prot_H-elongata_contig61979.13762.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig61979.13762.1
Unique Nameprot_H-elongata_contig61979.13762.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length102
Homology
BLAST of mRNA_H-elongata_contig61979.13762.1 vs. uniprot
Match: D8LTI7_ECTSI (Rhodanese domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTI7_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 2.220e-44
Identity = 80/101 (79.21%), Postives = 91/101 (90.10%), Query Frame = 0
Query:    2 FPYTRFAGTADAAVVDGYVSLGFAIKRGVVDPENGLEGPLLVLSTRTVSLDRLDLTVSNCRMAWLINLLTKLFASTISTYVCRALQQQLDAHASDLLGAIN 102
            FPYT   GTADA VVDGYVSLGF+IKRG+VD E G+EGPLLVLSTRTV+LDRL LTV+NCRMAWLINLLT+LF+STISTYVCR+LQ+Q+D HAS LLG +N
Sbjct:  945 FPYTYGNGTADATVVDGYVSLGFSIKRGIVDREKGIEGPLLVLSTRTVTLDRLGLTVANCRMAWLINLLTRLFSSTISTYVCRSLQEQVDGHASALLGTVN 1045          
BLAST of mRNA_H-elongata_contig61979.13762.1 vs. uniprot
Match: A0A835YIM8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIM8_9STRA)

HSP 1 Score: 105 bits (263), Expect = 2.020e-24
Identity = 52/97 (53.61%), Postives = 74/97 (76.29%), Query Frame = 0
Query:    2 FPYTRFAGTADAAVVDGYVSLGFAIKRGVVDPENGLEGPLLVLSTRTVSLDRLDLTVSNCRMAWLINLLTKLFASTISTYVCRALQQQLDAHASDLL 98
            FPY    GTADA VV+G V +GF++KRG +    G+EGPLLV+S+RT++++ L ++V+N R+AWL+NLL  LF+ TI  YVCR+L+  LD +AS+LL
Sbjct:  921 FPYGSGTGTADAMVVNGSVRIGFSLKRGTL---GGVEGPLLVMSSRTITMEALTVSVANTRLAWLLNLLVSLFSETIKEYVCRSLKDTLDKNASELL 1014          
BLAST of mRNA_H-elongata_contig61979.13762.1 vs. uniprot
Match: A0A7S1R939_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1R939_ALECA)

HSP 1 Score: 58.5 bits (140), Expect = 8.190e-8
Identity = 41/114 (35.96%), Postives = 60/114 (52.63%), Query Frame = 0
Query:    2 FPYTRFAGTADAAVVDGYVSLGFAIKRGVVDPENGLEG-PLLVLSTRTVSLDRLDLTVS------------NCRMAWLINLLTKLFASTISTYVCRALQQQLDAHASDLLGAIN 102
            FP+   +G ADA      VS GF +  G   P +  EG P+LV+S+R VS++ L+L VS               +A +IN L+ LFA+ +  Y C+ +   LD H   L+GA+N
Sbjct:  393 FPFIEGSGVADAKAERMRVSFGFKLAPG---PSS--EGRPVLVMSSRAVSMENLELWVSADKDAEIGQMVAQSSLAMIINPLSYLFANVLKDYACQKIASHLDNHLGSLVGALN 501          
BLAST of mRNA_H-elongata_contig61979.13762.1 vs. uniprot
Match: A0A813HX46_POLGL (Hypothetical protein (Fragment) n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HX46_POLGL)

HSP 1 Score: 54.3 bits (129), Expect = 2.620e-6
Identity = 35/101 (34.65%), Postives = 53/101 (52.48%), Query Frame = 0
Query:    2 FPYTRFAGTADAAVVDGYVSLGFAIKRGVVDPENGLEGPLLVLSTRTVSLDRLDLTVSNCRMAWLINLLTKLFASTISTYVCRALQQQLDAHASDLLGAIN 102
            FP+      ADA      V   F +K GV    NG + P LV+S+R+V +D L+L V     A ++N L+ LFA  + +Y C+ +  QLD     L+ ++N
Sbjct:  925 FPFLTADCIADAKAERMSVGFAFKLKPGV----NGKQ-PELVMSSRSVHMDHLELWVGETNYAVVVNALSFLFADVLKSYACQKIADQLDEQMEVLVASLN 1020          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61979.13762.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LTI7_ECTSI2.220e-4479.21Rhodanese domain-containing protein n=2 Tax=Ectoca... [more]
A0A835YIM8_9STRA2.020e-2453.61Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1R939_ALECA8.190e-835.96Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A813HX46_POLGL2.620e-634.65Hypothetical protein (Fragment) n=2 Tax=Polarella ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017943Bactericidal permeability-increasing protein, alpha/beta domain superfamilySUPERFAMILY55394Bactericidal permeability-increasing protein, BPIcoord: 35..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig61979contigH-elongata_contig61979:88..1201 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig61979.13762.1mRNA_H-elongata_contig61979.13762.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig61979 67..1201 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig61979.13762.1 ID=prot_H-elongata_contig61979.13762.1|Name=mRNA_H-elongata_contig61979.13762.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=102bp
MFPYTRFAGTADAAVVDGYVSLGFAIKRGVVDPENGLEGPLLVLSTRTVS
LDRLDLTVSNCRMAWLINLLTKLFASTISTYVCRALQQQLDAHASDLLGA
IN
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017943Bactericidal_perm-incr_a/b_dom