + ++QFAFRWMNCLLMRE PL  +VR WDTYL E+NGFESFHVYV AA+L  F  T++EM FQ +V+FLQ +PTK+WGEE++EPLLS+AYIL   F  +PNH+
Sbjct:  136 QPGLQRMVQRMEDLVRRCDSDLYTHIVETEQVQFVQFAFRWMNCLLMRECPLNGIVRLWDTYLCEDNGFESFHVYVCAAILMTFGDTLKEMQFQDLVLFLQSLPTKDWGEEDIEPLLSRAYILQTYFADAPNHI 269          
BLAST of mRNA_H-elongata_contig62379.13809.1 vs. uniprot
Match: A0A397EK96_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EK96_9STRA)

HSP 1 Score: 183 bits (465), Expect = 5.220e-57
Identity = 83/133 (62.41%), Postives = 105/133 (78.95%), Query Frame = 0
Query:    3 PGLQRMVLRLEELVQRIDADLHRHVTE-QGLLYIQFAFRWMNCLLMRELPLRAVVRAWDTYLTEENGFESFHVYVSAALLCHFSSTIREMDFQTMVMFLQDMPTKEWGEEEVEPLLSQAYILSMLFEGSPNHL 134
            PGLQRMV R+E+LV+R D DLH H+ E + + ++QFAFRWMNCLLMRE PL A+VR WDTYL EE+GFESFHVYV AA+L  F   ++EM FQ +V+FLQ +PT EW E+++EPLLS+AYIL   F  +PNH+
Sbjct:   25 PGLQRMVQRMEDLVRRCDGDLHGHIVETEQVQFVQFAFRWMNCLLMRECPLGAIVRLWDTYLCEESGFESFHVYVCAAILMTFGDQLKEMQFQDLVLFLQKLPTNEWAEDDIEPLLSRAYILQTYFADAPNHI 157          
BLAST of mRNA_H-elongata_contig62379.13809.1 vs. uniprot
Match: A0A418B9J9_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B9J9_9STRA)

HSP 1 Score: 188 bits (477), Expect = 8.390e-57
Identity = 84/134 (62.69%), Postives = 107/134 (79.85%), Query Frame = 0
Query:    2 QPGLQRMVLRLEELVQRIDADLHRHVTE-QGLLYIQFAFRWMNCLLMRELPLRAVVRAWDTYLTEENGFESFHVYVSAALLCHFSSTIREMDFQTMVMFLQDMPTKEWGEEEVEPLLSQAYILSMLFEGSPNHL 134
            QPGLQRMV R+E+LV+R DADLH H+ E + + ++QFAFRWMNCLLMRE PL A++R WDTYL E+NGFESFHVYV AA+L  F   +++M FQ +V+FLQ +PT EWGE ++EPLLS+AYIL   F  +PNH+
Sbjct:  179 QPGLQRMVQRMEDLVRRCDADLHGHIVETEQVQFVQFAFRWMNCLLMRECPLNAIIRLWDTYLCEDNGFESFHVYVCAAILMTFGDALKDMPFQDLVLFLQKLPTNEWGEHDIEPLLSRAYILQTYFADAPNHI 312          
BLAST of mRNA_H-elongata_contig62379.13809.1 vs. uniprot
Match: A0A7S4ASK8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ASK8_9STRA)

HSP 1 Score: 180 bits (457), Expect = 1.220e-55
Identity = 84/135 (62.22%), Postives = 103/135 (76.30%), Query Frame = 0
Query:    2 QPGLQRMVLRLEELVQRIDADLHRHVTEQGLLYIQFAFRWMNCLLMRELPLRAVVRAWDTYLTEE--NGFESFHVYVSAALLCHFSSTIREMDFQTMVMFLQDMPTKEWGEEEVEPLLSQAYILSMLFEGSPNHL 134
            QPG+QRMV+RLEELV RID DL+ H+   G+ ++QFAF+WMNCLL+RE  LR VVR WDTY++EE  NGFE FHVYV AA L  FSS ++EMDF  +  F+Q +PT +WGE E+E LLS AY+L  LFEGS  HL
Sbjct:   26 QPGVQRMVMRLEELVNRIDGDLYNHIHSVGIQFMQFAFKWMNCLLLREFNLRCVVRLWDTYISEESGNGFEDFHVYVCAAFLSQFSSQLQEMDFDELFQFMQQVPTDDWGETEIEMLLSHAYVLRSLFEGSDAHL 160          
BLAST of mRNA_H-elongata_contig62379.13809.1 vs. uniprot
Match: A0A024G9G9_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G9G9_9STRA)

HSP 1 Score: 189 bits (479), Expect = 1.940e-55
Identity = 83/134 (61.94%), Postives = 111/134 (82.84%), Query Frame = 0
Query:    2 QPGLQRMVLRLEELVQRIDADLHRHVTE-QGLLYIQFAFRWMNCLLMRELPLRAVVRAWDTYLTEENGFESFHVYVSAALLCHFSSTIREMDFQTMVMFLQDMPTKEWGEEEVEPLLSQAYILSMLFEGSPNHL 134
            QPGLQRMV R+E+LV R D+DL++H+ E + + ++QFAFRWMNCLLMRE+PL+A+VR WDTYL E+NGFESFHVYV AA+L  F   ++EM+FQ +V+FLQ +PTK+W EE+++PLLS+A+IL   F  +PNHL
Sbjct:  338 QPGLQRMVQRMEDLVNRCDSDLYKHIVEKEAVQFVQFAFRWMNCLLMREIPLQAIVRVWDTYLCEDNGFESFHVYVCAAILMTFGEKLKEMEFQELVLFLQSLPTKDWTEEQIDPLLSRAFILQTYFADAPNHL 471          
BLAST of mRNA_H-elongata_contig62379.13809.1 vs. uniprot
Match: A0A067D1T9_SAPPC (Rab-GAP TBC domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D1T9_SAPPC)

HSP 1 Score: 187 bits (476), Expect = 2.060e-55
Identity = 83/134 (61.94%), Postives = 109/134 (81.34%), Query Frame = 0
Query:    2 QPGLQRMVLRLEELVQRIDADLHRHVTE-QGLLYIQFAFRWMNCLLMRELPLRAVVRAWDTYLTEENGFESFHVYVSAALLCHFSSTIREMDFQTMVMFLQDMPTKEWGEEEVEPLLSQAYILSMLFEGSPNHL 134
            QPGLQRMV R+E+LV+R DADL+ H+ E + + ++QFAFRWMNCLLMRE PL A++R WDTYL E+NGFE+FHVYV AA+L  F   ++EM+FQ +V+FLQ +PTKEW E+++EPLLS+AYIL   F  +PNH+
Sbjct:  289 QPGLQRMVQRMEDLVKRCDADLYTHIVETESVQFVQFAFRWMNCLLMRECPLHAIIRLWDTYLCEDNGFENFHVYVCAAILMTFGDMLKEMEFQDLVLFLQSLPTKEWEEDDIEPLLSRAYILQTYFADAPNHI 422          
BLAST of mRNA_H-elongata_contig62379.13809.1 vs. uniprot
Match: A0A024USL6_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024USL6_9STRA)

HSP 1 Score: 188 bits (477), Expect = 2.610e-55
Identity = 84/134 (62.69%), Postives = 107/134 (79.85%), Query Frame = 0
Query:    2 QPGLQRMVLRLEELVQRIDADLHRHVTE-QGLLYIQFAFRWMNCLLMRELPLRAVVRAWDTYLTEENGFESFHVYVSAALLCHFSSTIREMDFQTMVMFLQDMPTKEWGEEEVEPLLSQAYILSMLFEGSPNHL 134
            QPGLQRMV R+E+LV+R DADLH H+ E + + ++QFAFRWMNCLLMRE PL A++R WDTYL E+NGFESFHVYV AA+L  F   +++M FQ +V+FLQ +PT EWGE ++EPLLS+AYIL   F  +PNH+
Sbjct:  318 QPGLQRMVQRMEDLVRRCDADLHGHIVETEQVQFVQFAFRWMNCLLMRECPLNAIIRLWDTYLCEDNGFESFHVYVCAAILMTFGDALKDMPFQDLVLFLQKLPTNEWGEHDIEPLLSRAYILQTYFADAPNHI 451          
BLAST of mRNA_H-elongata_contig62379.13809.1 vs. uniprot
Match: A0A1V9ZQ56_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZQ56_9STRA)

HSP 1 Score: 187 bits (475), Expect = 2.830e-55
Identity = 82/134 (61.19%), Postives = 110/134 (82.09%), Query Frame = 0
Query:    2 QPGLQRMVLRLEELVQRIDADLHRHVTE-QGLLYIQFAFRWMNCLLMRELPLRAVVRAWDTYLTEENGFESFHVYVSAALLCHFSSTIREMDFQTMVMFLQDMPTKEWGEEEVEPLLSQAYILSMLFEGSPNHL 134
            QPGLQRMV R+E+LV+R DADL+ H+ E + + ++QFAFRWMNCLLMRE PL++++R WDTYL E+NGFE+FH+YV AA+L  F   ++EM+FQ +V+FLQ +PTKEW EE++EPLLS+AYIL   F  +PNH+
Sbjct:  291 QPGLQRMVQRMEDLVRRCDADLYSHIVEKEQVQFVQFAFRWMNCLLMRECPLQSIIRLWDTYLCEDNGFENFHIYVCAAILMTFGDALKEMEFQDLVLFLQSLPTKEWEEEDIEPLLSRAYILQTYFADAPNHI 424          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62379.13809.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBR6_ECTSI2.110e-8493.38Rab-GAP TBC domain-containing protein n=2 Tax=Ecto... [more]
A0A836C8P8_9STRA1.310e-6273.33Rab-GTPase-TBC domain-containing protein n=1 Tax=T... [more]
A0A485K1X5_9STRA3.070e-5863.43Aste57867_171 protein n=1 Tax=Aphanomyces stellatu... [more]
A0A397EK96_9STRA5.220e-5762.41Rab-GAP TBC domain-containing protein n=1 Tax=Apha... [more]
A0A418B9J9_9STRA8.390e-5762.69Rab-GAP TBC domain-containing protein n=1 Tax=Apha... [more]
A0A7S4ASK8_9STRA1.220e-5562.22Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A024G9G9_9STRA1.940e-5561.94Rab-GAP TBC domain-containing protein n=1 Tax=Albu... [more]
A0A067D1T9_SAPPC2.060e-5561.94Rab-GAP TBC domain-containing protein n=4 Tax=Sapr... [more]
A0A024USL6_9STRA2.610e-5562.69Rab-GAP TBC domain-containing protein n=1 Tax=Apha... [more]
A0A1V9ZQ56_9STRA2.830e-5561.19Rab-GAP TBC domain-containing protein n=1 Tax=Thra... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 2..86
e-value: 1.6E-17
score: 63.9
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 1..66
score: 14.436
NoneNo IPR availableGENE3D1.10.472.80coord: 1..136
e-value: 2.7E-40
score: 139.2
NoneNo IPR availablePANTHERPTHR22957:SF255TBC1 DOMAIN FAMILY MEMBER 22Acoord: 3..134
NoneNo IPR availablePANTHERPTHR22957TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEINcoord: 3..134
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 2..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig62379contigH-elongata_contig62379:2231..3278 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig62379.13809.1mRNA_H-elongata_contig62379.13809.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig62379 2231..3296 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig62379.13809.1 ID=prot_H-elongata_contig62379.13809.1|Name=mRNA_H-elongata_contig62379.13809.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=137bp
MQPGLQRMVLRLEELVQRIDADLHRHVTEQGLLYIQFAFRWMNCLLMREL
PLRAVVRAWDTYLTEENGFESFHVYVSAALLCHFSSTIREMDFQTMVMFL
QDMPTKEWGEEEVEPLLSQAYILSMLFEGSPNHLGA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
IPR035969Rab-GTPase_TBC_sf