prot_H-elongata_contig62057.13769.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig62057.13769.1
Unique Nameprot_H-elongata_contig62057.13769.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length287
Homology
BLAST of mRNA_H-elongata_contig62057.13769.1 vs. uniprot
Match: A0A6H5JQN7_9PHAE (Kin17_mid domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQN7_9PHAE)

HSP 1 Score: 263 bits (672), Expect = 1.190e-81
Identity = 164/297 (55.22%), Postives = 194/297 (65.32%), Query Frame = 0
Query:    1 RTIEKLVQAARVRDESRGEV-SGPSGPTELRREEGQESLRIGLKTNAATFVPGAGHG--LVSAGETLLSAAA-----------GSGAKRPRVSGAFGQAGDSGGVEMHARNAELKGKGQGKGKKSVMEALMEQERAKKAAKGAQEKALKDGEEKEEKEETGPKQYVGTGGGAADGRKDYWLRGGIVVKVMNKKVGGGKYYKKKGRLRKVVERYIGEVKMLDSGDRLRVDQEDLETVIPAIGGEVVIVNGRCRGARATLVSLDTEAFAASVRITSVGPDTGVLIDGVEYEDICKASPV 283
            R IEK +QAA+ RDE R +  +  +GPTELRREEGQ SLRIGLK+ A TFVPG G G  L +A                    G   KRP++SGAFG+    GG         +KGKG+G  K+SVME +M                      + + +++               RKDYWLR GIVVKVMNK+VGGGKYYKKK RLRKVVERY+GEVKM+DSGDRLRVDQ+DLETVIPA+GGEV++VNGRCRG RATL+SLDTEAF+ASVRITS GPD G ++D VEYEDICKA PV
Sbjct:  205 RAIEKQIQAAKARDEGRADTDAAAAGPTELRREEGQASLRIGLKSRAQTFVPGGGSGSDLTTAXXXXXXXXXXXXXXXXXXXXGGLLKRPKLSGAFGE----GGAXXXXXXGPVKGKGKG-AKRSVMEVMMXXXXXXXXXXXXXXXXXXXXXXEVKAKDSS--------------RKDYWLRQGIVVKVMNKRVGGGKYYKKKARLRKVVERYVGEVKMIDSGDRLRVDQDDLETVIPAVGGEVLVVNGRCRGERATLLSLDTEAFSASVRITSDGPDLGTVLDKVEYEDICKAVPV 482          
BLAST of mRNA_H-elongata_contig62057.13769.1 vs. uniprot
Match: A0A835Z894_9STRA (Antigenic determinant of recA protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z894_9STRA)

HSP 1 Score: 146 bits (368), Expect = 2.800e-37
Identity = 74/123 (60.16%), Postives = 93/123 (75.61%), Query Frame = 0
Query:  157 GAADGRKDYWLRGGIVVKVMNKKVGGGKYYKKKGRLRKVVERYIGEVKMLDSGDRLRVDQEDLETVIPAIGGEVVIVNGRCRGARATLVSLDTEAFAASVRITSVGPDTGVLIDGVEYEDICK 279
            G  D +   WL  GIVVKVMNK+VGGGKYYK KG +R+V+E +I EVKM+D GDRLRVDQ+DLETVIPA+G +V+IVNGRCRG+ A L++LD + F A VR+   GP  G  +  V+YE+I K
Sbjct:  302 GVDDAKLPNWLHAGIVVKVMNKQVGGGKYYKAKGVVRRVIEDFIAEVKMVDGGDRLRVDQDDLETVIPALGKDVLIVNGRCRGSIAELLALDVDNFCARVRVVD-GPQKGTELPKVDYENISK 423          
BLAST of mRNA_H-elongata_contig62057.13769.1 vs. uniprot
Match: A0A6G0WJF6_9STRA (C2H2-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJF6_9STRA)

HSP 1 Score: 138 bits (348), Expect = 1.220e-34
Identity = 71/120 (59.17%), Postives = 92/120 (76.67%), Query Frame = 0
Query:  162 RKDYWLRGGIVVKVMNKKVGGGKYYKKKGRLRKVVERYIGEVKMLDSGDRLRVDQEDLETVIPAIGGEVVIVNGRCRGARATLVSLDTEAFAASVRITSVGPDTGVLIDGVEYEDICKAS 281
            RK+ W+  GI+VKVM+K VG G+YYKKKG++ +VV+ +  +V+MLDSGD LRVDQ+DLETVIP +G  V IVNG  RGA ATL+S+D  +F+ SV ITS GP  G  +D VEYED+CK +
Sbjct:  273 RKENWIHQGIIVKVMDKNVGDGEYYKKKGQVLRVVDTFGAQVRMLDSGDELRVDQDDLETVIPLVGKTVRIVNGIGRGALATLLSIDEASFSVSVLITS-GPKKGRTLDKVEYEDVCKVA 391          
BLAST of mRNA_H-elongata_contig62057.13769.1 vs. uniprot
Match: A0A7S2E1F3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E1F3_9STRA)

HSP 1 Score: 136 bits (343), Expect = 4.470e-34
Identity = 65/120 (54.17%), Postives = 90/120 (75.00%), Query Frame = 0
Query:  162 RKDYWLRGGIVVKVMNKKVGGGKYYKKKGRLRKVVERYIGEVKMLDSGDRLRVDQEDLETVIPAIGGEVVIVNGRCRGARATLVSLDTEAFAASVRITSVGPDTGVLIDGVEYEDICKAS 281
            RK+YWLR GIVVKVMN+KVG GK+YK KG +  VVE +I  V++++S   L++DQ+DLETVIP +G +V+IVNGRCRG+ A L+S+D   F   +R+   G   G ++D VEYED+CK++
Sbjct:  254 RKEYWLRPGIVVKVMNQKVGKGKFYKCKGVVESVVEHFIARVRLIESEKVLQIDQDDLETVIPKVGSDVIIVNGRCRGSAAELLSIDVRNFCVKLRVKD-GKRRGQVLDAVEYEDVCKSA 372          
BLAST of mRNA_H-elongata_contig62057.13769.1 vs. uniprot
Match: UPI00053FD039 (DNA/RNA-binding protein KIN17 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FD039)

HSP 1 Score: 136 bits (343), Expect = 6.930e-34
Identity = 85/179 (47.49%), Postives = 118/179 (65.92%), Query Frame = 0
Query:  102 GKGQGKGKKSVMEALMEQERAKKAAKGAQEKAL-KDGEEKEEKEETGPKQYVGTGGGAADGRKDYWLRGGIVVKVMNKKVGGGKYYKKKGRLRKVVERYIGEVKMLDSGDRLRVDQEDLETVIPAIGGEVVIVNGRCRGARATLVSLDTEAFAASVRITSVGPDTGVLIDGVEYEDICK 279
            GK +G+G K V E ++E E+ KK AK     A+ K   E+  KE+   K+ +         RKDYWL  G++VKVM+KK+    YYKKKG ++KV+++Y+GE++MLD+   LRVDQ +LETVIP IGG V IVNG  RG++A L+S+DT+ F A V+I   G   G ++  V+YEDICK
Sbjct:  225 GKEKGEGLKDVFEDVVEGEKEKKRAKHGDSSAVGKSALEELIKEDEKAKERLN--------RKDYWLCEGVIVKVMSKKLADKGYYKKKGTVKKVIDKYVGEIEMLDTKHVLRVDQAELETVIPQIGGLVRIVNGAYRGSKARLLSIDTDKFCAKVQIEK-GLYEGRVLQAVDYEDICK 394          
BLAST of mRNA_H-elongata_contig62057.13769.1 vs. uniprot
Match: A0A7S0LIS5_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LIS5_9EUKA)

HSP 1 Score: 127 bits (318), Expect = 5.020e-33
Identity = 65/119 (54.62%), Postives = 86/119 (72.27%), Query Frame = 0
Query:  162 RKDYWLRGGIVVKVMNKKVGGGKYYKKKGRLRKVVERYIGEVKMLDSGDRLRVDQEDLETVIPAIGGEVVIVNGRCRGARATLVSLDTEAFAASVRITSVGP-DTGVLIDGVEYEDICK 279
            R +YWL  GIVVKVMNKK+  GKYYK+KG + KVVE  +  V+M  S D ++V+QEDLETVIP+ GG V++VNG  RG+RA L++++ + F   VRI S  P   G  +DGV+YED+CK
Sbjct:    9 RSEYWLHKGIVVKVMNKKLREGKYYKQKGVVEKVVEADVAHVRMSTSADLIKVEQEDLETVIPSEGGRVLLVNGPHRGSRAKLLAINVDDFCVKVRIGSAEPFGAGRELDGVDYEDVCK 127          
BLAST of mRNA_H-elongata_contig62057.13769.1 vs. uniprot
Match: UPI000B8D1743 (KIN17-like protein n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8D1743)

HSP 1 Score: 134 bits (337), Expect = 5.740e-33
Identity = 91/199 (45.73%), Postives = 119/199 (59.80%), Query Frame = 0
Query:   90 GVEMHARNAELKGKGQGKGKKSVMEALMEQERAKKAAK-------GAQEKALKDGEEKEE--KEETGPKQYVGTGGGAADGRKDYWLRGGIVVKVMNKKVGGGKYYKKKGRLRKVVERYIGEVKMLDSGDRLRVDQEDLETVIPAIGGEVVIVNGRCRGARATLVSLDTEAFAASVRITSVGPDTGVLIDGVEYEDICK 279
            G  + +   ++ G+ +G+  K + EA  E ER  +  K       G  EK  K     EE  KEE   K+           RKDYWL  GI+VKVM+K +    YYK+KG +RKV+++Y+GE++MLDS   LRVDQE+LETVIP IGG V IVNG  RG+ A L+S+DT+ F A V+I   G   G L+ GVEYEDICK
Sbjct:  212 GFSLGSAGKQITGREKGESSKWIFEAEQENERKVRTEKRKASENFGKSEKEKKSVSALEELMKEEEKAKER--------SNRKDYWLFEGIIVKVMSKALAEKGYYKQKGVVRKVIDKYVGEIEMLDSKHILRVDQEELETVIPQIGGLVKIVNGAYRGSTAKLLSVDTDKFCAKVQIEK-GIYDGRLLKGVEYEDICK 401          
BLAST of mRNA_H-elongata_contig62057.13769.1 vs. uniprot
Match: A0A388LKR3_CHABU (KN17_SH3 domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LKR3_CHABU)

HSP 1 Score: 127 bits (318), Expect = 6.760e-33
Identity = 66/120 (55.00%), Postives = 83/120 (69.17%), Query Frame = 0
Query:  162 RKDYWLRGGIVVKVMNKKVGGGKYYKKKGRLRKVVERYIGEVKMLDSGDRLRVDQEDLETVIPAIGGEVVIVNGRCRGARATLVSLDTEAFAASVRITSVGPDTGVLIDGVEYEDICKAS 281
            RKDYWL  G++VKVM+K +    YYK KG + KVV +Y+GE+KMLD GD LRVDQ +LETV+P IGG V +VNG  RG  A L+ ++ E F A VRI   G   G ++  VEYEDICK +
Sbjct:   18 RKDYWLSEGLIVKVMSKALKEKGYYKMKGVVEKVVGKYVGEIKMLDGGDVLRVDQAELETVLPQIGGRVRVVNGAYRGEHAILLGIEPEKFCAKVRIEK-GRFDGRVLPAVEYEDICKVA 136          
BLAST of mRNA_H-elongata_contig62057.13769.1 vs. uniprot
Match: A0A2U1KGW9_ARTAN (DNA/RNA-binding protein Kin17, conserved region n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1KGW9_ARTAN)

HSP 1 Score: 131 bits (330), Expect = 6.930e-33
Identity = 67/120 (55.83%), Postives = 90/120 (75.00%), Query Frame = 0
Query:  162 RKDYWLRGGIVVKVMNKKVGGGKYYKKKGRLRKVVERYIGEVKMLDSGDRLRVDQEDLETVIPAIGGEVVIVNGRCRGARATLVSLDTEAFAASVRITSVGPDTGVLIDGVEYEDICKAS 281
            RKDYWL  GIVVKVM+K +    YYK+KG +RKV+++Y+GE++M++S  +LRVDQE+LETVIP IGG V +VNG  RG+ A L+S++TE F A V+I   G   G +I  +EYEDICK +
Sbjct:  176 RKDYWLCEGIVVKVMSKDLADKGYYKQKGVVRKVIDKYVGEIEMIESKHKLRVDQEELETVIPQIGGVVRVVNGAYRGSNARLLSVNTEKFCAKVQIEK-GVYDGRVIQAIEYEDICKVA 294          
BLAST of mRNA_H-elongata_contig62057.13769.1 vs. uniprot
Match: A0A2P2P0M6_RHIMU (KN17_SH3 domain-containing protein n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2P0M6_RHIMU)

HSP 1 Score: 126 bits (316), Expect = 1.060e-32
Identity = 66/118 (55.93%), Postives = 85/118 (72.03%), Query Frame = 0
Query:  162 RKDYWLRGGIVVKVMNKKVGGGKYYKKKGRLRKVVERYIGEVKMLDSGDRLRVDQEDLETVIPAIGGEVVIVNGRCRGARATLVSLDTEAFAASVRITSVGPDTGVLIDGVEYEDICK 279
            RKDYWL  GI+VKVM+K +    YYK+KG ++KV+++Y+GE++ML+    LRVDQE+LETVIP IGG V IVNG  RG+ A LV +D E F A V+I   G   G ++  VEYEDICK
Sbjct:   13 RKDYWLCEGIIVKVMSKSLADKGYYKQKGVVKKVIDKYVGEIEMLEKKHLLRVDQEELETVIPQIGGLVRIVNGAYRGSNARLVGVDAEKFCAKVQIEK-GIYDGRVLKAVEYEDICK 129          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig62057.13769.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQN7_9PHAE1.190e-8155.22Kin17_mid domain-containing protein n=2 Tax=Ectoca... [more]
A0A835Z894_9STRA2.800e-3760.16Antigenic determinant of recA protein n=1 Tax=Trib... [more]
A0A6G0WJF6_9STRA1.220e-3459.17C2H2-type domain-containing protein n=1 Tax=Aphano... [more]
A0A7S2E1F3_9STRA4.470e-3454.17Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
UPI00053FD0396.930e-3447.49DNA/RNA-binding protein KIN17 n=1 Tax=Beta vulgari... [more]
A0A7S0LIS5_9EUKA5.020e-3354.62Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
UPI000B8D17435.740e-3345.73KIN17-like protein n=1 Tax=Carica papaya TaxID=364... [more]
A0A388LKR3_CHABU6.760e-3355.00KN17_SH3 domain-containing protein n=1 Tax=Chara b... [more]
A0A2U1KGW9_ARTAN6.930e-3355.83DNA/RNA-binding protein Kin17, conserved region n=... [more]
A0A2P2P0M6_RHIMU1.060e-3255.93KN17_SH3 domain-containing protein n=1 Tax=Rhizoph... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 112..132
NoneNo IPR availableGENE3D2.30.30.140coord: 170..223
e-value: 2.7E-23
score: 83.8
IPR041330KN17, SH3-like C-terminal domainPFAMPF18131KN17_SH3coord: 162..215
e-value: 6.9E-23
score: 80.5
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 224..281
e-value: 3.3E-17
score: 64.4
IPR037321KIN17-like proteinPANTHERPTHR12805KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOGcoord: 107..280

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig62057contigH-elongata_contig62057:2177..3491 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig62057.13769.1mRNA_H-elongata_contig62057.13769.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig62057 2177..3491 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig62057.13769.1 ID=prot_H-elongata_contig62057.13769.1|Name=mRNA_H-elongata_contig62057.13769.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=287bp
RTIEKLVQAARVRDESRGEVSGPSGPTELRREEGQESLRIGLKTNAATFV
PGAGHGLVSAGETLLSAAAGSGAKRPRVSGAFGQAGDSGGVEMHARNAEL
KGKGQGKGKKSVMEALMEQERAKKAAKGAQEKALKDGEEKEEKEETGPKQ
YVGTGGGAADGRKDYWLRGGIVVKVMNKKVGGGKYYKKKGRLRKVVERYI
GEVKMLDSGDRLRVDQEDLETVIPAIGGEVVIVNGRCRGARATLVSLDTE
AFAASVRITSVGPDTGVLIDGVEYEDICKASPVEGG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041330KN17_SH3
IPR014722Rib_L2_dom2
IPR037321KIN17-like