prot_H-elongata_contig62136.13780.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig62136.13780.1
Unique Nameprot_H-elongata_contig62136.13780.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length156
Homology
BLAST of mRNA_H-elongata_contig62136.13780.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY)

HSP 1 Score: 138 bits (347), Expect = 7.810e-35
Identity = 64/155 (41.29%), Postives = 99/155 (63.87%), Query Frame = 0
Query:    1 MGEAQASPEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMSYLEADVEEEIYVELPEAYRDSRKQVGLLKKAMYGLVHSGLLW 155
            + EAQASPEWP+W++A+  E D     G W++ + PK +  +G + VF+RK +K+G++ KYK RLVAQG+ Q+ G+ + E+ +P     SIR +L++     WE  Q+DV  +YL  D++EEIY+  PE + D   ++  L+K +YGL  SG  W
Sbjct:  910 LAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREW 1064          
BLAST of mRNA_H-elongata_contig62136.13780.1 vs. uniprot
Match: A0A0A9Y7J8_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Y7J8_LYGHE)

HSP 1 Score: 121 bits (304), Expect = 5.720e-32
Identity = 63/161 (39.13%), Postives = 96/161 (59.63%), Query Frame = 0
Query:    3 EAQASPEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMSYLEADVEEEIYVELPEAY--------RDSRKQVGLLKKAMYGLVHSGLLW 155
            +A  SP    WK+A+  E +       W +V+RP+GKTV+G+R VF+ K+  DG +E+ K RLVA+GF Q+ G HY E+ +     +SIR V+++ A    E  QLD   +YL  ++EEEIY+E+P+          +D   +V  ++KA+YGL  SG +W
Sbjct:   22 QALESPYAEDWKKAMLEEYNSLEKNKTWTLVDRPEGKTVVGSRWVFRTKLKADGTVERRKARLVAKGFTQIPGTHYNETYTSVARLSSIRFVIALAAERNLELEQLDFTCAYLNGEIEEEIYMEVPKEIETILGRKTQDRENKVSRIQKALYGLKQSGRMW 182          
BLAST of mRNA_H-elongata_contig62136.13780.1 vs. uniprot
Match: A0A5K1K0E1_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ganoderma boninense TaxID=34458 RepID=A0A5K1K0E1_9APHY)

HSP 1 Score: 129 bits (325), Expect = 6.720e-32
Identity = 65/155 (41.94%), Postives = 101/155 (65.16%), Query Frame = 0
Query:    3 EAQASPEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMSYLEADVEEEIYVELPEAYRDSRKQ--VGLLKKAMYGLVHSGLLW 155
            EAQASP+WPQW+RAI  EM+   A G + +V +P G  V+G+++VF RK + +G + + K R+VAQGF Q+ GI + E+ +P    +S+R+++++ A  GW   QLDV  +YL  D++EEIY+  P     + ++  V  LKK++YGL  +G  W
Sbjct:  327 EAQASPDWPQWERAIEVEMENLRAHGTYDLVVKPPGAHVIGSKLVFHRKRNAEGAVTQCKVRVVAQGFAQIPGIDFNETFAPVAKPSSLRVMIALAARFGWPMIQLDVKSAYLNGDLDEEIYMRQPPGTAAAGEEHLVCRLKKSLYGLKQAGRAW 481          
BLAST of mRNA_H-elongata_contig62136.13780.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY)

HSP 1 Score: 129 bits (325), Expect = 7.140e-32
Identity = 67/155 (43.23%), Postives = 100/155 (64.52%), Query Frame = 0
Query:    3 EAQASPEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMSYLEADVEEEIYVELP--EAYRDSRKQVGLLKKAMYGLVHSGLLW 155
            EA  SP+WPQW++AI +EM        + +VE P+   V+G++ VF+ K + +G+IE YK RLVAQGF Q+ GI + ++ +P    ASIR++L++ A   W+  Q+DV  +YL AD+EEEI+++ P  +A R     V LL+ A+YGL  SG  W
Sbjct:  965 EAMQSPDWPQWQKAIEKEMRNLRDHHTYDLVEPPENTNVVGSKFVFRIKRNANGKIESYKARLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNADLEEEIFMKQPPGQAKRGKEHWVCLLRHAIYGLKQSGRQW 1119          
BLAST of mRNA_H-elongata_contig62136.13780.1 vs. uniprot
Match: A0A151RGT1_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RGT1_CAJCA)

HSP 1 Score: 122 bits (307), Expect = 1.250e-31
Identity = 58/145 (40.00%), Postives = 93/145 (64.14%), Query Frame = 0
Query:   13 WKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMSYLEADVEEEIYVELPEAYR--DSRKQVGLLKKAMYGLVHSGLLW 155
            W +A+  EM+       W++V++P+ K  +G R +F  K   DG IE+YK RLVA+G+ Q  GI Y+E+ +P     ++R+VL++ A  GW+  QLDV  ++L  ++EEE+Y+E+P+ ++  + R +V LLKKA+YGL  S   W
Sbjct:    6 WTQAMKEEMNALERNSTWEIVDKPRDKKAIGCRWIFTVKHKADGTIERYKARLVAKGYTQTYGIDYKETFAPVAKMNTVRVVLALTAHFGWDLHQLDVKSAFLHGNLEEEVYMEIPQGFKVQNERNKVCLLKKALYGLTQSLRAW 150          
BLAST of mRNA_H-elongata_contig62136.13780.1 vs. uniprot
Match: A0A6A4ZHD7_9STRA (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZHD7_9STRA)

HSP 1 Score: 128 bits (322), Expect = 1.790e-31
Identity = 66/154 (42.86%), Postives = 98/154 (63.64%), Query Frame = 0
Query:    3 EAQASPEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMSYLEADVEEEIYVELPEAYR-DSRKQVGLLKKAMYGLVHSGLLW 155
            +A AS E  + ++A+ RE+DG    G W+VVERPK   ++  + VFK K D+ G ++K+K RLVA+GF Q  G+ Y  + +P   QAS+R++  + A    E   LD   +YL A  + +IY+ELPE +  D++K VGLL+K +YGL  SG+LW
Sbjct:  881 QAMASKEAIERRKAMMRELDGIVGNGTWEVVERPKHTNIVSHKWVFKVKYDQGGNVDKFKARLVARGFSQRYGVDYSNTYAPVIKQASVRLIYVLAAIFKCEITHLDFPQAYLNAKTDFDIYIELPEGFDVDTKKYVGLLRKGLYGLKQSGMLW 1034          
BLAST of mRNA_H-elongata_contig62136.13780.1 vs. uniprot
Match: A0A5C3E5T1_9BASI (Uncharacterized protein n=2 Tax=Ustilago trichophora TaxID=86804 RepID=A0A5C3E5T1_9BASI)

HSP 1 Score: 128 bits (322), Expect = 1.800e-31
Identity = 63/153 (41.18%), Postives = 97/153 (63.40%), Query Frame = 0
Query:    3 EAQASPEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMSYLEADVEEEIYVELPEAYRDSRKQVGLLKKAMYGLVHSGLLW 155
            EA+  P+WP W+ AI +E+   +  G W + + P G+  +G++ VFK K+  DG ++KYK RLVAQGF Q  G+ Y+E+ +P    A++R+++++ A  GW A Q+DV  +YL  ++EEEIY+  P  Y +  K V  L KA+YGL  +G  W
Sbjct:  835 EAKRRPDWPHWETAIKKELASLSENGTWTLEDLPPGRRAVGSKWVFKIKLKADGTVDKYKARLVAQGFTQQHGVDYDETFAPVLKFATLRLLIALAAQEGWLAHQMDVITAYLNGNLEEEIYMRAPPGYAEGDK-VCRLCKALYGLKQAGRTW 986          
BLAST of mRNA_H-elongata_contig62136.13780.1 vs. uniprot
Match: A0A1M2V8C6_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2V8C6_TRAPU)

HSP 1 Score: 128 bits (322), Expect = 1.810e-31
Identity = 66/155 (42.58%), Postives = 97/155 (62.58%), Query Frame = 0
Query:    3 EAQASPEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMSYLEADVEEEIYVELPE--AYRDSRKQVGLLKKAMYGLVHSGLLW 155
            EAQ +P+WP+W+ AI  EMD   A   + +V RP G  V+G+R+VF RK D DG I++ K R+VAQGF Q+ G+ Y E+ +P    +S+R++L++ A   W   QLDV  +YL  D++EEIY+  P   A +     V  L+K++YGL  +G  W
Sbjct:  993 EAQEAPDWPKWEEAITVEMDNLRAHSTYDLVVRPVGAHVIGSRLVFHRKRDADGSIKQCKVRVVAQGFGQIPGVDYNETFAPVAKSSSLRIMLALAARFSWPLIQLDVKSAYLNGDLDEEIYMRQPPGTAAQGEEHLVCRLRKSLYGLKQAGRAW 1147          
BLAST of mRNA_H-elongata_contig62136.13780.1 vs. uniprot
Match: A0A1M2V3W8_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2V3W8_TRAPU)

HSP 1 Score: 126 bits (317), Expect = 8.130e-31
Identity = 65/155 (41.94%), Postives = 94/155 (60.65%), Query Frame = 0
Query:    1 MGEAQASPEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMSYLEADVEEEIYVELPEAYRDSRKQVGLLKKAMYGLVHSGLLW 155
            + EAQA+PEWP+WKRA+  E+      G +   + P G+  +G R V++ K D DGRI +YK RLVAQGF Q  G+ Y E+ +P     S+R++L++ A    E  Q DV  +YL AD++EEIY+  P  Y +    +  L+KA+YGL  +G  W
Sbjct:   18 LSEAQAAPEWPEWKRAMDDEIAQLRKLGTYAPADLPAGRKPIGCRWVYRLKRDSDGRIVRYKARLVAQGFSQAPGLDYFETFAPVIRTDSLRLLLAIAAERNMELAQFDVVGAYLNADLDEEIYMRQPPGYEEGSSPIVRLRKALYGLKQAGXQW 172          
BLAST of mRNA_H-elongata_contig62136.13780.1 vs. uniprot
Match: A0A177U0B1_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tilletia caries TaxID=13290 RepID=A0A177U0B1_9BASI)

HSP 1 Score: 125 bits (314), Expect = 9.960e-31
Identity = 60/149 (40.27%), Postives = 93/149 (62.42%), Query Frame = 0
Query:    7 SPEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAALGWEARQLDVDMSYLEADVEEEIYVELPEAYRDSRKQVGLLKKAMYGLVHSGLLW 155
            S EW QWK+A+  E+   T  G W +VE   G  ++G+R V+K K+D+DG   +YK RLVAQGF Q +GI ++E+ +P     ++R+V+S+  ALG     +D+  +YL   + EE+Y++ P  Y D   +V LL++A+YGL  +G  W
Sbjct:   34 SAEWAQWKQAMDEEVASLTEMGTWVLVEPRSGHNIVGSRWVYKLKLDRDGNAARYKARLVAQGFTQREGIDFKETFAPVARLVTVRLVISVALALGLHLGSIDIKTAYLNGKLHEEVYMQQPPEYDDGTGRVCLLRRAIYGLKQAGRAW 182          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62136.13780.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A401GYH9_9APHY7.810e-3541.29Uncharacterized protein n=6 Tax=Sparassis crispa T... [more]
A0A0A9Y7J8_LYGHE5.720e-3239.13Retrovirus-related Pol polyprotein from transposon... [more]
A0A5K1K0E1_9APHY6.720e-3241.94Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A401GQU1_9APHY7.140e-3243.23Uncharacterized protein n=3 Tax=Sparassis crispa T... [more]
A0A151RGT1_CAJCA1.250e-3140.00Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A4ZHD7_9STRA1.790e-3142.86Integrase catalytic domain-containing protein (Fra... [more]
A0A5C3E5T1_9BASI1.800e-3141.18Uncharacterized protein n=2 Tax=Ustilago trichopho... [more]
A0A1M2V8C6_TRAPU1.810e-3142.58Retrovirus-related Pol polyprotein from transposon... [more]
A0A1M2V3W8_TRAPU8.130e-3141.94Retrovirus-related Pol polyprotein from transposon... [more]
A0A177U0B1_9BASI9.960e-3140.27Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 29..155
e-value: 1.9E-31
score: 109.6
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 11..148
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 11..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig62136contigH-elongata_contig62136:470..937 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig62136.13780.1mRNA_H-elongata_contig62136.13780.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig62136 2..1015 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig62136.13780.1 ID=prot_H-elongata_contig62136.13780.1|Name=mRNA_H-elongata_contig62136.13780.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=156bp
MGEAQASPEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKR
KIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTPAQASIRMVLSMIAA
LGWEARQLDVDMSYLEADVEEEIYVELPEAYRDSRKQVGLLKKAMYGLVH
SGLLW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like