prot_H-elongata_contig61975.13761.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig61975.13761.1
Unique Nameprot_H-elongata_contig61975.13761.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length348
Homology
BLAST of mRNA_H-elongata_contig61975.13761.1 vs. uniprot
Match: D8LAT1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAT1_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 1.050e-39
Identity = 136/366 (37.16%), Postives = 188/366 (51.37%), Query Frame = 0
Query:    1 QAISTLLKEELDKIKASSESDRQGALLKKLQQVERRSGGLCNPDLLEKVVRSS----SCDKAPTPVLSTTPVSPAEPSRSALSSASRTSASRGSGDMMEVGLRTPVRGGAPMFFDIGSNDARSEGAGTAGDDVPWADDMLCGASRRRHAAMLRSRARALAKGLARLMTGVSSDLHGIASRLPPWEENDDNSEDEDEASFAENTTYIRNSIWVKIMTRPTGDGSAEPASRDQILRRERREG--NHIRLALEETGSLQ-SRSSFVSVDASESSSLGRLS----------------EPNASDTAASSTVPEPLMPTSTTSGRPGDLEAARRLDWKLDAEELSLIRREEERVMKPLVLARLLAAGATLDC 343
            +AIS+LLK E+DK+ A++E +R+G +LKK +QVERRSGGLCNPDLLE +VRS+    S + +P+                +     + +A R    ++ V +    RGG       GS  A S GA     DVPWA+DMLC + R+RHAA+L++R RALAKGLAR++ GVS+D   +ASRLPPWEE +D+ ED+      E     R      I + PT +                     +++  A  E G+ + S SS  +  A+  SS G  +                 P +    A+                  +   +RR DWKL A+ELSLI++EEERVMKP VL  LLA GA+L C
Sbjct:  172 KAISSLLKSEMDKVVAAAEKERKGEMLKKFKQVERRSGGLCNPDLLENIVRSTGGEGSGESSPSAXXXXXXXXXXXXPPRSPDHKGQDAAIRALNSLVVVDVEKDERGGIAGVG--GSGGAVSSGA----QDVPWAEDMLCRSVRKRHAAVLKTRGRALAKGLARMLKGVSNDXXXVASRLPPWEECEDDDEDKPTPQ-EEGAELDRIRSRGNIFSAPTHEXXXXXXXXXXXXXXXXXXXXXSYVSAATSEDGNERLSLSSDTAPTAASISSNGSAAIRSPVAAMAXXXXXXXSPGSDAVPAAXXXXXXXXXXXXXXXXAANCVRSRRQDWKLSAQELSLIKKEEERVMKPDVLTTLLAKGASLGC 530          
BLAST of mRNA_H-elongata_contig61975.13761.1 vs. uniprot
Match: A0A6H5KYX3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYX3_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 1.120e-34
Identity = 126/367 (34.33%), Postives = 171/367 (46.59%), Query Frame = 0
Query:   11 LDKIKASSESDRQGALLKKLQQVERRSGGLCNPDLLEKVVRSS----SCDKAPTPVLSTTPVSPAEPSRSALSSASRTSASRGSGDMMEVGLRTPVRGGAPMFFDIGSNDARSEGAGTAGDDVPWADDMLCGASRRRHAAMLRSRARALAKGLARLMTGVSSDLHGIASRLPPWEENDDNSEDEDEASFAENTTYIRNSIWVKIMTRPTGDGSAEPASRDQILRRERREGNHIRLALEETGSLQSRSSFVSVDASESSSLGRLSEPNASDTAASSTVPEPLMPTSTTSGRP------------------------------GDLEAARRLDWKLDAEELSLIRREEERVMKPLVLARLLAAGATLDC 343
            +DK+ A++E +R+G +LKK +QVERRSGGLCNPDLLE +VRS+    S + +P+                +     + +A R    ++ V +    RGG       G       G  +   DVPWA+DMLC + R+RHAA+L++R RALAKGLAR++ GVS+DL G+ASRLPPWEE +D+ ED+     AE    IR+     I + PT +                                   S+  S D +E  SL   + P A+                                                     D   +RR DWKL A+ELSLI++EEERVMKP VL  LLA GA+L C
Sbjct:    1 MDKVVAAAEKERKGEMLKKFKQVERRSGGLCNPDLLENIVRSTGGEGSGESSPSAXXXXXXXXXXXXPPRSPDHKGQDAAIRALNSLVVVDVEKDERGGVAGVGGSGG------GVSSGAQDVPWAEDMLCRSVRKRHAAVLKTRGRALAKGLARMLKGVSNDLKGVASRLPPWEECEDDDEDKPXGGGAE-LERIRS--LGNIFSAPTHEXXXXXXXXXXXX-----------XXXXXXXXXSCVSAVTSEDGNERLSLSSDNAPTAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADCVNSRRQDWKLSAQELSLIKKEEERVMKPDVLTTLLAKGASLGC 347          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61975.13761.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LAT1_ECTSI1.050e-3937.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYX3_9PHAE1.120e-3434.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig61975contigH-elongata_contig61975:677..2958 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig61975.13761.1mRNA_H-elongata_contig61975.13761.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig61975 677..2958 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig61975.13761.1 ID=prot_H-elongata_contig61975.13761.1|Name=mRNA_H-elongata_contig61975.13761.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=348bp
QAISTLLKEELDKIKASSESDRQGALLKKLQQVERRSGGLCNPDLLEKVV
RSSSCDKAPTPVLSTTPVSPAEPSRSALSSASRTSASRGSGDMMEVGLRT
PVRGGAPMFFDIGSNDARSEGAGTAGDDVPWADDMLCGASRRRHAAMLRS
RARALAKGLARLMTGVSSDLHGIASRLPPWEENDDNSEDEDEASFAENTT
YIRNSIWVKIMTRPTGDGSAEPASRDQILRRERREGNHIRLALEETGSLQ
SRSSFVSVDASESSSLGRLSEPNASDTAASSTVPEPLMPTSTTSGRPGDL
EAARRLDWKLDAEELSLIRREEERVMKPLVLARLLAAGATLDCERRD*
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